Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is yjgH [C]

Identifier: 108759353

GI number: 108759353

Start: 2003216

End: 2003650

Strand: Reverse

Name: yjgH [C]

Synonym: MXAN_1692

Alternate gene names: 108759353

Gene position: 2003650-2003216 (Counterclockwise)

Preceding gene: 108759952

Following gene: 108760084

Centisome position: 21.92

GC content: 66.44

Gene sequence:

>435_bases
ATGGGACAGACCGCAGACCCCTCGAAGACGTCGCCGCTGGTCCTGACGAATCCCAAGGGACTGTTCGACCCGGCGCCCTA
CGGCTTCTCGCACGTGGCGCAGGTGGCGCCGGGCACCCGGCTCATCTACCTGGCGGGGCAAGGTGGAGAGAATGAGACCG
GGGCCCTCCAGCCCGACTTCCGTCTCCAGGTGCGACAGGCGTTCCAGAACATCCGCACGGCCCTGGAATCCGTGGGAGCC
GGCGTCGGTGATGTCGCCAAGCTCACGATGCTCGTGGTGGACCACACGGAGGAGAAACTCCGGATCATCGGCCCCGAGTT
GGACGCGGCCTGGAACGGCGGCATGAAGCCGACCTGTACGCTGATTCCCGTCCCTCGGCTGGCGCTGGACGGGATGCTCT
TCGAAGTCGAAGCGGTCGCTGTCCTACGTGCCTGA

Upstream 100 bases:

>100_bases
CTGGCCACACATGCGCCATGCTCCAAGAGCGACGGTTGCTCGCTCGCATATCCGGGTCCGAACCTGGATACGCAGCCTCC
AGAATCCATACAGGTGAATC

Downstream 100 bases:

>100_bases
CAGCGCGTAGCCGCATGGGATGAACCCGCCCTCCGCATCGCGGTGGGTGATGGCATCTGCAGTCGGTCATGCCGGCCAGC
GTCCGCGCCCGCCGCCAGGA

Product: endoribonuclease L-PSP family protein

Products: NA

Alternate protein names: Translational Inhibitor Protein; Ribonuclease; Endoribonuclease Family Protein; YjgF Family Translation Initiation Inhibitor; Endoribonuclease L-PSP Family; Endoribonuclease L-PSP Family Protein; L-PSP Family Endoribonuclease; Endoribonuclease; Endoribonuclease L-PSP Superfamily; Exported Endoribonuclease Family Protein

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MGQTADPSKTSPLVLTNPKGLFDPAPYGFSHVAQVAPGTRLIYLAGQGGENETGALQPDFRLQVRQAFQNIRTALESVGA
GVGDVAKLTMLVVDHTEEKLRIIGPELDAAWNGGMKPTCTLIPVPRLALDGMLFEVEAVAVLRA

Sequences:

>Translated_144_residues
MGQTADPSKTSPLVLTNPKGLFDPAPYGFSHVAQVAPGTRLIYLAGQGGENETGALQPDFRLQVRQAFQNIRTALESVGA
GVGDVAKLTMLVVDHTEEKLRIIGPELDAAWNGGMKPTCTLIPVPRLALDGMLFEVEAVAVLRA
>Mature_143_residues
GQTADPSKTSPLVLTNPKGLFDPAPYGFSHVAQVAPGTRLIYLAGQGGENETGALQPDFRLQVRQAFQNIRTALESVGAG
VGDVAKLTMLVVDHTEEKLRIIGPELDAAWNGGMKPTCTLIPVPRLALDGMLFEVEAVAVLRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15294; Mature: 15163

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQTADPSKTSPLVLTNPKGLFDPAPYGFSHVAQVAPGTRLIYLAGQGGENETGALQPDF
CCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCH
RLQVRQAFQNIRTALESVGAGVGDVAKLTMLVVDHTEEKLRIIGPELDAAWNGGMKPTCT
HHHHHHHHHHHHHHHHHHCCCCCHHHHEEHHEEECCCCCEEEECCCCCCCCCCCCCCEEE
LIPVPRLALDGMLFEVEAVAVLRA
EEECCHHHHCCCHHHHEEEEEECC
>Mature Secondary Structure 
GQTADPSKTSPLVLTNPKGLFDPAPYGFSHVAQVAPGTRLIYLAGQGGENETGALQPDF
CCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCH
RLQVRQAFQNIRTALESVGAGVGDVAKLTMLVVDHTEEKLRIIGPELDAAWNGGMKPTCT
HHHHHHHHHHHHHHHHHHCCCCCHHHHEEHHEEECCCCCEEEECCCCCCCCCCCCCCEEE
LIPVPRLALDGMLFEVEAVAVLRA
EEECCHHHHCCCHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA