| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108759075
Identifier: 108759075
GI number: 108759075
Start: 5296877
End: 5298262
Strand: Reverse
Name: 108759075
Synonym: MXAN_4303
Alternate gene names: NA
Gene position: 5298262-5296877 (Counterclockwise)
Preceding gene: 108758464
Following gene: 108760156
Centisome position: 57.97
GC content: 66.59
Gene sequence:
>1386_bases ATGGAACGTTGCGTCGTTTTGGATTTGCCTGGATTGAGCGCGAGGTATGTCGGCCCCTCGGCGCCAAACATGCAGGCATT CGTGGAGCGGGGGCGCATGGTGCCGCTCCAGCCCGTCCTGCCGGCGCTGAACTGCACCATGCAGGCGACGTTCCTGACCG GAAGATATCCCAGCGAGCACGGAATCGTCGGAGATGGATGGCTCAACCGGGAGTTGGGAGAGGTCCGCTTCTGGCCCCAA TCCGATGGGCTCGTGCAGACGCCGCAGCTCTGGGACGCCGCCCGCAAGCTCGACCCCAGCTTCACCTGCGCCCGCGTGTG CTGGTTCATGAACATGTATTCGAAGGCGGACTACGCCATCACGCCGCAGCCGTCCTTCACCGCGGACGGGCGGGTGGTGC CTGACGTGTTCACGGAGCCGCTCCACCTGCGCAAGCCGCTCGTCGAGGCGCTGGGGAACTTCCCCGCGTATGACTACTGG GGACCCCGCTACAGCATCCGCTCCTCGGAGTGGATCGCCGACGTCGCCATGTGGCTGGAGCAGCGGCACAGCCCCACGCT CTCACTCGTCTTCCTTCCGCACCTGGACTACACGCCGCACACGTTTGGACCGAACGCGAAGGAGATCCACAAGAGCCTCC GGGAGATCGACGACGTCGTCGGGAAGCTGATTGGCTTCTACGAGTCGCGCGGCGTGCGCGTCATCATCCTCTCGGAGTTC GGCGCGGTCCCCGTGTCCCGGGCCGTCCACCTGAACCGCCTCTTCCGCCGCCGAGGGTGGCTGGCGATCCGGGAAGAGGG CGGCCGTGACGTCGTCTATCCCAGCGGCAGTGAGGCGTTCGCCGTCGCGGACATGCAAATCGCGCACATCTATGTCCGGA ACCCGGCGCTCCTGGACGAGGTCAAGGCGCTGGTCGAGGCGGAGCCCGGGGTGGCCCAGGTGCTCGATGCCGAGGGCAAG CGCGCCCACCATCTGGACCACCCACGCTCGGGCGAGCTGGTGGCCCTGGCGGAACCGGATGCCTGGTTCACGTACTTCTA CTGGCTCGATGACGCGCGTGCGCCGGACTACGCGCGCACCGTCGATATCTACCGCAAGCCGGGCTACGACCCGCTGGAGA TGTTCGTGGACCCGAAGCTGGGTCTGCGCATGCTGGAACTGGGGGGCAGTGTCGTGAAGGAGAAGCTGGGCGTACGCTCG CGACTGGAGGTCGTCTCGATGGACGGCTCCCTCCTCAAAGGGGCGCATGGCCTGCCCACCGGCCCGGAGGATGGGCCGGT GCTGATGACACGACATGGCGAGCTGATCGAGGCAGAGACACTCCACGCTACGCAAGTCCACGACCTCATCCTGGCGCACC TGACCGGACAGCAGGCGGCGGCCTGA
Upstream 100 bases:
>100_bases GCTGACCTGGTCGAACTGGCTGAGCACTCATCTCAGACCAGGGTATGGGCCAACCTGGTCGGTGATTGACTGGTTTGCTC GTGAGCAGTTTGCTTCGGGC
Downstream 100 bases:
>100_bases ACGGCTTCCGCGAGCAACCCGAGCGTTGACGCTGCAAGAGGCGGGACACGGCATGAACAAACTTCCTGGGAGCGCCATTG TCATTGGCGCCAGCATCGGT
Product: type I phosphodiesterase/nucleotide pyrophosphatase family protein
Products: NA
Alternate protein names: Phosphodiesterase; Nucleotide Pyrophosphatase; Pyrophosphatase; Type I Phosphodiesterase Nucleotide Pyrophosphatase; Isopentenyl-Diphosphate Delta Isomerase; Phosphonoacetate Hydrolase ; Hydrolase; AP Superfamily Protein
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MERCVVLDLPGLSARYVGPSAPNMQAFVERGRMVPLQPVLPALNCTMQATFLTGRYPSEHGIVGDGWLNRELGEVRFWPQ SDGLVQTPQLWDAARKLDPSFTCARVCWFMNMYSKADYAITPQPSFTADGRVVPDVFTEPLHLRKPLVEALGNFPAYDYW GPRYSIRSSEWIADVAMWLEQRHSPTLSLVFLPHLDYTPHTFGPNAKEIHKSLREIDDVVGKLIGFYESRGVRVIILSEF GAVPVSRAVHLNRLFRRRGWLAIREEGGRDVVYPSGSEAFAVADMQIAHIYVRNPALLDEVKALVEAEPGVAQVLDAEGK RAHHLDHPRSGELVALAEPDAWFTYFYWLDDARAPDYARTVDIYRKPGYDPLEMFVDPKLGLRMLELGGSVVKEKLGVRS RLEVVSMDGSLLKGAHGLPTGPEDGPVLMTRHGELIEAETLHATQVHDLILAHLTGQQAAA
Sequences:
>Translated_461_residues MERCVVLDLPGLSARYVGPSAPNMQAFVERGRMVPLQPVLPALNCTMQATFLTGRYPSEHGIVGDGWLNRELGEVRFWPQ SDGLVQTPQLWDAARKLDPSFTCARVCWFMNMYSKADYAITPQPSFTADGRVVPDVFTEPLHLRKPLVEALGNFPAYDYW GPRYSIRSSEWIADVAMWLEQRHSPTLSLVFLPHLDYTPHTFGPNAKEIHKSLREIDDVVGKLIGFYESRGVRVIILSEF GAVPVSRAVHLNRLFRRRGWLAIREEGGRDVVYPSGSEAFAVADMQIAHIYVRNPALLDEVKALVEAEPGVAQVLDAEGK RAHHLDHPRSGELVALAEPDAWFTYFYWLDDARAPDYARTVDIYRKPGYDPLEMFVDPKLGLRMLELGGSVVKEKLGVRS RLEVVSMDGSLLKGAHGLPTGPEDGPVLMTRHGELIEAETLHATQVHDLILAHLTGQQAAA >Mature_461_residues MERCVVLDLPGLSARYVGPSAPNMQAFVERGRMVPLQPVLPALNCTMQATFLTGRYPSEHGIVGDGWLNRELGEVRFWPQ SDGLVQTPQLWDAARKLDPSFTCARVCWFMNMYSKADYAITPQPSFTADGRVVPDVFTEPLHLRKPLVEALGNFPAYDYW GPRYSIRSSEWIADVAMWLEQRHSPTLSLVFLPHLDYTPHTFGPNAKEIHKSLREIDDVVGKLIGFYESRGVRVIILSEF GAVPVSRAVHLNRLFRRRGWLAIREEGGRDVVYPSGSEAFAVADMQIAHIYVRNPALLDEVKALVEAEPGVAQVLDAEGK RAHHLDHPRSGELVALAEPDAWFTYFYWLDDARAPDYARTVDIYRKPGYDPLEMFVDPKLGLRMLELGGSVVKEKLGVRS RLEVVSMDGSLLKGAHGLPTGPEDGPVLMTRHGELIEAETLHATQVHDLILAHLTGQQAAA
Specific function: Unknown
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51523; Mature: 51523
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERCVVLDLPGLSARYVGPSAPNMQAFVERGRMVPLQPVLPALNCTMQATFLTGRYPSEH CCCEEEEECCCCCEEECCCCCCCHHHHHHCCCCCCHHHHHHHHCCEEEEEEEECCCCCCC GIVGDGWLNRELGEVRFWPQSDGLVQTPQLWDAARKLDPSFTCARVCWFMNMYSKADYAI CEECCCCCCCCCCCEEECCCCCCCEECHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEE TPQPSFTADGRVVPDVFTEPLHLRKPLVEALGNFPAYDYWGPRYSIRSSEWIADVAMWLE CCCCCCCCCCEECHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH QRHSPTLSLVFLPHLDYTPHTFGPNAKEIHKSLREIDDVVGKLIGFYESRGVRVIILSEF HCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC GAVPVSRAVHLNRLFRRRGWLAIREEGGRDVVYPSGSEAFAVADMQIAHIYVRNPALLDE CCCCHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCEEEEEEEEEEEEEECCCHHHHH VKALVEAEPGVAQVLDAEGKRAHHLDHPRSGELVALAEPDAWFTYFYWLDDARAPDYART HHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCHHHH VDIYRKPGYDPLEMFVDPKLGLRMLELGGSVVKEKLGVRSRLEVVSMDGSLLKGAHGLPT HHHHCCCCCCHHHHEECCHHCEEEEHHCHHHHHHHHCCHHHEEEEECCCHHHCCCCCCCC GPEDGPVLMTRHGELIEAETLHATQVHDLILAHLTGQQAAA CCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure MERCVVLDLPGLSARYVGPSAPNMQAFVERGRMVPLQPVLPALNCTMQATFLTGRYPSEH CCCEEEEECCCCCEEECCCCCCCHHHHHHCCCCCCHHHHHHHHCCEEEEEEEECCCCCCC GIVGDGWLNRELGEVRFWPQSDGLVQTPQLWDAARKLDPSFTCARVCWFMNMYSKADYAI CEECCCCCCCCCCCEEECCCCCCCEECHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEE TPQPSFTADGRVVPDVFTEPLHLRKPLVEALGNFPAYDYWGPRYSIRSSEWIADVAMWLE CCCCCCCCCCEECHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH QRHSPTLSLVFLPHLDYTPHTFGPNAKEIHKSLREIDDVVGKLIGFYESRGVRVIILSEF HCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC GAVPVSRAVHLNRLFRRRGWLAIREEGGRDVVYPSGSEAFAVADMQIAHIYVRNPALLDE CCCCHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCEEEEEEEEEEEEEECCCHHHHH VKALVEAEPGVAQVLDAEGKRAHHLDHPRSGELVALAEPDAWFTYFYWLDDARAPDYART HHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCHHHH VDIYRKPGYDPLEMFVDPKLGLRMLELGGSVVKEKLGVRSRLEVVSMDGSLLKGAHGLPT HHHHCCCCCCHHHHEECCHHCEEEEHHCHHHHHHHHCCHHHEEEEECCCHHHCCCCCCCC GPEDGPVLMTRHGELIEAETLHATQVHDLILAHLTGQQAAA CCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA