Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is 108759075

Identifier: 108759075

GI number: 108759075

Start: 5296877

End: 5298262

Strand: Reverse

Name: 108759075

Synonym: MXAN_4303

Alternate gene names: NA

Gene position: 5298262-5296877 (Counterclockwise)

Preceding gene: 108758464

Following gene: 108760156

Centisome position: 57.97

GC content: 66.59

Gene sequence:

>1386_bases
ATGGAACGTTGCGTCGTTTTGGATTTGCCTGGATTGAGCGCGAGGTATGTCGGCCCCTCGGCGCCAAACATGCAGGCATT
CGTGGAGCGGGGGCGCATGGTGCCGCTCCAGCCCGTCCTGCCGGCGCTGAACTGCACCATGCAGGCGACGTTCCTGACCG
GAAGATATCCCAGCGAGCACGGAATCGTCGGAGATGGATGGCTCAACCGGGAGTTGGGAGAGGTCCGCTTCTGGCCCCAA
TCCGATGGGCTCGTGCAGACGCCGCAGCTCTGGGACGCCGCCCGCAAGCTCGACCCCAGCTTCACCTGCGCCCGCGTGTG
CTGGTTCATGAACATGTATTCGAAGGCGGACTACGCCATCACGCCGCAGCCGTCCTTCACCGCGGACGGGCGGGTGGTGC
CTGACGTGTTCACGGAGCCGCTCCACCTGCGCAAGCCGCTCGTCGAGGCGCTGGGGAACTTCCCCGCGTATGACTACTGG
GGACCCCGCTACAGCATCCGCTCCTCGGAGTGGATCGCCGACGTCGCCATGTGGCTGGAGCAGCGGCACAGCCCCACGCT
CTCACTCGTCTTCCTTCCGCACCTGGACTACACGCCGCACACGTTTGGACCGAACGCGAAGGAGATCCACAAGAGCCTCC
GGGAGATCGACGACGTCGTCGGGAAGCTGATTGGCTTCTACGAGTCGCGCGGCGTGCGCGTCATCATCCTCTCGGAGTTC
GGCGCGGTCCCCGTGTCCCGGGCCGTCCACCTGAACCGCCTCTTCCGCCGCCGAGGGTGGCTGGCGATCCGGGAAGAGGG
CGGCCGTGACGTCGTCTATCCCAGCGGCAGTGAGGCGTTCGCCGTCGCGGACATGCAAATCGCGCACATCTATGTCCGGA
ACCCGGCGCTCCTGGACGAGGTCAAGGCGCTGGTCGAGGCGGAGCCCGGGGTGGCCCAGGTGCTCGATGCCGAGGGCAAG
CGCGCCCACCATCTGGACCACCCACGCTCGGGCGAGCTGGTGGCCCTGGCGGAACCGGATGCCTGGTTCACGTACTTCTA
CTGGCTCGATGACGCGCGTGCGCCGGACTACGCGCGCACCGTCGATATCTACCGCAAGCCGGGCTACGACCCGCTGGAGA
TGTTCGTGGACCCGAAGCTGGGTCTGCGCATGCTGGAACTGGGGGGCAGTGTCGTGAAGGAGAAGCTGGGCGTACGCTCG
CGACTGGAGGTCGTCTCGATGGACGGCTCCCTCCTCAAAGGGGCGCATGGCCTGCCCACCGGCCCGGAGGATGGGCCGGT
GCTGATGACACGACATGGCGAGCTGATCGAGGCAGAGACACTCCACGCTACGCAAGTCCACGACCTCATCCTGGCGCACC
TGACCGGACAGCAGGCGGCGGCCTGA

Upstream 100 bases:

>100_bases
GCTGACCTGGTCGAACTGGCTGAGCACTCATCTCAGACCAGGGTATGGGCCAACCTGGTCGGTGATTGACTGGTTTGCTC
GTGAGCAGTTTGCTTCGGGC

Downstream 100 bases:

>100_bases
ACGGCTTCCGCGAGCAACCCGAGCGTTGACGCTGCAAGAGGCGGGACACGGCATGAACAAACTTCCTGGGAGCGCCATTG
TCATTGGCGCCAGCATCGGT

Product: type I phosphodiesterase/nucleotide pyrophosphatase family protein

Products: NA

Alternate protein names: Phosphodiesterase; Nucleotide Pyrophosphatase; Pyrophosphatase; Type I Phosphodiesterase Nucleotide Pyrophosphatase; Isopentenyl-Diphosphate Delta Isomerase; Phosphonoacetate Hydrolase ; Hydrolase; AP Superfamily Protein

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MERCVVLDLPGLSARYVGPSAPNMQAFVERGRMVPLQPVLPALNCTMQATFLTGRYPSEHGIVGDGWLNRELGEVRFWPQ
SDGLVQTPQLWDAARKLDPSFTCARVCWFMNMYSKADYAITPQPSFTADGRVVPDVFTEPLHLRKPLVEALGNFPAYDYW
GPRYSIRSSEWIADVAMWLEQRHSPTLSLVFLPHLDYTPHTFGPNAKEIHKSLREIDDVVGKLIGFYESRGVRVIILSEF
GAVPVSRAVHLNRLFRRRGWLAIREEGGRDVVYPSGSEAFAVADMQIAHIYVRNPALLDEVKALVEAEPGVAQVLDAEGK
RAHHLDHPRSGELVALAEPDAWFTYFYWLDDARAPDYARTVDIYRKPGYDPLEMFVDPKLGLRMLELGGSVVKEKLGVRS
RLEVVSMDGSLLKGAHGLPTGPEDGPVLMTRHGELIEAETLHATQVHDLILAHLTGQQAAA

Sequences:

>Translated_461_residues
MERCVVLDLPGLSARYVGPSAPNMQAFVERGRMVPLQPVLPALNCTMQATFLTGRYPSEHGIVGDGWLNRELGEVRFWPQ
SDGLVQTPQLWDAARKLDPSFTCARVCWFMNMYSKADYAITPQPSFTADGRVVPDVFTEPLHLRKPLVEALGNFPAYDYW
GPRYSIRSSEWIADVAMWLEQRHSPTLSLVFLPHLDYTPHTFGPNAKEIHKSLREIDDVVGKLIGFYESRGVRVIILSEF
GAVPVSRAVHLNRLFRRRGWLAIREEGGRDVVYPSGSEAFAVADMQIAHIYVRNPALLDEVKALVEAEPGVAQVLDAEGK
RAHHLDHPRSGELVALAEPDAWFTYFYWLDDARAPDYARTVDIYRKPGYDPLEMFVDPKLGLRMLELGGSVVKEKLGVRS
RLEVVSMDGSLLKGAHGLPTGPEDGPVLMTRHGELIEAETLHATQVHDLILAHLTGQQAAA
>Mature_461_residues
MERCVVLDLPGLSARYVGPSAPNMQAFVERGRMVPLQPVLPALNCTMQATFLTGRYPSEHGIVGDGWLNRELGEVRFWPQ
SDGLVQTPQLWDAARKLDPSFTCARVCWFMNMYSKADYAITPQPSFTADGRVVPDVFTEPLHLRKPLVEALGNFPAYDYW
GPRYSIRSSEWIADVAMWLEQRHSPTLSLVFLPHLDYTPHTFGPNAKEIHKSLREIDDVVGKLIGFYESRGVRVIILSEF
GAVPVSRAVHLNRLFRRRGWLAIREEGGRDVVYPSGSEAFAVADMQIAHIYVRNPALLDEVKALVEAEPGVAQVLDAEGK
RAHHLDHPRSGELVALAEPDAWFTYFYWLDDARAPDYARTVDIYRKPGYDPLEMFVDPKLGLRMLELGGSVVKEKLGVRS
RLEVVSMDGSLLKGAHGLPTGPEDGPVLMTRHGELIEAETLHATQVHDLILAHLTGQQAAA

Specific function: Unknown

COG id: COG1524

COG function: function code R; Uncharacterized proteins of the AP superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51523; Mature: 51523

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERCVVLDLPGLSARYVGPSAPNMQAFVERGRMVPLQPVLPALNCTMQATFLTGRYPSEH
CCCEEEEECCCCCEEECCCCCCCHHHHHHCCCCCCHHHHHHHHCCEEEEEEEECCCCCCC
GIVGDGWLNRELGEVRFWPQSDGLVQTPQLWDAARKLDPSFTCARVCWFMNMYSKADYAI
CEECCCCCCCCCCCEEECCCCCCCEECHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEE
TPQPSFTADGRVVPDVFTEPLHLRKPLVEALGNFPAYDYWGPRYSIRSSEWIADVAMWLE
CCCCCCCCCCEECHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
QRHSPTLSLVFLPHLDYTPHTFGPNAKEIHKSLREIDDVVGKLIGFYESRGVRVIILSEF
HCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
GAVPVSRAVHLNRLFRRRGWLAIREEGGRDVVYPSGSEAFAVADMQIAHIYVRNPALLDE
CCCCHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCEEEEEEEEEEEEEECCCHHHHH
VKALVEAEPGVAQVLDAEGKRAHHLDHPRSGELVALAEPDAWFTYFYWLDDARAPDYART
HHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCHHHH
VDIYRKPGYDPLEMFVDPKLGLRMLELGGSVVKEKLGVRSRLEVVSMDGSLLKGAHGLPT
HHHHCCCCCCHHHHEECCHHCEEEEHHCHHHHHHHHCCHHHEEEEECCCHHHCCCCCCCC
GPEDGPVLMTRHGELIEAETLHATQVHDLILAHLTGQQAAA
CCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure
MERCVVLDLPGLSARYVGPSAPNMQAFVERGRMVPLQPVLPALNCTMQATFLTGRYPSEH
CCCEEEEECCCCCEEECCCCCCCHHHHHHCCCCCCHHHHHHHHCCEEEEEEEECCCCCCC
GIVGDGWLNRELGEVRFWPQSDGLVQTPQLWDAARKLDPSFTCARVCWFMNMYSKADYAI
CEECCCCCCCCCCCEEECCCCCCCEECHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEE
TPQPSFTADGRVVPDVFTEPLHLRKPLVEALGNFPAYDYWGPRYSIRSSEWIADVAMWLE
CCCCCCCCCCEECHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
QRHSPTLSLVFLPHLDYTPHTFGPNAKEIHKSLREIDDVVGKLIGFYESRGVRVIILSEF
HCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
GAVPVSRAVHLNRLFRRRGWLAIREEGGRDVVYPSGSEAFAVADMQIAHIYVRNPALLDE
CCCCHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCEEEEEEEEEEEEEECCCHHHHH
VKALVEAEPGVAQVLDAEGKRAHHLDHPRSGELVALAEPDAWFTYFYWLDDARAPDYART
HHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCHHHH
VDIYRKPGYDPLEMFVDPKLGLRMLELGGSVVKEKLGVRSRLEVVSMDGSLLKGAHGLPT
HHHHCCCCCCHHHHEECCHHCEEEEHHCHHHHHHHHCCHHHEEEEECCCHHHCCCCCCCC
GPEDGPVLMTRHGELIEAETLHATQVHDLILAHLTGQQAAA
CCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA