| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is ydjX [C]
Identifier: 108759759
GI number: 108759759
Start: 4629588
End: 4630361
Strand: Direct
Name: ydjX [C]
Synonym: MXAN_3851
Alternate gene names: 108759759
Gene position: 4629588-4630361 (Clockwise)
Preceding gene: 108758275
Following gene: 108760480
Centisome position: 50.65
GC content: 70.03
Gene sequence:
>774_bases GTGGGGCCGCGGGGGAGATACGGCGTGGCGCAGTCGGTGAAGACCTGGCTCCGGGTGTTGGCCCCGATGCTCGTCTCAAT GGGGGGGCTTGTCGCACTCCGGCTGCTCGGGCCGGACTTCGTCGACCAGCAGCGCCTCGCCAGTTGGTTGGAGCCCTTCG GGAAGTGGGCGCCTATTGCATACATCGGCTTCCTTGCCATCCGGCCCGTGACACTGCTTCCGGGTCAGCTGCTGACGGCC GTGGGCGGGATGATGTTTGGCACGCTCGCAGCGACCCTCTATTCACTAACGGGCGGCTTGCTGTCGGGCCTGCTGCTTTT CGCGGCGGCGCGCAAGTTGGGCACCGGGCTCATGAAGCGCCTGGCTGGCAGCAAGTACCCCGCACTGGTGCGGGCGGCGA GGCGGCATGACTTCCTCTTCGCCTTCACCGCCTGCATCAATCCGCTGTGCCCCACCGACGTGATGCTGGCGGCGGCGGCG GCGAGCGGAGCGCGGCTGACGCCCACGCTGGCCGGCGCCTTGATTGGCACCCTTCCTGGCACCTTCCTCACGGCGCAGCT CGGCAGTGGTCTGGCCCAGGGCCGCACGACGATGACGGCGGTCGCCGCCGCGGGCCTGGTGGTGTCGCTGGTGCTCGGCG CCTACATCGGGCGGCGCTTCTACAAGGAGCTCAACGAAGACGCGCCGGAGCCACAGCCACGCGCGGAGCCGCCGCCGCCC GCGCGACGCCCCATCCGTCATTCCGAAGAGACGGCCAAGCCCGCGGCGGTCTAG
Upstream 100 bases:
>100_bases GGCGGGCTGCCCGGCCGGACGCTTTCATGTTGGAAACACCCCACTGCACATTGCGGATTCCCGAAGCCACCTTCACTTTC AGGCCCACGGCGCGGCGGAA
Downstream 100 bases:
>100_bases GCATGCATGGGGGGCTCCGGGAAGAGCTCCACGCGGCGCTGCACGCGCTCCCCTGGGCCCACGCCCGTGGGCAGTGAGAC GGCCCGGGCCATCTCCTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MGPRGRYGVAQSVKTWLRVLAPMLVSMGGLVALRLLGPDFVDQQRLASWLEPFGKWAPIAYIGFLAIRPVTLLPGQLLTA VGGMMFGTLAATLYSLTGGLLSGLLLFAAARKLGTGLMKRLAGSKYPALVRAARRHDFLFAFTACINPLCPTDVMLAAAA ASGARLTPTLAGALIGTLPGTFLTAQLGSGLAQGRTTMTAVAAAGLVVSLVLGAYIGRRFYKELNEDAPEPQPRAEPPPP ARRPIRHSEETAKPAAV
Sequences:
>Translated_257_residues MGPRGRYGVAQSVKTWLRVLAPMLVSMGGLVALRLLGPDFVDQQRLASWLEPFGKWAPIAYIGFLAIRPVTLLPGQLLTA VGGMMFGTLAATLYSLTGGLLSGLLLFAAARKLGTGLMKRLAGSKYPALVRAARRHDFLFAFTACINPLCPTDVMLAAAA ASGARLTPTLAGALIGTLPGTFLTAQLGSGLAQGRTTMTAVAAAGLVVSLVLGAYIGRRFYKELNEDAPEPQPRAEPPPP ARRPIRHSEETAKPAAV >Mature_256_residues GPRGRYGVAQSVKTWLRVLAPMLVSMGGLVALRLLGPDFVDQQRLASWLEPFGKWAPIAYIGFLAIRPVTLLPGQLLTAV GGMMFGTLAATLYSLTGGLLSGLLLFAAARKLGTGLMKRLAGSKYPALVRAARRHDFLFAFTACINPLCPTDVMLAAAAA SGARLTPTLAGALIGTLPGTFLTAQLGSGLAQGRTTMTAVAAAGLVVSLVLGAYIGRRFYKELNEDAPEPQPRAEPPPPA RRPIRHSEETAKPAAV
Specific function: Unknown
COG id: COG0398
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27003; Mature: 26872
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPRGRYGVAQSVKTWLRVLAPMLVSMGGLVALRLLGPDFVDQQRLASWLEPFGKWAPIA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHH YIGFLAIRPVTLLPGQLLTAVGGMMFGTLAATLYSLTGGLLSGLLLFAAARKLGTGLMKR HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGSKYPALVRAARRHDFLFAFTACINPLCPTDVMLAAAAASGARLTPTLAGALIGTLPG HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCH TFLTAQLGSGLAQGRTTMTAVAAAGLVVSLVLGAYIGRRFYKELNEDAPEPQPRAEPPPP HHHHHHHHCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ARRPIRHSEETAKPAAV CCCCCCCCHHCCCCCCC >Mature Secondary Structure GPRGRYGVAQSVKTWLRVLAPMLVSMGGLVALRLLGPDFVDQQRLASWLEPFGKWAPIA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHH YIGFLAIRPVTLLPGQLLTAVGGMMFGTLAATLYSLTGGLLSGLLLFAAARKLGTGLMKR HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGSKYPALVRAARRHDFLFAFTACINPLCPTDVMLAAAAASGARLTPTLAGALIGTLPG HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCH TFLTAQLGSGLAQGRTTMTAVAAAGLVVSLVLGAYIGRRFYKELNEDAPEPQPRAEPPPP HHHHHHHHCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ARRPIRHSEETAKPAAV CCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA