| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759686
Identifier: 108759686
GI number: 108759686
Start: 362336
End: 364003
Strand: Reverse
Name: 108759686
Synonym: MXAN_0307
Alternate gene names: NA
Gene position: 364003-362336 (Counterclockwise)
Preceding gene: 108762336
Following gene: 108763158
Centisome position: 3.98
GC content: 69.0
Gene sequence:
>1668_bases ATGAGTCCGTCTCAGAAGCACATCACCCCTGAGGACGTGGCCACGGGCTGGCGCGACGCGCTGGCCCTGTGGGACGTGCG CGTGCAGCTCAGCCCACCCGAGCCGCACGTGGACTTCCACCCCGACGCCAGCCACGCCCAGGAGCCGCTCGCATACATCG ACCTGGTGAAGCGCCAGGTCTTCGTCAACTTCAAGCTCCTGGAGGCCATGGAGGCCACGGGCAGCCTCACGGCGGTGCTG GCGCATGAAATCGGCCACCACGCGCGCTTCCCGCACACGCTGGGCTGGGACGCGGAGCTGCGCGTGCAGGAGCAGCGGCT GGTTCCCGGCCTGAAGCAATCCCTCACCAACCTCTTCTATGACTTGCAGGTGAACGAGGTGGTGGGCCGCACGTACGCGG AGGCGCTGTGCGCGGTGTACCGGGGCTTCCAGCGCGTGCAGGGCGGCGAGATGTCGCCGCTGTTCTTCTTCTACCTGGCC ATCTACGAGGAGCTGTGGGGCCTGCCCCCTGGGAATCTGGTTCCCGCCGCGCAGCTCGAGCCGATGGAGCAGCGCTACCC CGGTGTTCGCGCCGAGGCGCGCATGTTCGCGCAGACCTTCTACGCGCTGCCCAGCGGCAAGCTCCAGTTCCTCTACTTCT GCGCCACCTTCATCCGCTACATCGAGAAGCCCGCGGACCTGGAGTTCAGCCTGCCGCTGGGCGGGGACGTCTCCGTGCCG GACGTGGACGACCTGGATGCCGCCATCCACGGCAGCAGTCGCTGGGACGACGCGCTGGACGAAGCGGAGGAGCGGGGCTG GCTGGCCCCCTTGAGCACCCGCTCGAAGGAGAAGGACGAGCTGGACTCCATCCACCGCGTCACCGAACACCTGCCCGGCA AGCAGGGCGGAAGGCTGCGACAGGCCCTGGTGGCGAAGCACTATCGGCGGCTGGTGGACCAGCACATCCTGAAGCTCCCC ACGACGCCGTCCCAGCCGGAGCCCTACCTGCGCACCACGCCCCAGGCGTGGGAGTACGGCGATGACCCGTCCAGCATCGA CTGGACGTTGACGGTGCTGTCCCAGGGCCACCTGGCCGCGGTGTCACCACTGCGCCGCGAGCTGGAGGCGGACCTGCCGC CCCCGTCCGAGCTGGGCGCGCCGTCCGTGGAAATCTACCTGGACACCAGCGGCTCCATGCCCAATCCGGAGCTGAGCCTC AACGCAATGACGCTCGCGGCCCAGGTGCTGTCCGCCTCCGCGCTGCGGAAGAAGGCCACGGTGCGCGGCATCGTGTACTC GCACGGCAACCCGCAGGTGTCGCCGTGGATGTACGACGAGGAGAAGGCGCGCGACTTCCTGCTGAGCTACATCGGCGGAG GCACGCAGTTCCCCTTCGACGTGATGGACGCGCTGTCACGCGAGCGGCCCGATGCGCTGCGCATCATCATCTCCGACAGC GACTTCCTCGCGAACGTCACCGCGGAGAGGCCCCTGGCGCCGGTGCTGGAGTCCATCCGGCGCTCGCGCCTCGTGGTGGC CATCCTCGCTCTTCCCGACGAACTCCGCGCCCGGCAGGCGCTGGCGCCGCTGCTGCGCGAGCGCCGTTTCCGGCTGGTGG TGGTGCGCTGGCCCTCCGACTTCGCGAAGGCGGCCGCCGACCTCGCCCAGGCATTGCTGGAGAATTGA
Upstream 100 bases:
>100_bases AGGACCCGCGCGCGGACGCGTGGTTCGCCACCCTGTCCAATGACTGGCGGGTGGTGGCCACGCTGCACACCTCCCAGCAC GTGCTGGTGTTCGTCCCGGA
Downstream 100 bases:
>100_bases GCCCCATGGCTTTCGACATCCGCGAGATTCAGACGCAGCTCGAGGCAGCCCCCATCGTGTCGCCGTATTCGCATGACCTG GCTCTCGCCATCATCTGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 555; Mature: 554
Protein sequence:
>555_residues MSPSQKHITPEDVATGWRDALALWDVRVQLSPPEPHVDFHPDASHAQEPLAYIDLVKRQVFVNFKLLEAMEATGSLTAVL AHEIGHHARFPHTLGWDAELRVQEQRLVPGLKQSLTNLFYDLQVNEVVGRTYAEALCAVYRGFQRVQGGEMSPLFFFYLA IYEELWGLPPGNLVPAAQLEPMEQRYPGVRAEARMFAQTFYALPSGKLQFLYFCATFIRYIEKPADLEFSLPLGGDVSVP DVDDLDAAIHGSSRWDDALDEAEERGWLAPLSTRSKEKDELDSIHRVTEHLPGKQGGRLRQALVAKHYRRLVDQHILKLP TTPSQPEPYLRTTPQAWEYGDDPSSIDWTLTVLSQGHLAAVSPLRRELEADLPPPSELGAPSVEIYLDTSGSMPNPELSL NAMTLAAQVLSASALRKKATVRGIVYSHGNPQVSPWMYDEEKARDFLLSYIGGGTQFPFDVMDALSRERPDALRIIISDS DFLANVTAERPLAPVLESIRRSRLVVAILALPDELRARQALAPLLRERRFRLVVVRWPSDFAKAAADLAQALLEN
Sequences:
>Translated_555_residues MSPSQKHITPEDVATGWRDALALWDVRVQLSPPEPHVDFHPDASHAQEPLAYIDLVKRQVFVNFKLLEAMEATGSLTAVL AHEIGHHARFPHTLGWDAELRVQEQRLVPGLKQSLTNLFYDLQVNEVVGRTYAEALCAVYRGFQRVQGGEMSPLFFFYLA IYEELWGLPPGNLVPAAQLEPMEQRYPGVRAEARMFAQTFYALPSGKLQFLYFCATFIRYIEKPADLEFSLPLGGDVSVP DVDDLDAAIHGSSRWDDALDEAEERGWLAPLSTRSKEKDELDSIHRVTEHLPGKQGGRLRQALVAKHYRRLVDQHILKLP TTPSQPEPYLRTTPQAWEYGDDPSSIDWTLTVLSQGHLAAVSPLRRELEADLPPPSELGAPSVEIYLDTSGSMPNPELSL NAMTLAAQVLSASALRKKATVRGIVYSHGNPQVSPWMYDEEKARDFLLSYIGGGTQFPFDVMDALSRERPDALRIIISDS DFLANVTAERPLAPVLESIRRSRLVVAILALPDELRARQALAPLLRERRFRLVVVRWPSDFAKAAADLAQALLEN >Mature_554_residues SPSQKHITPEDVATGWRDALALWDVRVQLSPPEPHVDFHPDASHAQEPLAYIDLVKRQVFVNFKLLEAMEATGSLTAVLA HEIGHHARFPHTLGWDAELRVQEQRLVPGLKQSLTNLFYDLQVNEVVGRTYAEALCAVYRGFQRVQGGEMSPLFFFYLAI YEELWGLPPGNLVPAAQLEPMEQRYPGVRAEARMFAQTFYALPSGKLQFLYFCATFIRYIEKPADLEFSLPLGGDVSVPD VDDLDAAIHGSSRWDDALDEAEERGWLAPLSTRSKEKDELDSIHRVTEHLPGKQGGRLRQALVAKHYRRLVDQHILKLPT TPSQPEPYLRTTPQAWEYGDDPSSIDWTLTVLSQGHLAAVSPLRRELEADLPPPSELGAPSVEIYLDTSGSMPNPELSLN AMTLAAQVLSASALRKKATVRGIVYSHGNPQVSPWMYDEEKARDFLLSYIGGGTQFPFDVMDALSRERPDALRIIISDSD FLANVTAERPLAPVLESIRRSRLVVAILALPDELRARQALAPLLRERRFRLVVVRWPSDFAKAAADLAQALLEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62144; Mature: 62013
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSQKHITPEDVATGWRDALALWDVRVQLSPPEPHVDFHPDASHAQEPLAYIDLVKRQV CCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHCHHHHHHHHHHHH FVNFKLLEAMEATGSLTAVLAHEIGHHARFPHTLGWDAELRVQEQRLVPGLKQSLTNLFY HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHCCHHHHHHHHHHH DLQVNEVVGRTYAEALCAVYRGFQRVQGGEMSPLFFFYLAIYEELWGLPPGNLVPAAQLE HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCC PMEQRYPGVRAEARMFAQTFYALPSGKLQFLYFCATFIRYIEKPADLEFSLPLGGDVSVP CHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCC DVDDLDAAIHGSSRWDDALDEAEERGWLAPLSTRSKEKDELDSIHRVTEHLPGKQGGRLR CCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHH QALVAKHYRRLVDQHILKLPTTPSQPEPYLRTTPQAWEYGDDPSSIDWTLTVLSQGHLAA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHH VSPLRRELEADLPPPSELGAPSVEIYLDTSGSMPNPELSLNAMTLAAQVLSASALRKKAT HHHHHHHHHCCCCCCHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VRGIVYSHGNPQVSPWMYDEEKARDFLLSYIGGGTQFPFDVMDALSRERPDALRIIISDS HEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEEECC DFLANVTAERPLAPVLESIRRSRLVVAILALPDELRARQALAPLLRERRFRLVVVRWPSD CHHHHCCCCCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEECCCH FAKAAADLAQALLEN HHHHHHHHHHHHHCC >Mature Secondary Structure SPSQKHITPEDVATGWRDALALWDVRVQLSPPEPHVDFHPDASHAQEPLAYIDLVKRQV CCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHCHHHHHHHHHHHH FVNFKLLEAMEATGSLTAVLAHEIGHHARFPHTLGWDAELRVQEQRLVPGLKQSLTNLFY HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHCCHHHHHHHHHHH DLQVNEVVGRTYAEALCAVYRGFQRVQGGEMSPLFFFYLAIYEELWGLPPGNLVPAAQLE HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCC PMEQRYPGVRAEARMFAQTFYALPSGKLQFLYFCATFIRYIEKPADLEFSLPLGGDVSVP CHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCC DVDDLDAAIHGSSRWDDALDEAEERGWLAPLSTRSKEKDELDSIHRVTEHLPGKQGGRLR CCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHH QALVAKHYRRLVDQHILKLPTTPSQPEPYLRTTPQAWEYGDDPSSIDWTLTVLSQGHLAA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHH VSPLRRELEADLPPPSELGAPSVEIYLDTSGSMPNPELSLNAMTLAAQVLSASALRKKAT HHHHHHHHHCCCCCCHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VRGIVYSHGNPQVSPWMYDEEKARDFLLSYIGGGTQFPFDVMDALSRERPDALRIIISDS HEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEEECC DFLANVTAERPLAPVLESIRRSRLVVAILALPDELRARQALAPLLRERRFRLVVVRWPSD CHHHHCCCCCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEECCCH FAKAAADLAQALLEN HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA