| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is kinE [H]
Identifier: 108759200
GI number: 108759200
Start: 6294467
End: 6296014
Strand: Direct
Name: kinE [H]
Synonym: MXAN_5034
Alternate gene names: 108759200
Gene position: 6294467-6296014 (Clockwise)
Preceding gene: 108761223
Following gene: 108761135
Centisome position: 68.87
GC content: 70.03
Gene sequence:
>1548_bases ATGCCCGTGAAGCTCTCTCTCGCGACACGCATCTTCCTGGGCTACGCCGTGGTGCTCGGCACCTTCGGGCTGGTGTCCCT GTTCAGCGTGACGGAGCTCCACCGCAACCGGCTGGAAATCCGGCTGGTGAGCCAGGGCTACCTCCAGCTCTCCCAGGACG CCGCGGAGCTGGAGACCTTCCACGCCACCCAGGAGAAGGACACCGAGCGCCTGATTCAAGAAGGCAACGTCGAAATCCGC CGCGCCTTCATCCGGCTGGCCCGGACCTACAACTCGCCCCTCATGACCCAGCGGCTCGCCGCCGCCCAGGCCAAGGCGCA TGAGGTGCTGGCCTCCGCCCCCGACAGCGAGGGGCCCTTCATCCGGGGCCTGGAGGACCGCTTCGGCGAGCTCCAGGCCC GCTACCGCGACTACGGCCGCGCCGCGGAGGCCGTCTTCGCCGTCCTGTCCACCGAGAATCCGAACCGGGAACAGGTCGCC GTCGCCACCGCCGAGCTGCGGCAGGAGGAGAACGCCATCGGCCGAGAGATTCGCGTGCTGCGCGCCGCCCTGTCCAACCG CATCCGCGAGCGCGTGGACGGCGCCGAGGAGCGCGAGCGCACCACCGGCCTCTTCATCATCGGCTTCTCCGTGGCCGCCA TCGCCGTGGGCGTGGGCGCCACTGCATGGTCCGCCCGCACGCTGCGCCCCATGCGCAACCTCATCCGGGGCGTGTCCCGC ATCGGCCGTGGTGACTACAACGCCCAGCTCGGCGTGCGCGGCGACGACGAGGTGGCCGTCCTGGCCCGGGAGTTCGACCA GATGGCCCGCTCGCTCCAGGCGCGTGAGGCCCAGCTCAAGGCCCAGGCCGAGGCCCTCATGCGCGCGGAGCAACTGGCCG CCGTGGGCCGCATCTCCGCGCAAATCGTCCACGAGGTGCGCAACCCCCTGTCCTCCATTGGCCTCAACGTGGAGTTGCTC CAGGACGGGTTCGAAACCGCCCGCTTCGCGACCCCCGAGGACGCGGCCGAGGTGAAGGACCTCATCTCCGCCGTCACCCA GGAGGTGGACCGCCTGGCGGATGTCACCGAGCAGTACCTGCGCATGGCCCGCCCGCCCCGGCCCGACCTGGACCCGCGCG ACGTCACCGCCGTGCTGGACACCGTGCTCGACTTCACCCGAGAGGAGTTGGAGCGCGCCGGCGTGGAAGTGGTGCGCGAC TTCGCCCTGGATACCCCGCATGTGCTCGCCGACGAGGGCCAGTTGCGGCAGGTCTTCCTCAACCTGCTGCGCAACAGCCG CGAGGCCATGCCGTCCGGCGGCCGCCTCACCATCGTCACCCGTCCGGCGGAGGACGCCGTGGAAGTCACGGTGCGCGATA CCGGACAGGGCATGACGGAGGATATCCGACAGCGCCTCTTCGAGCCCTTCTTCACCACCAAGGAGGGGGGCACGGGCCTG GGCCTGGCCGTCAGCCAGCAAATCCTCCAGGTGCACGGTGGCTCGCTCTCCTGCCAGAGTATTCCCGGCCAGGGGACGGC CTTCGTGTTAAGGCTTCCTCGCGCATGA
Upstream 100 bases:
>100_bases CCCACTGGAGGTAGCCCCTCCCCCTCGGCGGCCCCCGAGCAGGCGCCTGCGCCCCCTGGAGACGAGACTTGCGGTTGGAC GGCCCGCCACGTAGCGAGGA
Downstream 100 bases:
>100_bases GCTTCACTACGTACCGGGACGTGCTGCCCTCCGGGCTGCGCGTCGTCACTATCGAGACGCCCCACCTCCACACCGCCCTG CTCGCCGTCTACGTGCGGAC
Product: sensor histidine kinase
Products: NA
Alternate protein names: Sensor histidine kinase E [H]
Number of amino acids: Translated: 515; Mature: 514
Protein sequence:
>515_residues MPVKLSLATRIFLGYAVVLGTFGLVSLFSVTELHRNRLEIRLVSQGYLQLSQDAAELETFHATQEKDTERLIQEGNVEIR RAFIRLARTYNSPLMTQRLAAAQAKAHEVLASAPDSEGPFIRGLEDRFGELQARYRDYGRAAEAVFAVLSTENPNREQVA VATAELRQEENAIGREIRVLRAALSNRIRERVDGAEERERTTGLFIIGFSVAAIAVGVGATAWSARTLRPMRNLIRGVSR IGRGDYNAQLGVRGDDEVAVLAREFDQMARSLQAREAQLKAQAEALMRAEQLAAVGRISAQIVHEVRNPLSSIGLNVELL QDGFETARFATPEDAAEVKDLISAVTQEVDRLADVTEQYLRMARPPRPDLDPRDVTAVLDTVLDFTREELERAGVEVVRD FALDTPHVLADEGQLRQVFLNLLRNSREAMPSGGRLTIVTRPAEDAVEVTVRDTGQGMTEDIRQRLFEPFFTTKEGGTGL GLAVSQQILQVHGGSLSCQSIPGQGTAFVLRLPRA
Sequences:
>Translated_515_residues MPVKLSLATRIFLGYAVVLGTFGLVSLFSVTELHRNRLEIRLVSQGYLQLSQDAAELETFHATQEKDTERLIQEGNVEIR RAFIRLARTYNSPLMTQRLAAAQAKAHEVLASAPDSEGPFIRGLEDRFGELQARYRDYGRAAEAVFAVLSTENPNREQVA VATAELRQEENAIGREIRVLRAALSNRIRERVDGAEERERTTGLFIIGFSVAAIAVGVGATAWSARTLRPMRNLIRGVSR IGRGDYNAQLGVRGDDEVAVLAREFDQMARSLQAREAQLKAQAEALMRAEQLAAVGRISAQIVHEVRNPLSSIGLNVELL QDGFETARFATPEDAAEVKDLISAVTQEVDRLADVTEQYLRMARPPRPDLDPRDVTAVLDTVLDFTREELERAGVEVVRD FALDTPHVLADEGQLRQVFLNLLRNSREAMPSGGRLTIVTRPAEDAVEVTVRDTGQGMTEDIRQRLFEPFFTTKEGGTGL GLAVSQQILQVHGGSLSCQSIPGQGTAFVLRLPRA >Mature_514_residues PVKLSLATRIFLGYAVVLGTFGLVSLFSVTELHRNRLEIRLVSQGYLQLSQDAAELETFHATQEKDTERLIQEGNVEIRR AFIRLARTYNSPLMTQRLAAAQAKAHEVLASAPDSEGPFIRGLEDRFGELQARYRDYGRAAEAVFAVLSTENPNREQVAV ATAELRQEENAIGREIRVLRAALSNRIRERVDGAEERERTTGLFIIGFSVAAIAVGVGATAWSARTLRPMRNLIRGVSRI GRGDYNAQLGVRGDDEVAVLAREFDQMARSLQAREAQLKAQAEALMRAEQLAAVGRISAQIVHEVRNPLSSIGLNVELLQ DGFETARFATPEDAAEVKDLISAVTQEVDRLADVTEQYLRMARPPRPDLDPRDVTAVLDTVLDFTREELERAGVEVVRDF ALDTPHVLADEGQLRQVFLNLLRNSREAMPSGGRLTIVTRPAEDAVEVTVRDTGQGMTEDIRQRLFEPFFTTKEGGTGLG LAVSQQILQVHGGSLSCQSIPGQGTAFVLRLPRA
Specific function: Phosphorylates the sporulation-regulatory protein spo0A under biofilm growth conditions. Also able to weakly phosphorylate spo0F [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 PAS (PER-ARNT-SIM) domains [H]
Homologues:
Organism=Escherichia coli, GI1788549, Length=229, Percent_Identity=32.7510917030568, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1790436, Length=229, Percent_Identity=32.7510917030568, Blast_Score=125, Evalue=6e-30, Organism=Escherichia coli, GI1788393, Length=296, Percent_Identity=29.3918918918919, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1790300, Length=250, Percent_Identity=28, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1789149, Length=351, Percent_Identity=25.0712250712251, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI145693157, Length=249, Percent_Identity=28.9156626506024, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI87081816, Length=344, Percent_Identity=27.6162790697674, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI1786783, Length=289, Percent_Identity=25.2595155709343, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1790346, Length=295, Percent_Identity=25.0847457627119, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI48994928, Length=228, Percent_Identity=28.5087719298246, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1786600, Length=256, Percent_Identity=25, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 56860; Mature: 56729
