Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is 108759789

Identifier: 108759789

GI number: 108759789

Start: 4948222

End: 4948986

Strand: Direct

Name: 108759789

Synonym: MXAN_4040

Alternate gene names: NA

Gene position: 4948222-4948986 (Clockwise)

Preceding gene: 108761884

Following gene: 108763331

Centisome position: 54.14

GC content: 69.8

Gene sequence:

>765_bases
TTGCCATGGCGCGGAACTAGCACCAGGGTAAGGCGGCTTTCAACGCGCAAGCGTTTACGCACCCCTGTCTGGAGGCACAT
GCACCCCGCCCTGCCCCTATTGCTCCTGGCCCTCACGGGCGCAGCGTCCACCCCTAATGCCCGAGGACTGAACACCCAGG
GCTTCCGGCTGTACCAGGCGGGGCGCTACCCAGAGGCCCTGGAGCGCTTCCAGGCGTCCGCCCGGGAGTCCCCGGACTAT
GCGCTGGCCCACTACAACCTGGCCGCCACCCTGGGGATGCTCCGCAAGCAGGGGAAGGTCTGCGAGTACAGCGCCCACCG
GGACGTCATCGTCGAGCACCTCACCCAGGCGGTGAAGCTGGATGCCCGGCGGCTCACCCGCGCGAAGGAGGACGCGGACT
TCACCCCCATCCGGGACACCCTGGGCTGGCAGAAGCTGCTGGGCCGCAGCCCGGCGAGGGAGGCGGATGTCCCCGTGCTG
CTGCGCGAGGTGTCCTGGTTCGGCCCGGGCGTGGGCGTCTACGGCACCACCCAGGGGCTGCGCTTCGGCCCCTCCGGCAG
GGTCACCCTGTGGACGAAGGAGGTGGGCGACGACGGGACGCCCCGCCAGAAGGAAACGCGGGGCCGCTACACGGTGCGAG
GCAGGCAGGTAGCGCTTCGGTTGAATGGCCGTGCGCCGCTGGAAGGCACGCTGACGGAGTCGGGCGCGCTCACCTTCCCC
GGCCTGGAGACGTTCACCGACTCACCTTCGGAATGCGAGGCGTAA

Upstream 100 bases:

>100_bases
AAGTCCACCGTGCCGCTGGTGGAGAGGACCTTGAGCTCGTCGATCTTCTTTTCCAGCTCAATCAGGGGGCGCTCGAACTC
GAGCACATAGCTGGTACCGG

Downstream 100 bases:

>100_bases
GCCCCCGCGGGCCTCCGTGCCTTCCAGCCATCAGTCGCGACGTGAGCCACGCTCGCTTTCAGATACGGCCCGCGCAACCC
CCTTGGCACCCATGGCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MPWRGTSTRVRRLSTRKRLRTPVWRHMHPALPLLLLALTGAASTPNARGLNTQGFRLYQAGRYPEALERFQASARESPDY
ALAHYNLAATLGMLRKQGKVCEYSAHRDVIVEHLTQAVKLDARRLTRAKEDADFTPIRDTLGWQKLLGRSPAREADVPVL
LREVSWFGPGVGVYGTTQGLRFGPSGRVTLWTKEVGDDGTPRQKETRGRYTVRGRQVALRLNGRAPLEGTLTESGALTFP
GLETFTDSPSECEA

Sequences:

>Translated_254_residues
MPWRGTSTRVRRLSTRKRLRTPVWRHMHPALPLLLLALTGAASTPNARGLNTQGFRLYQAGRYPEALERFQASARESPDY
ALAHYNLAATLGMLRKQGKVCEYSAHRDVIVEHLTQAVKLDARRLTRAKEDADFTPIRDTLGWQKLLGRSPAREADVPVL
LREVSWFGPGVGVYGTTQGLRFGPSGRVTLWTKEVGDDGTPRQKETRGRYTVRGRQVALRLNGRAPLEGTLTESGALTFP
GLETFTDSPSECEA
>Mature_253_residues
PWRGTSTRVRRLSTRKRLRTPVWRHMHPALPLLLLALTGAASTPNARGLNTQGFRLYQAGRYPEALERFQASARESPDYA
LAHYNLAATLGMLRKQGKVCEYSAHRDVIVEHLTQAVKLDARRLTRAKEDADFTPIRDTLGWQKLLGRSPAREADVPVLL
REVSWFGPGVGVYGTTQGLRFGPSGRVTLWTKEVGDDGTPRQKETRGRYTVRGRQVALRLNGRAPLEGTLTESGALTFPG
LETFTDSPSECEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28294; Mature: 28162

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPWRGTSTRVRRLSTRKRLRTPVWRHMHPALPLLLLALTGAASTPNARGLNTQGFRLYQA
CCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEC
GRYPEALERFQASARESPDYALAHYNLAATLGMLRKQGKVCEYSAHRDVIVEHLTQAVKL
CCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
DARRLTRAKEDADFTPIRDTLGWQKLLGRSPAREADVPVLLREVSWFGPGVGVYGTTQGL
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
RFGPSGRVTLWTKEVGDDGTPRQKETRGRYTVRGRQVALRLNGRAPLEGTLTESGALTFP
EECCCCCEEEEECCCCCCCCCCCHHHCCCEEEECEEEEEEECCCCCCCCCCCCCCCEECC
GLETFTDSPSECEA
CCHHHCCCCCCCCC
>Mature Secondary Structure 
PWRGTSTRVRRLSTRKRLRTPVWRHMHPALPLLLLALTGAASTPNARGLNTQGFRLYQA
CCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEC
GRYPEALERFQASARESPDYALAHYNLAATLGMLRKQGKVCEYSAHRDVIVEHLTQAVKL
CCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
DARRLTRAKEDADFTPIRDTLGWQKLLGRSPAREADVPVLLREVSWFGPGVGVYGTTQGL
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
RFGPSGRVTLWTKEVGDDGTPRQKETRGRYTVRGRQVALRLNGRAPLEGTLTESGALTFP
EECCCCCEEEEECCCCCCCCCCCHHHCCCEEEECEEEEEEECCCCCCCCCCCCCCCEECC
GLETFTDSPSECEA
CCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA