Click here to switch to the map view.

The map label for this gene is tpn32 [H]

Identifier: 108759039

GI number: 108759039

Start: 1115564

End: 1116397

Strand: Reverse

Name: tpn32 [H]

Synonym: MXAN_0966

Alternate gene names: 108759039

Gene position: 1116397-1115564 (Counterclockwise)

Preceding gene: 108761098

Following gene: 108756946

Centisome position: 12.21

GC content: 69.66

Gene sequence:

>834_bases
ATGAAGTCCCCCTCTCGTTCCCTGCTCACCCCGCTGCTGCTCTCCGTGACGCTGCTGCTCACGGCCTGCCAGAAGCAGGA
GGCGTCCTCGGGCGAGTCTTCCGGCGTCCGCACGTTGAAGGTCGGCGTCAACCCGGTTCCCCACGGAGACATTCTCCGCG
CCGCCGCCGCAGTGGCCCTGCGCGAGGGCGTGCGCGTCGACGTGGTGGAGTTCACCGACTACGTCCAGCCGAACATCGCG
CTGTCTGACAAACAGCTCGACGCCAACTACTTCCAGCACGTGCCCTACCTGGAGCGCTTCGCCGGAGACAGGAAGCTCGC
GTTGACGAGCGCCGGCCCGGTGCACCTGGAGCCCCTGGCGCTCTACTCCACGAAGTTCCGTCAGCTCGCGGAGCTTCCGG
AGGGCGCGCAGGTGACGCTGCCCGCCGACCCCAGCAACCTGGCGCGGGCGCTGCGCCTGCTCGAAGCCCAGGGTCTGCTG
CGCCTGCGCGAAGACGCGGGCGCCACGGCGACGGTGCGGGACGTGGTGGGCAACCCGCGCAAGCTCGACCTGCGGGAGAT
TGATGCGGAGCAGCAGCCTCGCACGCTGGAGGACGTGGCCGCCGCCGTCATCAACGGCAACTACTTCCTGGAGGCCCAGA
AGCACCTGAAGCTGGACGCGAAGGTGCTGGCCCGCGAGGCGGCGCGGGAGAACCCCTACGCCAATGTGCTCGCCGTGCGT
CAGGGTGACGAGCAGCGCCCCGAGGTGCGCACGCTGGTGAAGGCGCTCCAGTCCGACGACGTGCGCCGCTACATCGAGTC
CACCTACGGCGGCGCGGTGGTGCCCGCCTTCTGA

Upstream 100 bases:

>100_bases
ATGGCTGGGTGACGCGCTGGCCTCCCGCTTCGACCACACCGGCGCGCGCTCGTCGCGCTGACGCGCCCTCTCCTCCCCGC
TGCCCCTGGAGTCTTCCGAC

Downstream 100 bases:

>100_bases
CGGACGCCACGTCTTCCTTGCGCGCCGTGCCCGGTCCGAGCATGACAGGGGCTCGCGCGCGGGGCCCTCCCAGCCCCGCC
AGGCGAGGGAGCGAGCACAT

Product: NLPA family lipoprotein

Products: NA

Alternate protein names: 29 kDa protein [H]

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKSPSRSLLTPLLLSVTLLLTACQKQEASSGESSGVRTLKVGVNPVPHGDILRAAAAVALREGVRVDVVEFTDYVQPNIA
LSDKQLDANYFQHVPYLERFAGDRKLALTSAGPVHLEPLALYSTKFRQLAELPEGAQVTLPADPSNLARALRLLEAQGLL
RLREDAGATATVRDVVGNPRKLDLREIDAEQQPRTLEDVAAAVINGNYFLEAQKHLKLDAKVLAREAARENPYANVLAVR
QGDEQRPEVRTLVKALQSDDVRRYIESTYGGAVVPAF

Sequences:

>Translated_277_residues
MKSPSRSLLTPLLLSVTLLLTACQKQEASSGESSGVRTLKVGVNPVPHGDILRAAAAVALREGVRVDVVEFTDYVQPNIA
LSDKQLDANYFQHVPYLERFAGDRKLALTSAGPVHLEPLALYSTKFRQLAELPEGAQVTLPADPSNLARALRLLEAQGLL
RLREDAGATATVRDVVGNPRKLDLREIDAEQQPRTLEDVAAAVINGNYFLEAQKHLKLDAKVLAREAARENPYANVLAVR
QGDEQRPEVRTLVKALQSDDVRRYIESTYGGAVVPAF
>Mature_277_residues
MKSPSRSLLTPLLLSVTLLLTACQKQEASSGESSGVRTLKVGVNPVPHGDILRAAAAVALREGVRVDVVEFTDYVQPNIA
LSDKQLDANYFQHVPYLERFAGDRKLALTSAGPVHLEPLALYSTKFRQLAELPEGAQVTLPADPSNLARALRLLEAQGLL
RLREDAGATATVRDVVGNPRKLDLREIDAEQQPRTLEDVAAAVINGNYFLEAQKHLKLDAKVLAREAARENPYANVLAVR
QGDEQRPEVRTLVKALQSDDVRRYIESTYGGAVVPAF

Specific function: Unknown

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=264, Percent_Identity=37.1212121212121, Blast_Score=157, Evalue=9e-40,
Organism=Escherichia coli, GI1790093, Length=248, Percent_Identity=33.4677419354839, Blast_Score=140, Evalue=7e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 30265; Mature: 30265

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSPSRSLLTPLLLSVTLLLTACQKQEASSGESSGVRTLKVGVNPVPHGDILRAAAAVAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
REGVRVDVVEFTDYVQPNIALSDKQLDANYFQHVPYLERFAGDRKLALTSAGPVHLEPLA
HCCCEEEEEEHHHHCCCCCEECCCHHCHHHHHHCCHHHHHCCCCEEEEECCCCCEECHHH
LYSTKFRQLAELPEGAQVTLPADPSNLARALRLLEAQGLLRLREDAGATATVRDVVGNPR
HHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCC
KLDLREIDAEQQPRTLEDVAAAVINGNYFLEAQKHLKLDAKVLAREAARENPYANVLAVR
CCCHHHCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEE
QGDEQRPEVRTLVKALQSDDVRRYIESTYGGAVVPAF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC
>Mature Secondary Structure
MKSPSRSLLTPLLLSVTLLLTACQKQEASSGESSGVRTLKVGVNPVPHGDILRAAAAVAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
REGVRVDVVEFTDYVQPNIALSDKQLDANYFQHVPYLERFAGDRKLALTSAGPVHLEPLA
HCCCEEEEEEHHHHCCCCCEECCCHHCHHHHHHCCHHHHHCCCCEEEEECCCCCEECHHH
LYSTKFRQLAELPEGAQVTLPADPSNLARALRLLEAQGLLRLREDAGATATVRDVVGNPR
HHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCC
KLDLREIDAEQQPRTLEDVAAAVINGNYFLEAQKHLKLDAKVLAREAARENPYANVLAVR
CCCHHHCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEE
QGDEQRPEVRTLVKALQSDDVRRYIESTYGGAVVPAF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]