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The map label for this gene is hofB [C]

Identifier: 108759450

GI number: 108759450

Start: 867145

End: 869091

Strand: Reverse

Name: hofB [C]

Synonym: MXAN_0759

Alternate gene names: 108759450

Gene position: 869091-867145 (Counterclockwise)

Preceding gene: 108761919

Following gene: 108763189

Centisome position: 9.51

GC content: 71.29

Gene sequence:

>1947_bases
TTGAAACACCGGGCATCGGGAGCGCCCACTGCTTTTCCGCCCGGCCACGCTGGAAACCGCCGGTGGGCGGCCCCTGCCCC
AGAAAGCAGCCGGACAGGCGGGGCGGGTTCTTGGGCCCTGGGGCCAGAGCGCGCTAGCCTGGGTGGCGCCATGACGATGT
ACACCGAGTCACTCCGCGCGTTCCTCAAGCCCGTCCTGCCCTACATGGATGACGAGGCCGTGTCGGAAATCATGATCAAC
GGCCCGACCGACATCTGGATTGAGCGCAAGGGCCGGCTCACGAAAGTGGATGCATCGTTCACCGACGAAGGCCTGCTCGG
CGCCGCGCGCAACATGGCCCAGTTCGTCGGCCGCATGCTCAACGAAGAGCGCCCCCGCCTGGACGCGCGCCTTCCGGATG
GCAGCCGCATCCACGTGGTGATTCCGCCCATCGCGCGCAAGGGCACCACCATCTCCATCCGCAAGTTCTTCAAGGAGAAG
CTGACGGTCCAATCCTTGATGAAGTTCGGGTCGCTCACGCCGCAGATGGCGCGCCTCATCGAGGCCGGCATCGCCACCAA
GCTCAACATGCTGGTGGCCGGCGGCACGGGCTCCGGCAAGACGACGCTGCTCAACATCGTGTCGTCGCTCATCCCCGACG
AGGAGCGCATCCTCACCATCGAGGACTCGGCCGAGCTCCAGCTCAACCAGTCCCACGTCGTGCCCTTCGAAAGCCGGCCG
CCCGACAAGTTCGGCAAGGGCGCGGTGGACATGGGCGATTTGCTCCACTCCGCGCTGCGTCTGCGCCCCGACCGCATCGT
CGTCGGTGAGGTGCGCGGCGGCGAGGCCTTCCACCTCATGCAGGCCATGAACACCGGCCACGGCGGCTCGCTGGCCACCA
CGCACGCCAACACGCCCACGGACACGCTGCGCCGCATCGAGTCGCTGTGCCTCATGTCCGGCGTGGAGCTGCCCATGGTG
GCCGTGCGCGCCCAGGTGGCCAGCGCCATCAACTTCATCATCTGCTGCGAGCGCCTCCACGACGGCAGCCGCAAGACGAT
TGCCCTGTCGGAGGTGCTGCCCCTCAACGAGAAGGGCGACTACCGCACCCAGGACATCTTCGTCTTCACGCCCGTCACCA
AGGACGAGGACGACCACATCCTGGGCTACCACGCGCCCACCGGCATCATCCCCAACTTCGTCAGCAAGGCGCGCGCGTAC
GGCTTCCACGACCTGGACGAGTCCTTCTTCGACCCGGCCACCTACGGCCTGCCGCCGCCGCCCACCTTCCACGCGGGCGA
GTCGTACTCGGTGCGCTGGGCCCCGTCCCTGAAGCACCGCGAGCAGGGAAGGCCAGACCCGGACCACTTCAAGCAGGAGT
GGGCCGCCTTCGAGCAGCGCCTCAAGCAGGACGCCCGCGACGCGAAGGCCGGCAAGGCCGCCGCCGCGCCGCCTCCGCCT
CCCGCGCCGGCCGTGCAGGTGCAGGTGCCCGCGAGTCACCCCACCCCGCCGCCCTCGGCGCGCGCCCGGCCGCCGGAGCC
TCCGCCGGCCGTGAAGCCCGCAACGCCCGTGGCCCGGCCCGCCGCCGCCACGCCGCCGCGCCCGCCGCCCGCCATGGACG
ACGACGCGACGCCGCCGCCCACGCGCAACCCCTTCGCGGAGGCCCCCGAGGAGACGCGCACCGCCATCCCCACCGAGGCC
AAGGTCGAGGTCTCCGAGGACCTGCTCGCGGAGGATGACGGCCCCAGCACGGTGCCCCCGCGCCGGCCGCCGCCCTTCAC
CCCGCCTTCGCGGGCGCCCTCGCCCAACCTGGCCACCGGCGCACGGCCAGCCCTGGGCGCGCGCCGCCCCCCGCCGTCCC
GCCCCGCGCCGGAGTCCGATGAAGACGACGACAGCACCCAGGGCTCGAATGGCGGCTCCGAGAAGACCCAGATTCGCCCG
GCCCCGTCGGAGCGGCCCCGGCGCTGA

