Click here to switch to the map view.

The map label for this gene is kaiC [H]

Identifier: 108758956

GI number: 108758956

Start: 809002

End: 810477

Strand: Direct

Name: kaiC [H]

Synonym: MXAN_0709

Alternate gene names: 108758956

Gene position: 809002-810477 (Clockwise)

Preceding gene: 108763607

Following gene: 108757824

Centisome position: 8.85

GC content: 67.82

Gene sequence:

>1476_bases
ATGTCCTCTTCCGAGCAACCCGCACGGCAGGACGCACGCGTATCGACTGGCGTGCCTGGGCTTGACGCCGTGCTGGGCGG
CGGGCTCGTGTCGTCGGGTGTCTACATCTTCGTGGGGGAGCCGGGCGCGGGGAAGACGCTCTTCGCCAACCAGCTCTGCT
ACCACCAGGGGCGCGCCGGCGCGCGGTGCCTGTATGTCACGCTGCTGGCGGAGTCCCACGCTCGCATGCTGGCCAACATG
CGGGACATGGCCTTCTTCGACTCGGCGCTGCTGCCCGAGGGCGTCTACTACGTCAGCGGCTTCCGCACGCTGGAGGAGCA
CGGGCTGCCGGGGTTGCTGGAGCTCTTGCGGCGCGAGGTGCGCAACCACAACGCCAGCATCCTGGTGCTGGATGGCCTGG
TGCAGGCGCAGGAGGCGGCCGGCAGCAGCCGCGACTTCAAGAAGTTCATCCACGAGCTCCAGGTCGCCGCCGGGCTGACG
CGCTTCACGGCGCTGCTGCTCACCAGCGCTAACGGTCCCGCCGTCCATCCGGAATACACCATGGTGGATGGCATCCTGGA
GCTGCGCGAGCGCACCCAGGGCGTGCGCTCCTGGCGCGAGCTGCAAGTGCGCAAGTTCCGGGGGAGCCCCACGCTGCACG
GCGTCCACGCCTTCCGCATCACCAGCGACGGGTTGGAGGTCTTCCCCCGGTTGGAGTCGCGGGTGCAGCGCACGCCGCCG
CCGGACCCGGGCGCCCACCGCCTCCACTTCGGCGTTCCGTCCCTGGACGCGCTCTTCCCGGAGGGGCTGGCGGCGGGGTC
CACCTCCCTGCTGCTCGGTCCACCTGGCGCGGGCAAGACGCTGCTGGGATGCAGCTTGCTGGCAGAGGGTCTGAAGCAGG
GCGAGCACTGTCTGTACATGGGCTTCTACGAGCCGCCCAACCGGCTGTTGGGCAAGGTTGCATCCGCGGGTATCGACCTG
GGCGGCGCTATGGCGGATGGACGGCTCAACTTCATCTGGCAGCCGCCTTCCGAGTGCATTCTCGACGTGTTGGCGGACCA
GCTCCTGTCGGACGTTCGGCGGCGCAACGTGAAGCGGGTGTTCGTGGACGGGCTCAGCGCCATGCAACAGGCCTCGCCCG
AGCCCGCGCGCATCAATTCGTTCTTCGCGGCCCTCACCCAGGAGCTGCGTTGCACGGGGACCACCACCCTCTTCGGCATG
GAGACACCGCGGCTCTTCGGTCCGGTGCTGGACGTCCCGATGGAGGTGGGTCCTTCCGCTGTGGCGGAGAACCTCTTTTT
CCTGAGACATGTCGAGCTCGAAGGCCGCCTGCGCAGGCTGCTGAGCATCTTCAAGATGCGTGACACCCACTATGACCCCA
CCCTGAGGGAGTTCGTCATCACACCCCAGGGAATCGAGGTGCTGCCCCCCTTCAGTGTCGCTGTGGATACCCTGCTCACG
GGACTTGCCCGGCACCCGGGCACTGGCCATTTCTGA

Upstream 100 bases:

>100_bases
CGCCGACCGCTGAGGCCCTTTCGCTGTTCACGGCCCGCGCGGTTCTCTTCTCACATTCCGAGGCGCGCGCTGGGGCGAAT
TACGGTATGGAACGGACATC

Downstream 100 bases:

>100_bases
ACGAACGTCGAGGAGTAGTACCACCCGTATGGAGACGGTCCTGGTGGTGGATGACGAGCAGGGCATCCTGGAAGCCCTGG
CGGACCTCCTTCGGGAGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 490

Protein sequence:

>491_residues
MSSSEQPARQDARVSTGVPGLDAVLGGGLVSSGVYIFVGEPGAGKTLFANQLCYHQGRAGARCLYVTLLAESHARMLANM
RDMAFFDSALLPEGVYYVSGFRTLEEHGLPGLLELLRREVRNHNASILVLDGLVQAQEAAGSSRDFKKFIHELQVAAGLT
RFTALLLTSANGPAVHPEYTMVDGILELRERTQGVRSWRELQVRKFRGSPTLHGVHAFRITSDGLEVFPRLESRVQRTPP
PDPGAHRLHFGVPSLDALFPEGLAAGSTSLLLGPPGAGKTLLGCSLLAEGLKQGEHCLYMGFYEPPNRLLGKVASAGIDL
GGAMADGRLNFIWQPPSECILDVLADQLLSDVRRRNVKRVFVDGLSAMQQASPEPARINSFFAALTQELRCTGTTTLFGM
ETPRLFGPVLDVPMEVGPSAVAENLFFLRHVELEGRLRRLLSIFKMRDTHYDPTLREFVITPQGIEVLPPFSVAVDTLLT
GLARHPGTGHF

Sequences:

>Translated_491_residues
MSSSEQPARQDARVSTGVPGLDAVLGGGLVSSGVYIFVGEPGAGKTLFANQLCYHQGRAGARCLYVTLLAESHARMLANM
RDMAFFDSALLPEGVYYVSGFRTLEEHGLPGLLELLRREVRNHNASILVLDGLVQAQEAAGSSRDFKKFIHELQVAAGLT
RFTALLLTSANGPAVHPEYTMVDGILELRERTQGVRSWRELQVRKFRGSPTLHGVHAFRITSDGLEVFPRLESRVQRTPP
PDPGAHRLHFGVPSLDALFPEGLAAGSTSLLLGPPGAGKTLLGCSLLAEGLKQGEHCLYMGFYEPPNRLLGKVASAGIDL
GGAMADGRLNFIWQPPSECILDVLADQLLSDVRRRNVKRVFVDGLSAMQQASPEPARINSFFAALTQELRCTGTTTLFGM
ETPRLFGPVLDVPMEVGPSAVAENLFFLRHVELEGRLRRLLSIFKMRDTHYDPTLREFVITPQGIEVLPPFSVAVDTLLT
GLARHPGTGHF
>Mature_490_residues
SSSEQPARQDARVSTGVPGLDAVLGGGLVSSGVYIFVGEPGAGKTLFANQLCYHQGRAGARCLYVTLLAESHARMLANMR
DMAFFDSALLPEGVYYVSGFRTLEEHGLPGLLELLRREVRNHNASILVLDGLVQAQEAAGSSRDFKKFIHELQVAAGLTR
FTALLLTSANGPAVHPEYTMVDGILELRERTQGVRSWRELQVRKFRGSPTLHGVHAFRITSDGLEVFPRLESRVQRTPPP
DPGAHRLHFGVPSLDALFPEGLAAGSTSLLLGPPGAGKTLLGCSLLAEGLKQGEHCLYMGFYEPPNRLLGKVASAGIDLG
GAMADGRLNFIWQPPSECILDVLADQLLSDVRRRNVKRVFVDGLSAMQQASPEPARINSFFAALTQELRCTGTTTLFGME
TPRLFGPVLDVPMEVGPSAVAENLFFLRHVELEGRLRRLLSIFKMRDTHYDPTLREFVITPQGIEVLPPFSVAVDTLLTG
LARHPGTGHF

Specific function: Core component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by actin

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 kaiC domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014774
- InterPro:   IPR013503
- InterPro:   IPR004504
- InterPro:   IPR010624 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: =2.7.11.1 [H]

Molecular weight: Translated: 53466; Mature: 53335

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: PS51146 KAIC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSEQPARQDARVSTGVPGLDAVLGGGLVSSGVYIFVGEPGAGKTLFANQLCYHQGRAG
CCCCCCCCHHCCCHHCCCCCHHHHHCCHHHHCCEEEEEECCCCCCHHHHHHHHHHCCCCC
ARCLYVTLLAESHARMLANMRDMAFFDSALLPEGVYYVSGFRTLEEHGLPGLLELLRREV
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCHHHHHHHHHHH
RNHNASILVLDGLVQAQEAAGSSRDFKKFIHELQVAAGLTRFTALLLTSANGPAVHPEYT
HCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
MVDGILELRERTQGVRSWRELQVRKFRGSPTLHGVHAFRITSDGLEVFPRLESRVQRTPP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECEEEEEEECCHHHHHHHHHHHHCCCCC
PDPGAHRLHFGVPSLDALFPEGLAAGSTSLLLGPPGAGKTLLGCSLLAEGLKQGEHCLYM
CCCCCCEEEECCCCHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEE
GFYEPPNRLLGKVASAGIDLGGAMADGRLNFIWQPPSECILDVLADQLLSDVRRRNVKRV
ECCCCHHHHHHHHHHCCCCCCCEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
FVDGLSAMQQASPEPARINSFFAALTQELRCTGTTTLFGMETPRLFGPVLDVPMEVGPSA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCHHCCHHH
VAENLFFLRHVELEGRLRRLLSIFKMRDTHYDPTLREFVITPQGIEVLPPFSVAVDTLLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCEECCCHHHHHHHHHH
GLARHPGTGHF
HHHCCCCCCCC
>Mature Secondary Structure 
SSSEQPARQDARVSTGVPGLDAVLGGGLVSSGVYIFVGEPGAGKTLFANQLCYHQGRAG
CCCCCCCHHCCCHHCCCCCHHHHHCCHHHHCCEEEEEECCCCCCHHHHHHHHHHCCCCC
ARCLYVTLLAESHARMLANMRDMAFFDSALLPEGVYYVSGFRTLEEHGLPGLLELLRREV
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCHHHHHHHHHHH
RNHNASILVLDGLVQAQEAAGSSRDFKKFIHELQVAAGLTRFTALLLTSANGPAVHPEYT
HCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
MVDGILELRERTQGVRSWRELQVRKFRGSPTLHGVHAFRITSDGLEVFPRLESRVQRTPP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECEEEEEEECCHHHHHHHHHHHHCCCCC
PDPGAHRLHFGVPSLDALFPEGLAAGSTSLLLGPPGAGKTLLGCSLLAEGLKQGEHCLYM
CCCCCCEEEECCCCHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEE
GFYEPPNRLLGKVASAGIDLGGAMADGRLNFIWQPPSECILDVLADQLLSDVRRRNVKRV
ECCCCHHHHHHHHHHCCCCCCCEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
FVDGLSAMQQASPEPARINSFFAALTQELRCTGTTTLFGMETPRLFGPVLDVPMEVGPSA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCHHCCHHH
VAENLFFLRHVELEGRLRRLLSIFKMRDTHYDPTLREFVITPQGIEVLPPFSVAVDTLLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCEECCCHHHHHHHHHH
GLARHPGTGHF
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA