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The map label for this gene is araC [C]

Identifier: 108759334

GI number: 108759334

Start: 6573171

End: 6573983

Strand: Direct

Name: araC [C]

Synonym: MXAN_5274

Alternate gene names: 108759334

Gene position: 6573171-6573983 (Clockwise)

Preceding gene: 108760897

Following gene: 108762399

Centisome position: 71.92

GC content: 67.65

Gene sequence:

>813_bases
ATGATGCACACGATCTATCGGCCCCACGCACCTCTCGACAAGTTCGTGGACTTCTTCTGGGTGTCCGCCGGCTACGTCGC
ACGGGCGCCACGAGAACGTGTGCTGCCGTCGGGCTCGCAGTCCCTTATCGTCCCTCTCGGCGCCCTCCCACTGCGCGTCT
ACTCCAGTGACCAGACAGACGAGGCCGCTGAAATCCGGGGCGCGATCGTCACCGGCGCGAGAAGCAGCCCGCTGACCATC
GCGGCCGTGGCTGGCCCGACCGCCGGTATCCACTTCAAGCCCGGCGGCGCGCGCGTCTTCTTCGACGTGCCCTGCAACGA
ATTCGCGGAACAAGCCATTTCGCTGGATGCGATATGGGGCGCGTCGGCGCACTCACTGCGCGAACGGATAATGGAGGCAT
CCTCGCCGCGCGAGCGATTCCTGCTGCTGGAAGAACACCTCCTGCACCGACTGCGCCGGCCCGTCGAACCAGCGCCCGCG
CTTCGTGCGGCGCTGGCCGCGTTCGAGGAACCCGACCTCACGTCGGTCGCTGAAGTCAATCGCCGCACGGGGCTCTCTCC
CAAGCGCCTGTTGGCCCTGTTCCGCGAGGAAGTCGGCTTGAGTCCGAAGACGTACTGGCGCGTTCGACGGTTTCGAGCGG
CGCTCCTCGACGTCGAACAGGGCGCCTTGCGTGGCGCCGCGGTGGCCGCCGAGCACGGGTACTTCGACCAGGCCCACTTC
CTTCGCGAGTTCCGGTCGCTCGCCGGCTCAAGCCCCCGCGAGTACCTGGCAACGCGGGTCGAGGGCACCGACCACGTGGC
GGTCTCCGGGTAA

Upstream 100 bases:

>100_bases
ATCGGCACGGGGCCGTAGTCAGAAATCTCTGTCATGGTCACTGGACTTGGGCCTTGAGAATCATGCGAACAACTCGCATG
ATTCGCTCACAGCACGCGCC

Downstream 100 bases:

>100_bases
AAAGATCCAATCCGCGGCAGCTGTCCCGGCGTTTCCTAGGCGTCATGGAACCGAGTGAACGCCTCCCACAGCGCGTGCCG
GCAGGCCCGGCATGGACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Helix-Turn-Helix AraC Domain Protein; ArsR Family Transcriptional Regulator

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MMHTIYRPHAPLDKFVDFFWVSAGYVARAPRERVLPSGSQSLIVPLGALPLRVYSSDQTDEAAEIRGAIVTGARSSPLTI
AAVAGPTAGIHFKPGGARVFFDVPCNEFAEQAISLDAIWGASAHSLRERIMEASSPRERFLLLEEHLLHRLRRPVEPAPA
LRAALAAFEEPDLTSVAEVNRRTGLSPKRLLALFREEVGLSPKTYWRVRRFRAALLDVEQGALRGAAVAAEHGYFDQAHF
LREFRSLAGSSPREYLATRVEGTDHVAVSG

Sequences:

>Translated_270_residues
MMHTIYRPHAPLDKFVDFFWVSAGYVARAPRERVLPSGSQSLIVPLGALPLRVYSSDQTDEAAEIRGAIVTGARSSPLTI
AAVAGPTAGIHFKPGGARVFFDVPCNEFAEQAISLDAIWGASAHSLRERIMEASSPRERFLLLEEHLLHRLRRPVEPAPA
LRAALAAFEEPDLTSVAEVNRRTGLSPKRLLALFREEVGLSPKTYWRVRRFRAALLDVEQGALRGAAVAAEHGYFDQAHF
LREFRSLAGSSPREYLATRVEGTDHVAVSG
>Mature_270_residues
MMHTIYRPHAPLDKFVDFFWVSAGYVARAPRERVLPSGSQSLIVPLGALPLRVYSSDQTDEAAEIRGAIVTGARSSPLTI
AAVAGPTAGIHFKPGGARVFFDVPCNEFAEQAISLDAIWGASAHSLRERIMEASSPRERFLLLEEHLLHRLRRPVEPAPA
LRAALAAFEEPDLTSVAEVNRRTGLSPKRLLALFREEVGLSPKTYWRVRRFRAALLDVEQGALRGAAVAAEHGYFDQAHF
LREFRSLAGSSPREYLATRVEGTDHVAVSG

Specific function: This Protein Controls The Expression Of At Least Six Genes That Are Involved In The Transport And Catabolism Of L-Arabinose. It Regulates Initiation Of Transcription Of The Arabad Operon And It Also Controls Its Own Synthesis. The L- Arabinose Operon Dis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29703; Mature: 29703

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMHTIYRPHAPLDKFVDFFWVSAGYVARAPRERVLPSGSQSLIVPLGALPLRVYSSDQTD
CCCCCCCCCCCHHHHHHHHHHHCCHHHCCCHHHCCCCCCCEEEEECCCCEEEEECCCCCC
EAAEIRGAIVTGARSSPLTIAAVAGPTAGIHFKPGGARVFFDVPCNEFAEQAISLDAIWG
HHHHHHHHEEECCCCCCEEEEEECCCCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHCC
ASAHSLRERIMEASSPRERFLLLEEHLLHRLRRPVEPAPALRAALAAFEEPDLTSVAEVN
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHH
RRTGLSPKRLLALFREEVGLSPKTYWRVRRFRAALLDVEQGALRGAAVAAEHGYFDQAHF
HHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LREFRSLAGSSPREYLATRVEGTDHVAVSG
HHHHHHHHCCCHHHHHHHHCCCCCEEEECC
>Mature Secondary Structure
MMHTIYRPHAPLDKFVDFFWVSAGYVARAPRERVLPSGSQSLIVPLGALPLRVYSSDQTD
CCCCCCCCCCCHHHHHHHHHHHCCHHHCCCHHHCCCCCCCEEEEECCCCEEEEECCCCCC
EAAEIRGAIVTGARSSPLTIAAVAGPTAGIHFKPGGARVFFDVPCNEFAEQAISLDAIWG
HHHHHHHHEEECCCCCCEEEEEECCCCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHCC
ASAHSLRERIMEASSPRERFLLLEEHLLHRLRRPVEPAPALRAALAAFEEPDLTSVAEVN
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHH
RRTGLSPKRLLALFREEVGLSPKTYWRVRRFRAALLDVEQGALRGAAVAAEHGYFDQAHF
HHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LREFRSLAGSSPREYLATRVEGTDHVAVSG
HHHHHHHHCCCHHHHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA