| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is ppc [H]
Identifier: 108759396
GI number: 108759396
Start: 5703279
End: 5705948
Strand: Reverse
Name: ppc [H]
Synonym: MXAN_4571
Alternate gene names: 108759396
Gene position: 5705948-5703279 (Counterclockwise)
Preceding gene: 108759542
Following gene: 108762061
Centisome position: 62.43
GC content: 72.06
Gene sequence:
>2670_bases ATGGCCCGACTGCGTGCCGTGGATCAGCCGCTGCGCCGGGATGTCCGCCTGCTTGGCCGGCTCCTGGGAGAAGTCCTCGT CGAACAGGAAGGGCAGGCGCTCTTCGACCTGGAAGAAGAAGTGCGCCGCCTCGCCATCCAGCGCCGCCGAGGCCCCGTGG CCGGCCGGCGCGCGGTGGCGGCCGAGCTGGCGGAGGTGCTCCAACGCCTGCCGCTGGAACGGGCCGAGCCGGTGCTGCGC GCCTTCTCCGTCTACTTCCAGTTGGTGAACCTGGCGGAGCAGCACCACCGCATCCGCCGCGCCCGCACCCACGCGGAGGT CGCGTCCGCCAAGCCCCAGCGTGGTTCGCTGGAGGCTACGCTGCAAGTGCTCAAGGAAGCGGGCATCCCCGCGGAGCGCG TGCGCGAGGCCATGCGCACCATGCGCGTGACGCTGACGCTCACCGCGCACCCCACGCAGGCCGTGCGCCGCACGCTGCTG GAGAAGCTCTACCGCATGGCGGGCCTGCTGGAGGAGCGGGACCGCTGCGAGCTGACGCCGCGCGAGTCCTCGGTGAACCT GGCGCTGCTGCGCGAGGAAATCACCCTCCTGTGGCAGACGGACGAGCTGCGCCGCGAGCGCCCCACCGTGGGTGACGAGG TGAAGAACGTCCTCTGGTACGTGGAGGAGGTGCTCGCCGACGAGCTGTCCCTGCTCCCCGAGCTGCTGGACTGGGCCTTC GAGCGCGCCTACGGCGAGCCGCTGGGGCCGGTGGACACGCCCGTGCGCATCCACTCATGGGTGGGCGGGGACATGGATGG CAACCCGCTGGTGACGCCCGACGTGTTCGCGGACACGCTGCGCGCGCACCGGGCCCGAGGACTGCGACGGTTGCTGCTTG ACCTGGAGCGGTTGGGCGGGCGGCTGTCCCAGTCGGCGCGTCACGCGAAGCCGTCCGAGGAGCTGCTGAGCTCGGTGGCG AAGGACGCGGAGGAGCTGCCCGACACCGAGCGCCGCTACGGTCCCCGTACCCCGGGCGAGCCGCTGCGGCACAAGCTGCG CTTCATGGAGGAGCGGCTGCACCGTGCGCTCCACTACGTGACGCAGCAGCGCGCCGGGACGAGCGTCCCCATGCCGCAGG GCGCCTACCGCACGCCGGAGGCCTTGCTGGCGGACCTGGACGTGCTGGGCCGCGCGCTGGAGGCGTCGAAGGGCACGCAC GCGGGACTTCGCGACGTGCGGCAGGTCCGGGAGCGGGTGCTCGCGCTGGGACTGTCGTTGGCGGAGCTGGAGGTGCGCGC GCCGGCCGAGGACGCGGTGAGCGCGGCGGGCTCGTTCAACGGGGGCCCGGCGCCGACGGAAGGTGGGGCGCGGCTCCTGG AAGTGCTGGCGCGGCTGAAGGAGGCCCAGTCGGAGTCGGGTGAGTCCGCGTGCCGCACGCTCATCCTCAGCATGGCCAGC ACCGCCGAGGACGTGCTCGCGGCCTTCCGCTGCTTGAAGCACGCGGGCCTGTGGGACGAGAAGCGGGGCTGCGCCACGGC GAATGTGGTGCCGCTGTTCGAGCAGTTGGGCGCGCTGGACTCGGGCCCGGACGTGCTGCGCACGCTCTTCGCGGACGCGG AGTACCGCAAGCACCTGGACGTGCGCGGTGGCCAGGAAGTGATGGTGGGCTACAGCGACTCCGGCAAGGAGGTGGGGCTC CTGGCGGCCAGCGCGGCGCTGTACCGCGCGCAGGTGGCGCTCACGGAGGTGTCTCGTGAGGCGGGCGTCCCGCTGCGACT CTTCCACGGCCGCGGCGAGTCCGTGGCGCGTGGCGGTGGTCCCGCGCAGGAGGCGATTCTCGCGCTGCCGCCGGGCGCGG TGGCGGGTGGCTACAAGGCGACGGAGCAGGGCGAGGCGCTGGACCACAAGTACGCGCGCCCGGAGCTGGCGCGGCGCACG GTGGAGCTCATCCTGGGCGGCGTGCTGCTGCACACGCTGGATGCGCAGCCGCGACCGGAGCCCGAGGCCGAGCGCACCTT CCGCACCGTGTTCGACACGCTGGCGGAGACGGGGCGCAAGGCGTATCGCGCCCTGGTGTGGGAGGACCCACGGTTCCTGG AGTTCTTCACCGCCGCGACGCCGGTGGAGGAGATTGCGTCGCTGCCCATCGGCTCGCGCCCCAGCAAGCGCAGGGCGGGA