| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yjgH [C]
Identifier: 108759353
GI number: 108759353
Start: 2003216
End: 2003650
Strand: Reverse
Name: yjgH [C]
Synonym: MXAN_1692
Alternate gene names: 108759353
Gene position: 2003650-2003216 (Counterclockwise)
Preceding gene: 108759952
Following gene: 108760084
Centisome position: 21.92
GC content: 66.44
Gene sequence:
>435_bases ATGGGACAGACCGCAGACCCCTCGAAGACGTCGCCGCTGGTCCTGACGAATCCCAAGGGACTGTTCGACCCGGCGCCCTA CGGCTTCTCGCACGTGGCGCAGGTGGCGCCGGGCACCCGGCTCATCTACCTGGCGGGGCAAGGTGGAGAGAATGAGACCG GGGCCCTCCAGCCCGACTTCCGTCTCCAGGTGCGACAGGCGTTCCAGAACATCCGCACGGCCCTGGAATCCGTGGGAGCC GGCGTCGGTGATGTCGCCAAGCTCACGATGCTCGTGGTGGACCACACGGAGGAGAAACTCCGGATCATCGGCCCCGAGTT GGACGCGGCCTGGAACGGCGGCATGAAGCCGACCTGTACGCTGATTCCCGTCCCTCGGCTGGCGCTGGACGGGATGCTCT TCGAAGTCGAAGCGGTCGCTGTCCTACGTGCCTGA
Upstream 100 bases:
>100_bases CTGGCCACACATGCGCCATGCTCCAAGAGCGACGGTTGCTCGCTCGCATATCCGGGTCCGAACCTGGATACGCAGCCTCC AGAATCCATACAGGTGAATC
Downstream 100 bases:
>100_bases CAGCGCGTAGCCGCATGGGATGAACCCGCCCTCCGCATCGCGGTGGGTGATGGCATCTGCAGTCGGTCATGCCGGCCAGC GTCCGCGCCCGCCGCCAGGA
Product: endoribonuclease L-PSP family protein
Products: NA
Alternate protein names: Translational Inhibitor Protein; Ribonuclease; Endoribonuclease Family Protein; YjgF Family Translation Initiation Inhibitor; Endoribonuclease L-PSP Family; Endoribonuclease L-PSP Family Protein; L-PSP Family Endoribonuclease; Endoribonuclease; Endoribonuclease L-PSP Superfamily; Exported Endoribonuclease Family Protein
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MGQTADPSKTSPLVLTNPKGLFDPAPYGFSHVAQVAPGTRLIYLAGQGGENETGALQPDFRLQVRQAFQNIRTALESVGA GVGDVAKLTMLVVDHTEEKLRIIGPELDAAWNGGMKPTCTLIPVPRLALDGMLFEVEAVAVLRA
Sequences:
>Translated_144_residues MGQTADPSKTSPLVLTNPKGLFDPAPYGFSHVAQVAPGTRLIYLAGQGGENETGALQPDFRLQVRQAFQNIRTALESVGA GVGDVAKLTMLVVDHTEEKLRIIGPELDAAWNGGMKPTCTLIPVPRLALDGMLFEVEAVAVLRA >Mature_143_residues GQTADPSKTSPLVLTNPKGLFDPAPYGFSHVAQVAPGTRLIYLAGQGGENETGALQPDFRLQVRQAFQNIRTALESVGAG VGDVAKLTMLVVDHTEEKLRIIGPELDAAWNGGMKPTCTLIPVPRLALDGMLFEVEAVAVLRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15294; Mature: 15163
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQTADPSKTSPLVLTNPKGLFDPAPYGFSHVAQVAPGTRLIYLAGQGGENETGALQPDF CCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCH RLQVRQAFQNIRTALESVGAGVGDVAKLTMLVVDHTEEKLRIIGPELDAAWNGGMKPTCT HHHHHHHHHHHHHHHHHHCCCCCHHHHEEHHEEECCCCCEEEECCCCCCCCCCCCCCEEE LIPVPRLALDGMLFEVEAVAVLRA EEECCHHHHCCCHHHHEEEEEECC >Mature Secondary Structure GQTADPSKTSPLVLTNPKGLFDPAPYGFSHVAQVAPGTRLIYLAGQGGENETGALQPDF CCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCH RLQVRQAFQNIRTALESVGAGVGDVAKLTMLVVDHTEEKLRIIGPELDAAWNGGMKPTCT HHHHHHHHHHHHHHHHHHCCCCCHHHHEEHHEEECCCCCEEEECCCCCCCCCCCCCCEEE LIPVPRLALDGMLFEVEAVAVLRA EEECCHHHHCCCHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA