| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759769
Identifier: 108759769
GI number: 108759769
Start: 55489
End: 56160
Strand: Reverse
Name: 108759769
Synonym: MXAN_0047
Alternate gene names: NA
Gene position: 56160-55489 (Counterclockwise)
Preceding gene: 108756919
Following gene: 108759532
Centisome position: 0.61
GC content: 57.29
Gene sequence:
>672_bases TTGAAGAGGACGGCGAGGTCGACGAGGAATCATGAAGCGCCGTCGCCACCGGCGGGTCCGGCATCTCACTCAGGATGGGG TTCGTCCGTGAAGTACTTCGTCTTCAAGGTCATGGCGGAAGAAGATGGATTCATTGATGCCTATCCACCTGGAAGCCCAG CAGACTGGAAGTTCGAAAAAGGCATCAGTCTCGCCAAGGATTTTCCAAAGGGTGGCGAGGTTGCCTTTTCCGATAACTAC CCGGACGACCGGAACCTCTATGACTTCCAGCCGAACTTGATGAGTGACCTGCTCATCTCGGGACGTGCGCGTCAGTTCAT CGAATCGCTCGGCATCACCAACGCCGAATGGCTTCCGGTCGTGGTCAAGGACCATGAAGGTGCAGTGGTCGGTCCCGACT ACGCCTTCCTCAACCTCCTCGGTGCCGAAGACGCCATCGACATGGCCCGTTCGGTCTACGAGATGAATCACATCTCCAAG GACCAAATCGGGCTTATCGAACAACTGGCTCTCAGCCCCGACAGAATCAGCCCTGATGCCAAGATGTTCCGATGCAGGAC GTATCGTCGGCTCATCCTCGTTCGCGAAGACACCCTCGCGGCATTCCAACGCGCGGGACTGACAGGTTTCAGAACCTACG ACGCCGAGGGATGGGACGGCGTGGAACTCTGA
Upstream 100 bases:
>100_bases CAGGTCAGCCTGTCTGATGAAAAGGATGCCATCCGCTTCACGGACGAAGAGGGAGAGCCAGTGCTCGCCTTGATCGGCGC CATGCGTTTCCTACGTTGGC
Downstream 100 bases:
>100_bases GATCCTTTCGGGCCCAAGGAGACCGATACCCCATGAAATACTTCGTCTTCAAGGTCCAAGGCATCGATGCAGGCTTCATC GATGAATATCCCCGGGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MKRTARSTRNHEAPSPPAGPASHSGWGSSVKYFVFKVMAEEDGFIDAYPPGSPADWKFEKGISLAKDFPKGGEVAFSDNY PDDRNLYDFQPNLMSDLLISGRARQFIESLGITNAEWLPVVVKDHEGAVVGPDYAFLNLLGAEDAIDMARSVYEMNHISK DQIGLIEQLALSPDRISPDAKMFRCRTYRRLILVREDTLAAFQRAGLTGFRTYDAEGWDGVEL
Sequences:
>Translated_223_residues MKRTARSTRNHEAPSPPAGPASHSGWGSSVKYFVFKVMAEEDGFIDAYPPGSPADWKFEKGISLAKDFPKGGEVAFSDNY PDDRNLYDFQPNLMSDLLISGRARQFIESLGITNAEWLPVVVKDHEGAVVGPDYAFLNLLGAEDAIDMARSVYEMNHISK DQIGLIEQLALSPDRISPDAKMFRCRTYRRLILVREDTLAAFQRAGLTGFRTYDAEGWDGVEL >Mature_223_residues MKRTARSTRNHEAPSPPAGPASHSGWGSSVKYFVFKVMAEEDGFIDAYPPGSPADWKFEKGISLAKDFPKGGEVAFSDNY PDDRNLYDFQPNLMSDLLISGRARQFIESLGITNAEWLPVVVKDHEGAVVGPDYAFLNLLGAEDAIDMARSVYEMNHISK DQIGLIEQLALSPDRISPDAKMFRCRTYRRLILVREDTLAAFQRAGLTGFRTYDAEGWDGVEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24854; Mature: 24854
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTARSTRNHEAPSPPAGPASHSGWGSSVKYFVFKVMAEEDGFIDAYPPGSPADWKFEK CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCEEECCCCCCCCCCCHHC GISLAKDFPKGGEVAFSDNYPDDRNLYDFQPNLMSDLLISGRARQFIESLGITNAEWLPV CCHHHHCCCCCCCEEECCCCCCCCCCEECCCHHHHHHHHCCHHHHHHHHHCCCCCCEEEE VVKDHEGAVVGPDYAFLNLLGAEDAIDMARSVYEMNHISKDQIGLIEQLALSPDRISPDA EEECCCCCEECCCHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHH KMFRCRTYRRLILVREDTLAAFQRAGLTGFRTYDAEGWDGVEL HHHHHHHHHEEEEEECHHHHHHHHCCCCCEEEECCCCCCCCCC >Mature Secondary Structure MKRTARSTRNHEAPSPPAGPASHSGWGSSVKYFVFKVMAEEDGFIDAYPPGSPADWKFEK CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCEEECCCCCCCCCCCHHC GISLAKDFPKGGEVAFSDNYPDDRNLYDFQPNLMSDLLISGRARQFIESLGITNAEWLPV CCHHHHCCCCCCCEEECCCCCCCCCCEECCCHHHHHHHHCCHHHHHHHHHCCCCCCEEEE VVKDHEGAVVGPDYAFLNLLGAEDAIDMARSVYEMNHISKDQIGLIEQLALSPDRISPDA EEECCCCCEECCCHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHH KMFRCRTYRRLILVREDTLAAFQRAGLTGFRTYDAEGWDGVEL HHHHHHHHHEEEEEECHHHHHHHHCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA