| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is dmpA
Identifier: 108759705
GI number: 108759705
Start: 3336256
End: 3337515
Strand: Reverse
Name: dmpA
Synonym: MXAN_2861
Alternate gene names: NA
Gene position: 3337515-3336256 (Counterclockwise)
Preceding gene: 108760834
Following gene: 108762671
Centisome position: 36.52
GC content: 69.76
Gene sequence:
>1260_bases ATGAACCCGTTCCGTCTCCCTTTGCGCCTGGGCGTCGTGTGCTGTCTGTTGCTGTGGTCCCTTCCAGCGGAAGCGCAGTC CACCCAGGCGAGGCCCCGCGCCCGCGACCTGGGCATCACCTTCGGCGGCCAATCCGGCCCGAACAACGCCATCACCGACG TGTCCGGCGTGGAGGTGGGCCACACGACGCTGATTTCGGGTGACACCCGCGGCCCGCGCGGCAAGGGCGCGGTGCGCACC GGCGTCACCGCCGTGCTGCCTCGCGGCAAGGACGGTGTGTCCGAGGACGTCTTCGCCGCCATCTACGCCCTCAACGGCAA TGGCGAGATGACGGGCTCCCACTGGCTCACCGAATCCGGCCAGCTCGCCGGCCCCGTGATGCTCACCAACACCAATGACG TGGGCACCGTGCGCGACTCCGTCATCTCCTGGGCGATGAAGCGCGGATTGGAGTGGGAGCTGGGGCTGCCCGTCGTCGCG GAGACGTGGGATGGCCTGCTGAATGACATCTACGGCTTCCACGTGAAGGCCACGCACGCCCACCGCGCGCTCGACAGCGC CAAGAGTGGTCCCGTCGCGGAGGGCTCGGTGGGCGGCGGCACGGGGATGGTGTGCCACAGCTTCAAGGCCGGCATCGGCA CGGCGTCACGCAAGCTGCCCGAGTCGGAGGGCGGCTACACCGTGGGCGTGCTGTTGCAGTGCAACTACGGCGCGCGGCAC CTCTTCACCGTGGAGGGCGTGCCCGTGGGCGAGGAGATCAACGACCTGCGCCCCTGCTACACCGGGCCCAAGAAGCCGAG CCCCGGCATGTTCAAGGACTTGCCAGCCTGCTCGGCGTCGCGCGGCGACACCCAGCCCCGCACGCCCGAGGGCGCCGGCT CCATCATCGTGGTGGTGGCGACGGACGCACCGCTGCTGCCGCATCAACTGGAGCGGCTGGCGAAGCGCGTGCCGCTGGGC ATCGGGAAGATGGGAGGCCTGGGGGGCAACTCCTCCGGCGACATCTTCGTGGCCTTCTCCACGCAGCGGCTGAAGCCCCC CACCGGCACGGACGTGGCCGGTGTCTCGACGCTCGACAACGAGCGAATGACGCCGCTCTTCGAGGCCACCATCCAGGCCA CGCAGGAGGCCATCCTCAACTCGATGCTGGCCTCCGACACGATGACGGGCGCGGAGAGCAGCCGCGTCTACGGCCTGCCC CAGGACCGGCTCATCCAGGTGATGAAGAAGTACGGCCGGCTGGCGCCCCCCGCGCCGTGA
Upstream 100 bases:
>100_bases GGTGAGGGGACTCAGGGAGATACTGGCAGGGAGATTACGGACATGGCCAGACGGGACCACCAGTTGGGGGCCTGACGCGG TCGCGATATGACGTCACGCC
Downstream 100 bases:
>100_bases CGCCGCGCGCGCCTCAGTCCGCGCGCTGAGGCGTGGGCGCGGCGGCCCCACGCTGCCGCGCCTGGACCCACGCCTGCACC CGCGCCTCGAGGATGTCCAG
Product: D-aminopeptidase
Products: NA
Alternate protein names: D-Aminopeptidase; Aminopeptidase DmpA; L-Aminopeptidase/D-Esterase; Aminopeptidase; Peptidase S; T4 Family Peptidase; Peptidase T4 Family; Family; L-Aminopeptidase DmpA; S58 Family Peptidase; D-Amino Peptidase Dmpa Family; Serine Peptidase; L-Aminopeptidase Dmpa; Aminopeptidase DpmA; D-Alanine-D-Alanine Ligase / Aminopeptidase; Peptidase Family; Aminopeptidase-Like Protein; D-Aminopeptidease; D-AMINO PEPTIDASE DmpA Family; L-Aminopeptidase D-Ala-Esterase/Amidase
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MNPFRLPLRLGVVCCLLLWSLPAEAQSTQARPRARDLGITFGGQSGPNNAITDVSGVEVGHTTLISGDTRGPRGKGAVRT GVTAVLPRGKDGVSEDVFAAIYALNGNGEMTGSHWLTESGQLAGPVMLTNTNDVGTVRDSVISWAMKRGLEWELGLPVVA ETWDGLLNDIYGFHVKATHAHRALDSAKSGPVAEGSVGGGTGMVCHSFKAGIGTASRKLPESEGGYTVGVLLQCNYGARH LFTVEGVPVGEEINDLRPCYTGPKKPSPGMFKDLPACSASRGDTQPRTPEGAGSIIVVVATDAPLLPHQLERLAKRVPLG IGKMGGLGGNSSGDIFVAFSTQRLKPPTGTDVAGVSTLDNERMTPLFEATIQATQEAILNSMLASDTMTGAESSRVYGLP QDRLIQVMKKYGRLAPPAP
