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The map label for this gene is glxA [H]

Identifier: 108759126

GI number: 108759126

Start: 3987067

End: 3988101

Strand: Reverse

Name: glxA [H]

Synonym: MXAN_3429

Alternate gene names: 108759126

Gene position: 3988101-3987067 (Counterclockwise)

Preceding gene: 108760180

Following gene: 108757552

Centisome position: 43.63

GC content: 66.67

Gene sequence:

>1035_bases
ATGGCGAAACGGACAACCAGGAGCGCTCGCGTCGGAATCTGCCTCTATCCCGGCGTCTGGGGTTCGAGCGCAAGCCTCGC
GAAGGACCTGATCCACATCGCGTCGGTGATCGCTCAGGCACGACCGGGCAGCGGCAATATCGAGGCCCGATTCCTTGGTG
CAAAGCCGGCCGAGGTGACGACTGCTGGCGGACCATTGCTCCGCGCGGAGGACGCGTGGGATCGCGTAGACGTCGACGTG
CTCGTTCTCCCGTCGCTGGCGATTCCGTTCATGGAGCCCGCGCGGCAGCCACCGGGGCTCTCGGACTGGATTGCCGGGCA
ACACCGGCGAGGGTGCCTGGTGCTCGCGCTCACCACAGGGAGCTGGTTGCTCGCGGAGACAGGTTTGCTCGATGGCCACA
CGGCGACCACGCACTGGGCCTGCCTGGAGCGCTGTCGCCGCCAGTATCCACGGGTGAACTGGACGAGCGAACAACGGCTC
GCGGTAACGGGAAGACTCGTGACCGCGCGGGACATGAGCGCGTCAGCGACGGCGCTCTGTCACGCAATCGGTCGCGTCCT
GAGCGCGCCGATCGCCGAGCGCACCTATCAGTACTCGCTCATCTACGAGCCCGGCGCGGATGCGCTGCCCCTGCTGCACA
CCATTCCCCTTCGCGACCACGGAGACGCCCAGGTCCTCATGGTGCAGGAGTGGATCGAAACGCACTACGGCGAGCCTGTC
GCTGCAGAGGGAGTTGCGCGGATGGTGCACATGAGCCCGCGCAATCTCCGGCGCCGCTTCCTCGACGCCACGGGGAAGAC
CCTTGTCGACTACCTCACGGAGGTTCGGCTGGCGCGCGCCCGAGCGCTTCTACTCTCCAGCAACGAGGCCGTCTCGCAGA
TCGCATACCGCGTTGGGTACGAGGACGCCTCCACGTTCACCGCGCTCTTCAAGAAGCGGCACGGGCTGACACCGAGCGCA
TATCGGAAGACGTCGGCGGGGCCCGCTGGCTTGAGCCCCGCATACGACGGCGAGCGTCGTACTGCGATTACGTAG

Upstream 100 bases:

>100_bases
GCGTCCTTCTCGAAATACTCTCGTCCAGCGGTGGTTTCAGCCATGGTCAGAGCATGGCTTGGAGGGGTCGAGCCCTCCAG
AGGCGCGACGGACATAGACT

Downstream 100 bases:

>100_bases
CGAGCCACATGACCGCGCGACGACAGTTGCTGTCACGTAGCGATGTCCGCGATTTCGCGTCCTGCCTCCAGGGTGAGAAG
CCCTCCCTCACTGCCGGGCC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MAKRTTRSARVGICLYPGVWGSSASLAKDLIHIASVIAQARPGSGNIEARFLGAKPAEVTTAGGPLLRAEDAWDRVDVDV
LVLPSLAIPFMEPARQPPGLSDWIAGQHRRGCLVLALTTGSWLLAETGLLDGHTATTHWACLERCRRQYPRVNWTSEQRL
AVTGRLVTARDMSASATALCHAIGRVLSAPIAERTYQYSLIYEPGADALPLLHTIPLRDHGDAQVLMVQEWIETHYGEPV
AAEGVARMVHMSPRNLRRRFLDATGKTLVDYLTEVRLARARALLLSSNEAVSQIAYRVGYEDASTFTALFKKRHGLTPSA
YRKTSAGPAGLSPAYDGERRTAIT

Sequences:

>Translated_344_residues
MAKRTTRSARVGICLYPGVWGSSASLAKDLIHIASVIAQARPGSGNIEARFLGAKPAEVTTAGGPLLRAEDAWDRVDVDV
LVLPSLAIPFMEPARQPPGLSDWIAGQHRRGCLVLALTTGSWLLAETGLLDGHTATTHWACLERCRRQYPRVNWTSEQRL
AVTGRLVTARDMSASATALCHAIGRVLSAPIAERTYQYSLIYEPGADALPLLHTIPLRDHGDAQVLMVQEWIETHYGEPV
AAEGVARMVHMSPRNLRRRFLDATGKTLVDYLTEVRLARARALLLSSNEAVSQIAYRVGYEDASTFTALFKKRHGLTPSA
YRKTSAGPAGLSPAYDGERRTAIT
>Mature_343_residues
AKRTTRSARVGICLYPGVWGSSASLAKDLIHIASVIAQARPGSGNIEARFLGAKPAEVTTAGGPLLRAEDAWDRVDVDVL
VLPSLAIPFMEPARQPPGLSDWIAGQHRRGCLVLALTTGSWLLAETGLLDGHTATTHWACLERCRRQYPRVNWTSEQRLA
VTGRLVTARDMSASATALCHAIGRVLSAPIAERTYQYSLIYEPGADALPLLHTIPLRDHGDAQVLMVQEWIETHYGEPVA
AEGVARMVHMSPRNLRRRFLDATGKTLVDYLTEVRLARARALLLSSNEAVSQIAYRVGYEDASTFTALFKKRHGLTPSAY
RKTSAGPAGLSPAYDGERRTAIT

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788725, Length=107, Percent_Identity=28.0373831775701, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1790339, Length=97, Percent_Identity=36.0824742268041, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37501; Mature: 37370

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRTTRSARVGICLYPGVWGSSASLAKDLIHIASVIAQARPGSGNIEARFLGAKPAEVT
CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEE
TAGGPLLRAEDAWDRVDVDVLVLPSLAIPFMEPARQPPGLSDWIAGQHRRGCLVLALTTG
ECCCCEEECCCCCCCCCEEEEEECCHHCCCHHHCCCCCCCHHHHCCCCCCCEEEEEEECC
SWLLAETGLLDGHTATTHWACLERCRRQYPRVNWTSEQRLAVTGRLVTARDMSASATALC
CEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHH
HAIGRVLSAPIAERTYQYSLIYEPGADALPLLHTIPLRDHGDAQVLMVQEWIETHYGEPV
HHHHHHHHCCHHHCCEEEEEEECCCCCCCCHHEEECCCCCCCCEEEEHHHHHHHHCCCCH
AAEGVARMVHMSPRNLRRRFLDATGKTLVDYLTEVRLARARALLLSSNEAVSQIAYRVGY
HHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
EDASTFTALFKKRHGLTPSAYRKTSAGPAGLSPAYDGERRTAIT
CCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKRTTRSARVGICLYPGVWGSSASLAKDLIHIASVIAQARPGSGNIEARFLGAKPAEVT
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEE
TAGGPLLRAEDAWDRVDVDVLVLPSLAIPFMEPARQPPGLSDWIAGQHRRGCLVLALTTG
ECCCCEEECCCCCCCCCEEEEEECCHHCCCHHHCCCCCCCHHHHCCCCCCCEEEEEEECC
SWLLAETGLLDGHTATTHWACLERCRRQYPRVNWTSEQRLAVTGRLVTARDMSASATALC
CEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHH
HAIGRVLSAPIAERTYQYSLIYEPGADALPLLHTIPLRDHGDAQVLMVQEWIETHYGEPV
HHHHHHHHCCHHHCCEEEEEEECCCCCCCCHHEEECCCCCCCCEEEEHHHHHHHHCCCCH
AAEGVARMVHMSPRNLRRRFLDATGKTLVDYLTEVRLARARALLLSSNEAVSQIAYRVGY
HHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
EDASTFTALFKKRHGLTPSAYRKTSAGPAGLSPAYDGERRTAIT
CCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]