Upstream 100 bases:

>100_bases
GGAACGACGGCGACGCCAACGCCGCGCGCAGCTCCTGCTTCCAGTCTTCCGGCAGCCCTTCCGCGAGCACGAACGCCTCC
CTTTTCCGACGGCGGCGGCA

Downstream 100 bases:

>100_bases
AGCCATGTCCCGGCCCGGCGCGTCGGAAACGACCCCGGGCCGGTGGGGCGCCCTCCCACCACACGCGCTCCGCCCCGGCG
GGTTTCACCCGAAGCACGAG

Product: type II/IV secretion system ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 648; Mature: 648

Protein sequence:

>648_residues
MKHRASGAPTAFPPGHAGNRRWAAPAPESSRTGGAGSWALGPERASLGGAMTMYTESLRAFLKPVLPYMDDEAVSEIMIN
GPTDIWIERKGRLTKVDASFTDEGLLGAARNMAQFVGRMLNEERPRLDARLPDGSRIHVVIPPIARKGTTISIRKFFKEK
LTVQSLMKFGSLTPQMARLIEAGIATKLNMLVAGGTGSGKTTLLNIVSSLIPDEERILTIEDSAELQLNQSHVVPFESRP
PDKFGKGAVDMGDLLHSALRLRPDRIVVGEVRGGEAFHLMQAMNTGHGGSLATTHANTPTDTLRRIESLCLMSGVELPMV
AVRAQVASAINFIICCERLHDGSRKTIALSEVLPLNEKGDYRTQDIFVFTPVTKDEDDHILGYHAPTGIIPNFVSKARAY
GFHDLDESFFDPATYGLPPPPTFHAGESYSVRWAPSLKHREQGRPDPDHFKQEWAAFEQRLKQDARDAKAGKAAAAPPPP
PAPAVQVQVPASHPTPPPSARARPPEPPPAVKPATPVARPAAATPPRPPPAMDDDATPPPTRNPFAEAPEETRTAIPTEA
KVEVSEDLLAEDDGPSTVPPRRPPPFTPPSRAPSPNLATGARPALGARRPPPSRPAPESDEDDDSTQGSNGGSEKTQIRP
APSERPRR

Sequences:

>Translated_648_residues
MKHRASGAPTAFPPGHAGNRRWAAPAPESSRTGGAGSWALGPERASLGGAMTMYTESLRAFLKPVLPYMDDEAVSEIMIN
GPTDIWIERKGRLTKVDASFTDEGLLGAARNMAQFVGRMLNEERPRLDARLPDGSRIHVVIPPIARKGTTISIRKFFKEK
LTVQSLMKFGSLTPQMARLIEAGIATKLNMLVAGGTGSGKTTLLNIVSSLIPDEERILTIEDSAELQLNQSHVVPFESRP
PDKFGKGAVDMGDLLHSALRLRPDRIVVGEVRGGEAFHLMQAMNTGHGGSLATTHANTPTDTLRRIESLCLMSGVELPMV
AVRAQVASAINFIICCERLHDGSRKTIALSEVLPLNEKGDYRTQDIFVFTPVTKDEDDHILGYHAPTGIIPNFVSKARAY
GFHDLDESFFDPATYGLPPPPTFHAGESYSVRWAPSLKHREQGRPDPDHFKQEWAAFEQRLKQDARDAKAGKAAAAPPPP
PAPAVQVQVPASHPTPPPSARARPPEPPPAVKPATPVARPAAATPPRPPPAMDDDATPPPTRNPFAEAPEETRTAIPTEA
KVEVSEDLLAEDDGPSTVPPRRPPPFTPPSRAPSPNLATGARPALGARRPPPSRPAPESDEDDDSTQGSNGGSEKTQIRP
APSERPRR
>Mature_648_residues
MKHRASGAPTAFPPGHAGNRRWAAPAPESSRTGGAGSWALGPERASLGGAMTMYTESLRAFLKPVLPYMDDEAVSEIMIN
GPTDIWIERKGRLTKVDASFTDEGLLGAARNMAQFVGRMLNEERPRLDARLPDGSRIHVVIPPIARKGTTISIRKFFKEK
LTVQSLMKFGSLTPQMARLIEAGIATKLNMLVAGGTGSGKTTLLNIVSSLIPDEERILTIEDSAELQLNQSHVVPFESRP
PDKFGKGAVDMGDLLHSALRLRPDRIVVGEVRGGEAFHLMQAMNTGHGGSLATTHANTPTDTLRRIESLCLMSGVELPMV
AVRAQVASAINFIICCERLHDGSRKTIALSEVLPLNEKGDYRTQDIFVFTPVTKDEDDHILGYHAPTGIIPNFVSKARAY
GFHDLDESFFDPATYGLPPPPTFHAGESYSVRWAPSLKHREQGRPDPDHFKQEWAAFEQRLKQDARDAKAGKAAAAPPPP
PAPAVQVQVPASHPTPPPSARARPPEPPPAVKPATPVARPAAATPPRPPPAMDDDATPPPTRNPFAEAPEETRTAIPTEA
KVEVSEDLLAEDDGPSTVPPRRPPPFTPPSRAPSPNLATGARPALGARRPPPSRPAPESDEDDDSTQGSNGGSEKTQIRP
APSERPRR

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR011451
- InterPro:   IPR003586
- InterPro:   IPR003587
- InterPro:   IPR006141
- InterPro:   IPR001482 [H]

Pfam domain/function: PF07591 DUF1557; PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 69885; Mature: 69885

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHRASGAPTAFPPGHAGNRRWAAPAPESSRTGGAGSWALGPERASLGGAMTMYTESLRA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHH
FLKPVLPYMDDEAVSEIMINGPTDIWIERKGRLTKVDASFTDEGLLGAARNMAQFVGRML
HHHHHHCCCCHHHHHHHEECCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
NEERPRLDARLPDGSRIHVVIPPIARKGTTISIRKFFKEKLTVQSLMKFGSLTPQMARLI
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
EAGIATKLNMLVAGGTGSGKTTLLNIVSSLIPDEERILTIEDSAELQLNQSHVVPFESRP
HHHHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCEECCCCCCC
PDKFGKGAVDMGDLLHSALRLRPDRIVVGEVRGGEAFHLMQAMNTGHGGSLATTHANTPT
CHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCCEEEECCCCCH
DTLRRIESLCLMSGVELPMVAVRAQVASAINFIICCERLHDGSRKTIALSEVLPLNEKGD
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCCCCCC
YRTQDIFVFTPVTKDEDDHILGYHAPTGIIPNFVSKARAYGFHDLDESFFDPATYGLPPP
CCCCEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCC
PTFHAGESYSVRWAPSLKHREQGRPDPDHFKQEWAAFEQRLKQDARDAKAGKAAAAPPPP
CCCCCCCCCEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PAPAVQVQVPASHPTPPPSARARPPEPPPAVKPATPVARPAAATPPRPPPAMDDDATPPP
CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TRNPFAEAPEETRTAIPTEAKVEVSEDLLAEDDGPSTVPPRRPPPFTPPSRAPSPNLATG
CCCCCCCCCHHHHHCCCCCCEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ARPALGARRPPPSRPAPESDEDDDSTQGSNGGSEKTQIRPAPSERPRR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
>Mature Secondary Structure
MKHRASGAPTAFPPGHAGNRRWAAPAPESSRTGGAGSWALGPERASLGGAMTMYTESLRA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHH
FLKPVLPYMDDEAVSEIMINGPTDIWIERKGRLTKVDASFTDEGLLGAARNMAQFVGRML
HHHHHHCCCCHHHHHHHEECCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
NEERPRLDARLPDGSRIHVVIPPIARKGTTISIRKFFKEKLTVQSLMKFGSLTPQMARLI
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
EAGIATKLNMLVAGGTGSGKTTLLNIVSSLIPDEERILTIEDSAELQLNQSHVVPFESRP
HHHHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCEECCCCCCC
PDKFGKGAVDMGDLLHSALRLRPDRIVVGEVRGGEAFHLMQAMNTGHGGSLATTHANTPT
CHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCCEEEECCCCCH
DTLRRIESLCLMSGVELPMVAVRAQVASAINFIICCERLHDGSRKTIALSEVLPLNEKGD
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCCCCCC
YRTQDIFVFTPVTKDEDDHILGYHAPTGIIPNFVSKARAYGFHDLDESFFDPATYGLPPP
CCCCEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCC
PTFHAGESYSVRWAPSLKHREQGRPDPDHFKQEWAAFEQRLKQDARDAKAGKAAAAPPPP
CCCCCCCCCEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PAPAVQVQVPASHPTPPPSARARPPEPPPAVKPATPVARPAAATPPRPPPAMDDDATPPP
CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TRNPFAEAPEETRTAIPTEAKVEVSEDLLAEDDGPSTVPPRRPPPFTPPSRAPSPNLATG
CCCCCCCCCHHHHHCCCCCCEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ARPALGARRPPPSRPAPESDEDDDSTQGSNGGSEKTQIRPAPSERPRR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]