Sequences:
>Translated_419_residues MNPFRLPLRLGVVCCLLLWSLPAEAQSTQARPRARDLGITFGGQSGPNNAITDVSGVEVGHTTLISGDTRGPRGKGAVRT GVTAVLPRGKDGVSEDVFAAIYALNGNGEMTGSHWLTESGQLAGPVMLTNTNDVGTVRDSVISWAMKRGLEWELGLPVVA ETWDGLLNDIYGFHVKATHAHRALDSAKSGPVAEGSVGGGTGMVCHSFKAGIGTASRKLPESEGGYTVGVLLQCNYGARH LFTVEGVPVGEEINDLRPCYTGPKKPSPGMFKDLPACSASRGDTQPRTPEGAGSIIVVVATDAPLLPHQLERLAKRVPLG IGKMGGLGGNSSGDIFVAFSTQRLKPPTGTDVAGVSTLDNERMTPLFEATIQATQEAILNSMLASDTMTGAESSRVYGLP QDRLIQVMKKYGRLAPPAP >Mature_419_residues MNPFRLPLRLGVVCCLLLWSLPAEAQSTQARPRARDLGITFGGQSGPNNAITDVSGVEVGHTTLISGDTRGPRGKGAVRT GVTAVLPRGKDGVSEDVFAAIYALNGNGEMTGSHWLTESGQLAGPVMLTNTNDVGTVRDSVISWAMKRGLEWELGLPVVA ETWDGLLNDIYGFHVKATHAHRALDSAKSGPVAEGSVGGGTGMVCHSFKAGIGTASRKLPESEGGYTVGVLLQCNYGARH LFTVEGVPVGEEINDLRPCYTGPKKPSPGMFKDLPACSASRGDTQPRTPEGAGSIIVVVATDAPLLPHQLERLAKRVPLG IGKMGGLGGNSSGDIFVAFSTQRLKPPTGTDVAGVSTLDNERMTPLFEATIQATQEAILNSMLASDTMTGAESSRVYGLP QDRLIQVMKKYGRLAPPAP
Specific function: Unknown
COG id: COG3191
COG function: function code EQ; L-aminopeptidase/D-esterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43965; Mature: 43965
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPFRLPLRLGVVCCLLLWSLPAEAQSTQARPRARDLGITFGGQSGPNNAITDVSGVEVG CCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHCCEEECCCCCCCCCCCCCCCCEEC HTTLISGDTRGPRGKGAVRTGVTAVLPRGKDGVSEDVFAAIYALNGNGEMTGSHWLTESG CEEEEECCCCCCCCCCCHHCCCEEECCCCCCCCCCCEEEEEEEECCCCCCCCCEEECCCC QLAGPVMLTNTNDVGTVRDSVISWAMKRGLEWELGLPVVAETWDGLLNDIYGFHVKATHA CCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHCCEEEEHHH HRALDSAKSGPVAEGSVGGGTGMVCHSFKAGIGTASRKLPESEGGYTVGVLLQCNYGARH HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCEEEEEEEEECCCCCE LFTVEGVPVGEEINDLRPCYTGPKKPSPGMFKDLPACSASRGDTQPRTPEGAGSIIVVVA EEEECCCCCCCHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEE TDAPLLPHQLERLAKRVPLGIGKMGGLGGNSSGDIFVAFSTQRLKPPTGTDVAGVSTLDN CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECCC ERMTPLFEATIQATQEAILNSMLASDTMTGAESSRVYGLPQDRLIQVMKKYGRLAPPAP CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNPFRLPLRLGVVCCLLLWSLPAEAQSTQARPRARDLGITFGGQSGPNNAITDVSGVEVG CCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHCCEEECCCCCCCCCCCCCCCCEEC HTTLISGDTRGPRGKGAVRTGVTAVLPRGKDGVSEDVFAAIYALNGNGEMTGSHWLTESG CEEEEECCCCCCCCCCCHHCCCEEECCCCCCCCCCCEEEEEEEECCCCCCCCCEEECCCC QLAGPVMLTNTNDVGTVRDSVISWAMKRGLEWELGLPVVAETWDGLLNDIYGFHVKATHA CCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHCCEEEEHHH HRALDSAKSGPVAEGSVGGGTGMVCHSFKAGIGTASRKLPESEGGYTVGVLLQCNYGARH HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCEEEEEEEEECCCCCE LFTVEGVPVGEEINDLRPCYTGPKKPSPGMFKDLPACSASRGDTQPRTPEGAGSIIVVVA EEEECCCCCCCHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEE TDAPLLPHQLERLAKRVPLGIGKMGGLGGNSSGDIFVAFSTQRLKPPTGTDVAGVSTLDN CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECCC ERMTPLFEATIQATQEAILNSMLASDTMTGAESSRVYGLPQDRLIQVMKKYGRLAPPAP CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA