| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yaiI [C]
Identifier: 108759181
GI number: 108759181
Start: 6876366
End: 6876827
Strand: Direct
Name: yaiI [C]
Synonym: MXAN_5526
Alternate gene names: 108759181
Gene position: 6876366-6876827 (Clockwise)
Preceding gene: 108762888
Following gene: 108761882
Centisome position: 75.24
GC content: 68.61
Gene sequence:
>462_bases ATGAAAATCTGGGTCGATGCCGATGCCTGCCCGGGCCCCGTCCGGGACATCATCCTGCGTGCTGGCCAGCGCGTGAAGGT CCACACTGTCTTCGTGGCCAACCACGCGCTCTCCCTGCCCCGGTTGGCCTATGTCTCCAGCGTGCAGGTGGGCGCGGGCC TCGACGTCGCCGACCGGCACATCGCCCAGCAGGCACAGCCGGGAGACCTGGCCGTCACCCAGGACATTCCGCTCGCCGCG CTGCTGGTGCCCAAGGGCGTCGTGGTGCTGGACCCGCGCGGAGAGGTCTTCACCGAGGAGAACGTCGCCGAGCGGCTCTC CGTCCGGAACTTCATGCAGGAGCTTCGGGAGAGCGGCGTGACGACCGGAGGCCCGGACGGATACTCGGCTCAGGACCGGC AGCAGTTCGCAGGCGCCCTGGACCGGGAGCTGACCCGGCTGGTGAAAACGGAGCCCAAGTAA
Upstream 100 bases:
>100_bases CGCCCGCATGGAGTCCGCGCTGAGCCTTGGGCCAAAAGACACGGCCGCTCGGCGCGCCGTGGATGAGTCCGCGCGCGGAT CCTGAGATAGTCGTCCCCGT
Downstream 100 bases:
>100_bases AATTCGTCCAATCCTCCCGAGCGCGCCGGAGGCATCCTCCTGGCATCCACCCCCACCCAGGAAGGTGCTCCATGAACAAC AAGAACCCGTCCTCCTCCGC
Product: YaiI/YqxD family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MKIWVDADACPGPVRDIILRAGQRVKVHTVFVANHALSLPRLAYVSSVQVGAGLDVADRHIAQQAQPGDLAVTQDIPLAA LLVPKGVVVLDPRGEVFTEENVAERLSVRNFMQELRESGVTTGGPDGYSAQDRQQFAGALDRELTRLVKTEPK
Sequences:
>Translated_153_residues MKIWVDADACPGPVRDIILRAGQRVKVHTVFVANHALSLPRLAYVSSVQVGAGLDVADRHIAQQAQPGDLAVTQDIPLAA LLVPKGVVVLDPRGEVFTEENVAERLSVRNFMQELRESGVTTGGPDGYSAQDRQQFAGALDRELTRLVKTEPK >Mature_153_residues MKIWVDADACPGPVRDIILRAGQRVKVHTVFVANHALSLPRLAYVSSVQVGAGLDVADRHIAQQAQPGDLAVTQDIPLAA LLVPKGVVVLDPRGEVFTEENVAERLSVRNFMQELRESGVTTGGPDGYSAQDRQQFAGALDRELTRLVKTEPK
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family
Homologues:
Organism=Escherichia coli, GI87081732, Length=142, Percent_Identity=48.5915492957746, Blast_Score=152, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y5526_MYXXD (Q1D104)
Other databases:
- EMBL: CP000113 - RefSeq: YP_633669.1 - STRING: Q1D104 - GeneID: 4104452 - GenomeReviews: CP000113_GR - KEGG: mxa:MXAN_5526 - TIGR: MXAN_5526 - eggNOG: COG1671 - HOGENOM: HBG363074 - OMA: PLASRCV - PhylomeDB: Q1D104 - ProtClustDB: CLSK776088 - BioCyc: MXAN246197:MXAN_5526-MONOMER - HAMAP: MF_00489 - InterPro: IPR003791
Pfam domain/function: PF02639 DUF188
EC number: NA
Molecular weight: Translated: 16577; Mature: 16577
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIWVDADACPGPVRDIILRAGQRVKVHTVFVANHALSLPRLAYVSSVQVGAGLDVADRH CEEEECCCCCCCHHHHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHCCCCCCCCCHHHHH IAQQAQPGDLAVTQDIPLAALLVPKGVVVLDPRGEVFTEENVAERLSVRNFMQELRESGV HHHCCCCCCEEEECCCCEEEEECCCCEEEECCCCCEECHHHHHHHHHHHHHHHHHHHCCC TTGGPDGYSAQDRQQFAGALDRELTRLVKTEPK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKIWVDADACPGPVRDIILRAGQRVKVHTVFVANHALSLPRLAYVSSVQVGAGLDVADRH CEEEECCCCCCCHHHHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHCCCCCCCCCHHHHH IAQQAQPGDLAVTQDIPLAALLVPKGVVVLDPRGEVFTEENVAERLSVRNFMQELRESGV HHHCCCCCCEEEECCCCEEEEECCCCEEEECCCCCEECHHHHHHHHHHHHHHHHHHHCCC TTGGPDGYSAQDRQQFAGALDRELTRLVKTEPK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA