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The map label for this gene is yjfR [C]

Identifier: 108759407

GI number: 108759407

Start: 1640270

End: 1641109

Strand: Direct

Name: yjfR [C]

Synonym: MXAN_1394

Alternate gene names: 108759407

Gene position: 1640270-1641109 (Clockwise)

Preceding gene: 108761556

Following gene: 108758695

Centisome position: 17.95

GC content: 70.36

Gene sequence:

>840_bases
ATGGATATGCGGACGAAGCTCATGGCAGTGGTGGCGGGCGCGGCAATGGCCTTCGGCGGAACGGCAGCGGCGCAGGGCAC
CCCGGCGCCCGGCAAGGTCGCGGCCACCAAGGCCCCGGCGGCGGCCACCCGCGGCAAGACGGAGGTGACGTGGTGGGGGC
ACGCGGCCTTCGTGATTCGCAGCCCAGGCGGCGCGGTGATTGCCATCGACCCCTGGCTCTCCAACCCCAAGGCCCCGAAG
GGCGCCGCGCAGCCGGAGGCGCTGGACGCCATCCTCCTCACCCACGGCCATTTCGACCACGTGGGCGAGGCCAAGGCGCT
GGCCGAGAAGACGGGCGCCAAGGTCTATGGCTCCTTCGAGCTCATCAACCTGCTGGGGCTCCCGGAGGCCCAGTCCGTGG
GCGCCAACGCGGGCGGCACCTTCCAGGTGAAGGACGTCACGTTCCACCTGGTAGAGGCGGTTCACTCCAGCAGCTACGCC
GCGGACCCGAAGTCGCCGGCGCAGTACGCGGGCGCGCCCGTGGGCTACGTGCTGGAAATCGACAAGGGGCCTACGCTGTA
CCACGCGGGTGACACCGGACCCTTCGAGGGCATGTCGCTCATCGCCACCCAGTTCAAGCCCTCCGTGGCCCTGCTCCCCA
TTGGCGGCCACTTCACCATGGGCCCCGCGGAGGCGGCCCAGGCGGTGCGGCTCCTGAAGGTCAAGAGCGTGATTCCCATG
CACTACGGCACCTTCCCGCTGCTTCAGGGCACCCCGGACGCGCTGACCGGCGAGCTGAAGAAGCTGCGCAATACGGCCAA
GGTGGTGGTCCCGGAGCCCGGCGCGACGACCGCGCTGTAG

Upstream 100 bases:

>100_bases
GGCCCTTGAATGGCCGCCCGGTCAGTGTCAGGTGGCAATCCGGCCGTGGGGGGCGTGTCACCACGGTGGCGGCAGGTCTT
CACCTCGAAAGCAGGAGTGG

Downstream 100 bases:

>100_bases
GCACCGGGCGCGGATGGTTGGGTCCGGTAGAAGTGGCGGTTCTACGCCCGCTGACTTCCGGGCCTTGACCCTGTCCCGTG
GCCGAGTGGAAACCAGAATG

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MDMRTKLMAVVAGAAMAFGGTAAAQGTPAPGKVAATKAPAAATRGKTEVTWWGHAAFVIRSPGGAVIAIDPWLSNPKAPK
GAAQPEALDAILLTHGHFDHVGEAKALAEKTGAKVYGSFELINLLGLPEAQSVGANAGGTFQVKDVTFHLVEAVHSSSYA
ADPKSPAQYAGAPVGYVLEIDKGPTLYHAGDTGPFEGMSLIATQFKPSVALLPIGGHFTMGPAEAAQAVRLLKVKSVIPM
HYGTFPLLQGTPDALTGELKKLRNTAKVVVPEPGATTAL

Sequences:

>Translated_279_residues
MDMRTKLMAVVAGAAMAFGGTAAAQGTPAPGKVAATKAPAAATRGKTEVTWWGHAAFVIRSPGGAVIAIDPWLSNPKAPK
GAAQPEALDAILLTHGHFDHVGEAKALAEKTGAKVYGSFELINLLGLPEAQSVGANAGGTFQVKDVTFHLVEAVHSSSYA
ADPKSPAQYAGAPVGYVLEIDKGPTLYHAGDTGPFEGMSLIATQFKPSVALLPIGGHFTMGPAEAAQAVRLLKVKSVIPM
HYGTFPLLQGTPDALTGELKKLRNTAKVVVPEPGATTAL
>Mature_279_residues
MDMRTKLMAVVAGAAMAFGGTAAAQGTPAPGKVAATKAPAAATRGKTEVTWWGHAAFVIRSPGGAVIAIDPWLSNPKAPK
GAAQPEALDAILLTHGHFDHVGEAKALAEKTGAKVYGSFELINLLGLPEAQSVGANAGGTFQVKDVTFHLVEAVHSSSYA
ADPKSPAQYAGAPVGYVLEIDKGPTLYHAGDTGPFEGMSLIATQFKPSVALLPIGGHFTMGPAEAAQAVRLLKVKSVIPM
HYGTFPLLQGTPDALTGELKKLRNTAKVVVPEPGATTAL

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0173 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1394_MYXXD (Q1DCH2)

Other databases:

- EMBL:   CP000113
- RefSeq:   YP_629651.1
- ProteinModelPortal:   Q1DCH2
- STRING:   Q1DCH2
- GeneID:   4100991
- GenomeReviews:   CP000113_GR
- KEGG:   mxa:MXAN_1394
- TIGR:   MXAN_1394
- eggNOG:   COG2220
- HOGENOM:   HBG741314
- OMA:   FPIIDQT
- BioCyc:   MXAN246197:MXAN_1394-MONOMER
- HAMAP:   MF_00457
- InterPro:   IPR001279
- InterPro:   IPR022877
- SMART:   SM00849

Pfam domain/function: PF00753 Lactamase_B

EC number: NA

Molecular weight: Translated: 28648; Mature: 28648

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMRTKLMAVVAGAAMAFGGTAAAQGTPAPGKVAATKAPAAATRGKTEVTWWGHAAFVIR
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHCCCCEEEEEECEEEEEEE
SPGGAVIAIDPWLSNPKAPKGAAQPEALDAILLTHGHFDHVGEAKALAEKTGAKVYGSFE
CCCCEEEEECCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCCHHHHHHHHCCCEEEECEE
LINLLGLPEAQSVGANAGGTFQVKDVTFHLVEAVHSSSYAADPKSPAQYAGAPVGYVLEI
EEEECCCCCHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEEE
DKGPTLYHAGDTGPFEGMSLIATQFKPSVALLPIGGHFTMGPAEAAQAVRLLKVKSVIPM
CCCCEEEECCCCCCCCCHHHEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC
HYGTFPLLQGTPDALTGELKKLRNTAKVVVPEPGATTAL
CCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MDMRTKLMAVVAGAAMAFGGTAAAQGTPAPGKVAATKAPAAATRGKTEVTWWGHAAFVIR
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHCCCCEEEEEECEEEEEEE
SPGGAVIAIDPWLSNPKAPKGAAQPEALDAILLTHGHFDHVGEAKALAEKTGAKVYGSFE
CCCCEEEEECCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCCHHHHHHHHCCCEEEECEE
LINLLGLPEAQSVGANAGGTFQVKDVTFHLVEAVHSSSYAADPKSPAQYAGAPVGYVLEI
EEEECCCCCHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEEE
DKGPTLYHAGDTGPFEGMSLIATQFKPSVALLPIGGHFTMGPAEAAQAVRLLKVKSVIPM
CCCCEEEECCCCCCCCCHHHEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC
HYGTFPLLQGTPDALTGELKKLRNTAKVVVPEPGATTAL
CCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA