| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is rhtA [H]
Identifier: 108759302
GI number: 108759302
Start: 190980
End: 191867
Strand: Direct
Name: rhtA [H]
Synonym: MXAN_0155
Alternate gene names: 108759302
Gene position: 190980-191867 (Clockwise)
Preceding gene: 108761840
Following gene: 108763287
Centisome position: 2.09
GC content: 70.27
Gene sequence:
>888_bases ATGTCTCGAGTCTTGACGAAGCCGGGGCCGGTCACGGTGGCGGTCCTGACGTTGCTCGTCGCGATGGCCTCCATCCAGAC GGGCGCTTCGCTGGCCAAGCAAGTCTTCCCCGTCTTGGGCGCGGCGGGGGCCACGGCGCTTCGCGTGTTCTTCGCGGCGC TCATCCTGGCGGCGGTGTTCCGGCCCTGGCGGCAGCGGCTCACCCGCAAGGACTTGCGGGCCGTGGCCATCTACGGCGCG GCGCTGGGCGGGATGAACCTGACCTTCTACCTGGCGCTGGAGCGCATCCCGCTGGGCATCGCCGTCGCCATCGAGTTCAC CGGGCCGCTCGCCCTGGCCATCTTCTCCACGCGCCGGGCGCTCGACTTCGTGTGGGCGCTGCTGGCCGTGGCAGGCATCC TGCTGATTCTGCCGCTGTCGGAGACGTCGCGGTCGCTGGACTGGATGGGCGTCTTCTGGGCACTGGTGGCCGCCACCTGC TGGGCGCTGTACATCCTCTTCGGTCAGCGGGCCGGAGGCACCGTCCACGGCGGCACGGCGGCGTCGCTGGGGATGTGCGT CGCGGCGCTGCTCGTCATGCCCTTCGGGGTCGCGCACGCCGGCATGAAGCTGCTGGACGTGTCGCTGCTTCCCATCATCC TGTGCGTGGCCGTGCTGTCGAGCGCGCTGCCGTACTCGTTGGAGATGTATGCCCTCAAGGCGCTCCCCACGCGCACGTTC GGCATCCTGATGAGCCTGGAGCCGGCGCTGGCCGCCGTGTCCGGGCTGCTGCTGCTGGATGAGCGGCTGTCGCTGGTGCA GTGGGCGGCCATCGGCTGCATCATCCTGGCGTCCGTGGGCAGCTCCGCGACGTCGCGCAAGCCCGTTGAAGCCGTCGCCG CGAGCTGA
Upstream 100 bases:
>100_bases CTCCCGGCCAGGCGAGTGTTGTCCAGCGTGTTCTCTTCACCCTTCAGGGCAGGCGGGTGATACGGGATGGACAGAGGGCG CGGTGGAAGAGGTGCGCGGA
Downstream 100 bases:
>100_bases CCAGAAGGGGCCGCCGACACCGTTCCCTGGGGTCGGGCCTGTCTTCGGGCTCGCAATGGGGCCCGGCGCCGGGCTAGAGG ACGGCCTCATGCGTGACCGA
Product: EamA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSRVLTKPGPVTVAVLTLLVAMASIQTGASLAKQVFPVLGAAGATALRVFFAALILAAVFRPWRQRLTRKDLRAVAIYGA ALGGMNLTFYLALERIPLGIAVAIEFTGPLALAIFSTRRALDFVWALLAVAGILLILPLSETSRSLDWMGVFWALVAATC WALYILFGQRAGGTVHGGTAASLGMCVAALLVMPFGVAHAGMKLLDVSLLPIILCVAVLSSALPYSLEMYALKALPTRTF GILMSLEPALAAVSGLLLLDERLSLVQWAAIGCIILASVGSSATSRKPVEAVAAS
Sequences:
>Translated_295_residues MSRVLTKPGPVTVAVLTLLVAMASIQTGASLAKQVFPVLGAAGATALRVFFAALILAAVFRPWRQRLTRKDLRAVAIYGA ALGGMNLTFYLALERIPLGIAVAIEFTGPLALAIFSTRRALDFVWALLAVAGILLILPLSETSRSLDWMGVFWALVAATC WALYILFGQRAGGTVHGGTAASLGMCVAALLVMPFGVAHAGMKLLDVSLLPIILCVAVLSSALPYSLEMYALKALPTRTF GILMSLEPALAAVSGLLLLDERLSLVQWAAIGCIILASVGSSATSRKPVEAVAAS >Mature_294_residues SRVLTKPGPVTVAVLTLLVAMASIQTGASLAKQVFPVLGAAGATALRVFFAALILAAVFRPWRQRLTRKDLRAVAIYGAA LGGMNLTFYLALERIPLGIAVAIEFTGPLALAIFSTRRALDFVWALLAVAGILLILPLSETSRSLDWMGVFWALVAATCW ALYILFGQRAGGTVHGGTAASLGMCVAALLVMPFGVAHAGMKLLDVSLLPIILCVAVLSSALPYSLEMYALKALPTRTFG ILMSLEPALAAVSGLLLLDERLSLVQWAAIGCIILASVGSSATSRKPVEAVAAS
Specific function: Unknown
COG id: COG5006
COG function: function code R; Predicted permease, DMT superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI1787033, Length=278, Percent_Identity=55.0359712230216, Blast_Score=282, Evalue=2e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 30862; Mature: 30730
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVLTKPGPVTVAVLTLLVAMASIQTGASLAKQVFPVLGAAGATALRVFFAALILAAVF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RPWRQRLTRKDLRAVAIYGAALGGMNLTFYLALERIPLGIAVAIEFTGPLALAIFSTRRA HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCEEEEEEEECCHHHHHHHHHHHH LDFVWALLAVAGILLILPLSETSRSLDWMGVFWALVAATCWALYILFGQRAGGTVHGGTA HHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH ASLGMCVAALLVMPFGVAHAGMKLLDVSLLPIILCVAVLSSALPYSLEMYALKALPTRTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHH GILMSLEPALAAVSGLLLLDERLSLVQWAAIGCIILASVGSSATSRKPVEAVAAS HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCC >Mature Secondary Structure SRVLTKPGPVTVAVLTLLVAMASIQTGASLAKQVFPVLGAAGATALRVFFAALILAAVF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RPWRQRLTRKDLRAVAIYGAALGGMNLTFYLALERIPLGIAVAIEFTGPLALAIFSTRRA HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCEEEEEEEECCHHHHHHHHHHHH LDFVWALLAVAGILLILPLSETSRSLDWMGVFWALVAATCWALYILFGQRAGGTVHGGTA HHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH ASLGMCVAALLVMPFGVAHAGMKLLDVSLLPIILCVAVLSSALPYSLEMYALKALPTRTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHH GILMSLEPALAAVSGLLLLDERLSLVQWAAIGCIILASVGSSATSRKPVEAVAAS HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]