GGCCTGGACACGCTGCGCGCGATTCCGTGGGTCTTCGCCTGGACGCAAAACCGGGCCATCCTCCCGGGCTGGTACGGCGT GGGCTCGGCGCTGGAGGCCTTCTCGAAGGAGGAGGGTGGGGCGGCGCAGCTCAAGCGCATGTACCAGGAGTGGCCCTTCT TCCGCGCCGTCATCGACAACGTCACCATGGTGCTGGCGAAGTCGGACATGGCCATCGCCGGGCGTTACGCGTCGCTGGCG CCTCCCGCCACCCGTTCGCTGTGGCGGCGCATCCAGCAGGAGCACCGGCGCACGCGCAGGCAGGTGAAGCGGCTGACGGG CGAGTCGAAGCTGCTCGACAACAACCCGCAGCTCCAGCGCAGCATCTCCCTGCGCAACCCCTATGTGGACCCCATGTCCT TCCTCCAGGTGGAGCTGCTCAAGCGCAAGCGCGAGGGCCAGGCGGAGGTGGATCGTCCACTGTTGCTCACGCTCAACGGC ATCGCCGCCGGCATGCGCAACACCGGGTAG
Upstream 100 bases:
>100_bases CCGGGAATGACAGACGCCTCGCCGTGATTCGCGGGCGCACGTCACTTTCTCGCGCGGAAATGCGGGCCAGTTCGCTGCTC AGCGGCTACCGTCGCACCAT
Downstream 100 bases:
>100_bases GCTCCGCGACGTCGGACATCCGAGGAGACGGTGATGGCCAGGGAGACGTTCAGCGTGGTGGAGGTCAACCCGGCGCACCG CTTCGCGCGGCTGCGGCCCG
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase [H]
Number of amino acids: Translated: 889; Mature: 888
Protein sequence:
>889_residues MARLRAVDQPLRRDVRLLGRLLGEVLVEQEGQALFDLEEEVRRLAIQRRRGPVAGRRAVAAELAEVLQRLPLERAEPVLR AFSVYFQLVNLAEQHHRIRRARTHAEVASAKPQRGSLEATLQVLKEAGIPAERVREAMRTMRVTLTLTAHPTQAVRRTLL EKLYRMAGLLEERDRCELTPRESSVNLALLREEITLLWQTDELRRERPTVGDEVKNVLWYVEEVLADELSLLPELLDWAF ERAYGEPLGPVDTPVRIHSWVGGDMDGNPLVTPDVFADTLRAHRARGLRRLLLDLERLGGRLSQSARHAKPSEELLSSVA KDAEELPDTERRYGPRTPGEPLRHKLRFMEERLHRALHYVTQQRAGTSVPMPQGAYRTPEALLADLDVLGRALEASKGTH AGLRDVRQVRERVLALGLSLAELEVRAPAEDAVSAAGSFNGGPAPTEGGARLLEVLARLKEAQSESGESACRTLILSMAS TAEDVLAAFRCLKHAGLWDEKRGCATANVVPLFEQLGALDSGPDVLRTLFADAEYRKHLDVRGGQEVMVGYSDSGKEVGL LAASAALYRAQVALTEVSREAGVPLRLFHGRGESVARGGGPAQEAILALPPGAVAGGYKATEQGEALDHKYARPELARRT VELILGGVLLHTLDAQPRPEPEAERTFRTVFDTLAETGRKAYRALVWEDPRFLEFFTAATPVEEIASLPIGSRPSKRRAG GLDTLRAIPWVFAWTQNRAILPGWYGVGSALEAFSKEEGGAAQLKRMYQEWPFFRAVIDNVTMVLAKSDMAIAGRYASLA PPATRSLWRRIQQEHRRTRRQVKRLTGESKLLDNNPQLQRSISLRNPYVDPMSFLQVELLKRKREGQAEVDRPLLLTLNG IAAGMRNTG
Sequences:
>Translated_889_residues MARLRAVDQPLRRDVRLLGRLLGEVLVEQEGQALFDLEEEVRRLAIQRRRGPVAGRRAVAAELAEVLQRLPLERAEPVLR AFSVYFQLVNLAEQHHRIRRARTHAEVASAKPQRGSLEATLQVLKEAGIPAERVREAMRTMRVTLTLTAHPTQAVRRTLL EKLYRMAGLLEERDRCELTPRESSVNLALLREEITLLWQTDELRRERPTVGDEVKNVLWYVEEVLADELSLLPELLDWAF ERAYGEPLGPVDTPVRIHSWVGGDMDGNPLVTPDVFADTLRAHRARGLRRLLLDLERLGGRLSQSARHAKPSEELLSSVA KDAEELPDTERRYGPRTPGEPLRHKLRFMEERLHRALHYVTQQRAGTSVPMPQGAYRTPEALLADLDVLGRALEASKGTH AGLRDVRQVRERVLALGLSLAELEVRAPAEDAVSAAGSFNGGPAPTEGGARLLEVLARLKEAQSESGESACRTLILSMAS TAEDVLAAFRCLKHAGLWDEKRGCATANVVPLFEQLGALDSGPDVLRTLFADAEYRKHLDVRGGQEVMVGYSDSGKEVGL LAASAALYRAQVALTEVSREAGVPLRLFHGRGESVARGGGPAQEAILALPPGAVAGGYKATEQGEALDHKYARPELARRT VELILGGVLLHTLDAQPRPEPEAERTFRTVFDTLAETGRKAYRALVWEDPRFLEFFTAATPVEEIASLPIGSRPSKRRAG GLDTLRAIPWVFAWTQNRAILPGWYGVGSALEAFSKEEGGAAQLKRMYQEWPFFRAVIDNVTMVLAKSDMAIAGRYASLA PPATRSLWRRIQQEHRRTRRQVKRLTGESKLLDNNPQLQRSISLRNPYVDPMSFLQVELLKRKREGQAEVDRPLLLTLNG IAAGMRNTG >Mature_888_residues ARLRAVDQPLRRDVRLLGRLLGEVLVEQEGQALFDLEEEVRRLAIQRRRGPVAGRRAVAAELAEVLQRLPLERAEPVLRA FSVYFQLVNLAEQHHRIRRARTHAEVASAKPQRGSLEATLQVLKEAGIPAERVREAMRTMRVTLTLTAHPTQAVRRTLLE KLYRMAGLLEERDRCELTPRESSVNLALLREEITLLWQTDELRRERPTVGDEVKNVLWYVEEVLADELSLLPELLDWAFE RAYGEPLGPVDTPVRIHSWVGGDMDGNPLVTPDVFADTLRAHRARGLRRLLLDLERLGGRLSQSARHAKPSEELLSSVAK DAEELPDTERRYGPRTPGEPLRHKLRFMEERLHRALHYVTQQRAGTSVPMPQGAYRTPEALLADLDVLGRALEASKGTHA GLRDVRQVRERVLALGLSLAELEVRAPAEDAVSAAGSFNGGPAPTEGGARLLEVLARLKEAQSESGESACRTLILSMAST AEDVLAAFRCLKHAGLWDEKRGCATANVVPLFEQLGALDSGPDVLRTLFADAEYRKHLDVRGGQEVMVGYSDSGKEVGLL AASAALYRAQVALTEVSREAGVPLRLFHGRGESVARGGGPAQEAILALPPGAVAGGYKATEQGEALDHKYARPELARRTV ELILGGVLLHTLDAQPRPEPEAERTFRTVFDTLAETGRKAYRALVWEDPRFLEFFTAATPVEEIASLPIGSRPSKRRAGG LDTLRAIPWVFAWTQNRAILPGWYGVGSALEAFSKEEGGAAQLKRMYQEWPFFRAVIDNVTMVLAKSDMAIAGRYASLAP PATRSLWRRIQQEHRRTRRQVKRLTGESKLLDNNPQLQRSISLRNPYVDPMSFLQVELLKRKREGQAEVDRPLLLTLNGI AAGMRNTG
Specific function: Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790393, Length=923, Percent_Identity=33.8028169014084, Blast_Score=433, Evalue=1e-122,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 [H]
Pfam domain/function: PF00311 PEPcase [H]
EC number: =4.1.1.31 [H]
Molecular weight: Translated: 98824; Mature: 98693
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS00781 PEPCASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLRAVDQPLRRDVRLLGRLLGEVLVEQEGQALFDLEEEVRRLAIQRRRGPVAGRRAVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH AELAEVLQRLPLERAEPVLRAFSVYFQLVNLAEQHHRIRRARTHAEVASAKPQRGSLEAT HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH LQVLKEAGIPAERVREAMRTMRVTLTLTAHPTQAVRRTLLEKLYRMAGLLEERDRCELTP HHHHHHCCCCHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RESSVNLALLREEITLLWQTDELRRERPTVGDEVKNVLWYVEEVLADELSLLPELLDWAF CCCCCHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERAYGEPLGPVDTPVRIHSWVGGDMDGNPLVTPDVFADTLRAHRARGLRRLLLDLERLGG HHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLSQSARHAKPSEELLSSVAKDAEELPDTERRYGPRTPGEPLRHKLRFMEERLHRALHYV HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH TQQRAGTSVPMPQGAYRTPEALLADLDVLGRALEASKGTHAGLRDVRQVRERVLALGLSL HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHH AELEVRAPAEDAVSAAGSFNGGPAPTEGGARLLEVLARLKEAQSESGESACRTLILSMAS HHHEECCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH TAEDVLAAFRCLKHAGLWDEKRGCATANVVPLFEQLGALDSGPDVLRTLFADAEYRKHLD HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC VRGGQEVMVGYSDSGKEVGLLAASAALYRAQVALTEVSREAGVPLRLFHGRGESVARGGG CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC PAQEAILALPPGAVAGGYKATEQGEALDHKYARPELARRTVELILGGVLLHTLDAQPRPE CHHHCEEECCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC PEAERTFRTVFDTLAETGRKAYRALVWEDPRFLEFFTAATPVEEIASLPIGSRPSKRRAG CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHCCCCCCCCCHHHCC GLDTLRAIPWVFAWTQNRAILPGWYGVGSALEAFSKEEGGAAQLKRMYQEWPFFRAVIDN CHHHHHHHHHHEEECCCCEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHH VTMVLAKSDMAIAGRYASLAPPATRSLWRRIQQEHRRTRRQVKRLTGESKLLDNNPQLQR HHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHH SISLRNPYVDPMSFLQVELLKRKREGQAEVDRPLLLTLNGIAAGMRNTG HHHHCCCCCCHHHHHHHHHHHHHHCCCHHCCCCEEEEEHHHHHCCCCCC >Mature Secondary Structure ARLRAVDQPLRRDVRLLGRLLGEVLVEQEGQALFDLEEEVRRLAIQRRRGPVAGRRAVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH AELAEVLQRLPLERAEPVLRAFSVYFQLVNLAEQHHRIRRARTHAEVASAKPQRGSLEAT HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH LQVLKEAGIPAERVREAMRTMRVTLTLTAHPTQAVRRTLLEKLYRMAGLLEERDRCELTP HHHHHHCCCCHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RESSVNLALLREEITLLWQTDELRRERPTVGDEVKNVLWYVEEVLADELSLLPELLDWAF CCCCCHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERAYGEPLGPVDTPVRIHSWVGGDMDGNPLVTPDVFADTLRAHRARGLRRLLLDLERLGG HHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLSQSARHAKPSEELLSSVAKDAEELPDTERRYGPRTPGEPLRHKLRFMEERLHRALHYV HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH TQQRAGTSVPMPQGAYRTPEALLADLDVLGRALEASKGTHAGLRDVRQVRERVLALGLSL HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHH AELEVRAPAEDAVSAAGSFNGGPAPTEGGARLLEVLARLKEAQSESGESACRTLILSMAS HHHEECCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH TAEDVLAAFRCLKHAGLWDEKRGCATANVVPLFEQLGALDSGPDVLRTLFADAEYRKHLD HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC VRGGQEVMVGYSDSGKEVGLLAASAALYRAQVALTEVSREAGVPLRLFHGRGESVARGGG CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC PAQEAILALPPGAVAGGYKATEQGEALDHKYARPELARRTVELILGGVLLHTLDAQPRPE CHHHCEEECCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC PEAERTFRTVFDTLAETGRKAYRALVWEDPRFLEFFTAATPVEEIASLPIGSRPSKRRAG CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHCCCCCCCCCHHHCC GLDTLRAIPWVFAWTQNRAILPGWYGVGSALEAFSKEEGGAAQLKRMYQEWPFFRAVIDN CHHHHHHHHHHEEECCCCEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHH VTMVLAKSDMAIAGRYASLAPPATRSLWRRIQQEHRRTRRQVKRLTGESKLLDNNPQLQR HHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHH SISLRNPYVDPMSFLQVELLKRKREGQAEVDRPLLLTLNGIAAGMRNTG HHHHCCCCCCHHHHHHHHHHHHHHCCCHHCCCCEEEEEHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8328954; 12000953 [H]