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS50885 HAMP ; PS00050 RIBOSOMAL_L23 ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVKLSLATRIFLGYAVVLGTFGLVSLFSVTELHRNRLEIRLVSQGYLQLSQDAAELETF CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHH HATQEKDTERLIQEGNVEIRRAFIRLARTYNSPLMTQRLAAAQAKAHEVLASAPDSEGPF HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC IRGLEDRFGELQARYRDYGRAAEAVFAVLSTENPNREQVAVATAELRQEENAIGREIRVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RAALSNRIRERVDGAEERERTTGLFIIGFSVAAIAVGVGATAWSARTLRPMRNLIRGVSR HHHHHHHHHHHHCCHHHHHHHCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH IGRGDYNAQLGVRGDDEVAVLAREFDQMARSLQAREAQLKAQAEALMRAEQLAAVGRISA HCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIVHEVRNPLSSIGLNVELLQDGFETARFATPEDAAEVKDLISAVTQEVDRLADVTEQYL HHHHHHHHHHHHHCCCHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RMARPPRPDLDPRDVTAVLDTVLDFTREELERAGVEVVRDFALDTPHVLADEGQLRQVFL HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH NLLRNSREAMPSGGRLTIVTRPAEDAVEVTVRDTGQGMTEDIRQRLFEPFFTTKEGGTGL HHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCC GLAVSQQILQVHGGSLSCQSIPGQGTAFVLRLPRA HHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCC >Mature Secondary Structure PVKLSLATRIFLGYAVVLGTFGLVSLFSVTELHRNRLEIRLVSQGYLQLSQDAAELETF CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHH HATQEKDTERLIQEGNVEIRRAFIRLARTYNSPLMTQRLAAAQAKAHEVLASAPDSEGPF HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC IRGLEDRFGELQARYRDYGRAAEAVFAVLSTENPNREQVAVATAELRQEENAIGREIRVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RAALSNRIRERVDGAEERERTTGLFIIGFSVAAIAVGVGATAWSARTLRPMRNLIRGVSR HHHHHHHHHHHHCCHHHHHHHCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH IGRGDYNAQLGVRGDDEVAVLAREFDQMARSLQAREAQLKAQAEALMRAEQLAAVGRISA HCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIVHEVRNPLSSIGLNVELLQDGFETARFATPEDAAEVKDLISAVTQEVDRLADVTEQYL HHHHHHHHHHHHHCCCHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RMARPPRPDLDPRDVTAVLDTVLDFTREELERAGVEVVRDFALDTPHVLADEGQLRQVFL HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH NLLRNSREAMPSGGRLTIVTRPAEDAVEVTVRDTGQGMTEDIRQRLFEPFFTTKEGGTGL HHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCC GLAVSQQILQVHGGSLSCQSIPGQGTAFVLRLPRA HHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]