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The map label for this gene is araC [C]

Identifier: 108759123

GI number: 108759123

Start: 507979

End: 508854

Strand: Direct

Name: araC [C]

Synonym: MXAN_0445

Alternate gene names: 108759123

Gene position: 507979-508854 (Clockwise)

Preceding gene: 108760020

Following gene: 108762011

Centisome position: 5.56

GC content: 72.95

Gene sequence:

>876_bases
ATGCCGTCCGAGCCACAACCGCCGTCCTGGGGGCCTGATTCGTCGTCGCGCCTGGACTTCGAAAAAGGGCGGCTGCCGAT
ATGGGCGGGGCGCCTTCAGGTCCACCCTCGGGGCGGGCGCGCCACCGCCGTGCACGCCTACGCCGTGGTGATGCTGGTGA
CGCGAGGCGAGTCGAAGATGCGGCACGCGGGGGACCTGGTGGTCCGGGCGGGAGACGTCCACCTGATTCCGCCCGGAGAT
GCACACGGCGCCGGCGCTTCGAACGCGGAAGGGTGGGGCGTGGCCTTCCATCCGGATGCCTTGGGCGAGGACGGTGGGGC
CGCGAACCGCCTGGGGCCGTTGCTGCGGGTGCGCAAGGGCTGTCACCCCGTGCTGCGGCCCACGCTGCCGCAGCGCCGGA
GGCTGGCGCGGTGGATGCGCCTGCTGTCGGAGGAGGTGGCCCGGAACGAGCCGGGGGGGGAGGAAGCCGCGCGCTCGCTG
CTGCGGCTGGTCCTCATCGAACTGGAGCGCATGACGGCCCAAACGGGGACGAGCGAGCCGCCGTCCCTGGGGCTGAGCCG
CAAGGCGCTCACGTACATCGAGACGCACTGTCTGGAGCCGCTGTCGCTCGCGCAGGTGGCGAAGGCGCTGGGGCGCTCCT
CCGCGCACGTCGCGGGCGTGGTGCGGCAGGAGACGGGCCGCACGGTGGGCGAGTGGATTCTGGAGTGCCGGATGGCGGAG
GCACGCCGCCGGCTGCGTGGCACGGACGAGCGCGTGGACATCATCGCGGAGCGCGTGGGCTACGCGGACGTGACGCACTT
CATCCGTCAGTTCCGCCGCGTCCACGGGGTGACTCCGGCCGCGTGGCGGCGCAAGGCGACGGCTGGGGCTCCATGA

Upstream 100 bases:

>100_bases
GCGGGCATGTTGAACCATGACCTGAACCTGGAACGGGCGGGCGCCGCGCATGGACCTGCTCAGGGTTGAGCCCGGCGGCT
TCGCTCGCTACGAAGGGGCG

Downstream 100 bases:

>100_bases
GCTGTCCCCTCCGAAAGTCACGGAGGGGGATGCCGAGACGTGCGGGGGTGAAGTAAGGGTTCTCTCTGGGCCCGGAGCCG
AGGGAGAGCCATGAAGAAGG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: AraC Family Transcriptional Regulator; Transcriptional Regulator; Two Component AraC Family Transcriptional Regulator; Two Component Transcriptional Regulator AraC Family; Two-Component Response Regulator; AraC Family Two Component Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator PobR; L-Rhamnose Operon Transcriptional Activator; Response Regulator Receiver Domain Protein; Transcriptional Regulator Arac Family; Transcriptional Regulatory Protein; AraC Type Helix-Turn-Helix- Domain-Containing Protein; Two Component Transcriptional Regulator Arac Family; Transcriptional Regulator Protein; Response Regulator Receiver Protein

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MPSEPQPPSWGPDSSSRLDFEKGRLPIWAGRLQVHPRGGRATAVHAYAVVMLVTRGESKMRHAGDLVVRAGDVHLIPPGD
AHGAGASNAEGWGVAFHPDALGEDGGAANRLGPLLRVRKGCHPVLRPTLPQRRRLARWMRLLSEEVARNEPGGEEAARSL
LRLVLIELERMTAQTGTSEPPSLGLSRKALTYIETHCLEPLSLAQVAKALGRSSAHVAGVVRQETGRTVGEWILECRMAE
ARRRLRGTDERVDIIAERVGYADVTHFIRQFRRVHGVTPAAWRRKATAGAP

Sequences:

>Translated_291_residues
MPSEPQPPSWGPDSSSRLDFEKGRLPIWAGRLQVHPRGGRATAVHAYAVVMLVTRGESKMRHAGDLVVRAGDVHLIPPGD
AHGAGASNAEGWGVAFHPDALGEDGGAANRLGPLLRVRKGCHPVLRPTLPQRRRLARWMRLLSEEVARNEPGGEEAARSL
LRLVLIELERMTAQTGTSEPPSLGLSRKALTYIETHCLEPLSLAQVAKALGRSSAHVAGVVRQETGRTVGEWILECRMAE
ARRRLRGTDERVDIIAERVGYADVTHFIRQFRRVHGVTPAAWRRKATAGAP
>Mature_290_residues
PSEPQPPSWGPDSSSRLDFEKGRLPIWAGRLQVHPRGGRATAVHAYAVVMLVTRGESKMRHAGDLVVRAGDVHLIPPGDA
HGAGASNAEGWGVAFHPDALGEDGGAANRLGPLLRVRKGCHPVLRPTLPQRRRLARWMRLLSEEVARNEPGGEEAARSLL
RLVLIELERMTAQTGTSEPPSLGLSRKALTYIETHCLEPLSLAQVAKALGRSSAHVAGVVRQETGRTVGEWILECRMAEA
RRRLRGTDERVDIIAERVGYADVTHFIRQFRRVHGVTPAAWRRKATAGAP

Specific function: This Protein Controls The Expression Of At Least Six Genes That Are Involved In The Transport And Catabolism Of L-Arabinose. It Regulates Initiation Of Transcription Of The Arabad Operon And It Also Controls Its Own Synthesis. The L- Arabinose Operon Dis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31799; Mature: 31668

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSEPQPPSWGPDSSSRLDFEKGRLPIWAGRLQVHPRGGRATAVHAYAVVMLVTRGESKM
CCCCCCCCCCCCCCCCCCCHHCCCCCEEECEEEEECCCCCCHHHHHHHHHHHHCCCCHHH
RHAGDLVVRAGDVHLIPPGDAHGAGASNAEGWGVAFHPDALGEDGGAANRLGPLLRVRKG
HHHCCEEEEECCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHC
CHPVLRPTLPQRRRLARWMRLLSEEVARNEPGGEEAARSLLRLVLIELERMTAQTGTSEP
CCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PSLGLSRKALTYIETHCLEPLSLAQVAKALGRSSAHVAGVVRQETGRTVGEWILECRMAE
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
ARRRLRGTDERVDIIAERVGYADVTHFIRQFRRVHGVTPAAWRRKATAGAP
HHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
PSEPQPPSWGPDSSSRLDFEKGRLPIWAGRLQVHPRGGRATAVHAYAVVMLVTRGESKM
CCCCCCCCCCCCCCCCCCHHCCCCCEEECEEEEECCCCCCHHHHHHHHHHHHCCCCHHH
RHAGDLVVRAGDVHLIPPGDAHGAGASNAEGWGVAFHPDALGEDGGAANRLGPLLRVRKG
HHHCCEEEEECCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHC
CHPVLRPTLPQRRRLARWMRLLSEEVARNEPGGEEAARSLLRLVLIELERMTAQTGTSEP
CCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PSLGLSRKALTYIETHCLEPLSLAQVAKALGRSSAHVAGVVRQETGRTVGEWILECRMAE
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
ARRRLRGTDERVDIIAERVGYADVTHFIRQFRRVHGVTPAAWRRKATAGAP
HHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA