| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is cheY4 [H]
Identifier: 108758942
GI number: 108758942
Start: 3132171
End: 3132554
Strand: Direct
Name: cheY4 [H]
Synonym: MXAN_2684
Alternate gene names: 108758942
Gene position: 3132171-3132554 (Clockwise)
Preceding gene: 108757399
Following gene: 108760558
Centisome position: 34.27
GC content: 60.16
Gene sequence:
>384_bases ATGAACGCAAAGGTGCTCATCGTCGAAGACACGAAGACCATCACCAACCTTCTTCAGGTGTACCTGATGGGGTGGGGGTT GGAGTTCTTCGACGCTCCGAATGGAGCGATTGGATTGACCAAGGCGCGGGAGCTCAAGCCGGACCTCATCATCTCCGATG TGCAGATGCCGGAGATGGATGGCTTCGCGCTGTGCGCGGCGATCCGTGCGGACCGGCAACTTCACGACACCCCTTTCATG ATGCTCACGTCGCTGAAGGACGACGCGAGCCGGCAGAAGGGCAAGCTGGTGGGTGCCAGCGCCTTCCTCAACAAGCCGGT GTCCGTGGACGACCTTCGTTCGAAGGTGCGCGATATCCTGAAGCTCCCTGCGACCCGGTACTGA
Upstream 100 bases:
>100_bases TGGGAGACTCGGTGGAGAGCACCCGGCGCATCGAACAGGTGTCAGGCAATCTGACCAATCTCTCGAAACGGTTCTCGGAC CTGGTGGGTAGGTACCAGTT
Downstream 100 bases:
>100_bases GCGCATGTCGAAAGACGACGCCAAGATTGATTACACCGGGCTGCGACGCCAGCTCACCGAGGCGCACTCGCTGCTGGACG GCAAGCAGGGTGTGAGCCCC
Product: response regulator CheY4
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MNAKVLIVEDTKTITNLLQVYLMGWGLEFFDAPNGAIGLTKARELKPDLIISDVQMPEMDGFALCAAIRADRQLHDTPFM MLTSLKDDASRQKGKLVGASAFLNKPVSVDDLRSKVRDILKLPATRY
Sequences:
>Translated_127_residues MNAKVLIVEDTKTITNLLQVYLMGWGLEFFDAPNGAIGLTKARELKPDLIISDVQMPEMDGFALCAAIRADRQLHDTPFM MLTSLKDDASRQKGKLVGASAFLNKPVSVDDLRSKVRDILKLPATRY >Mature_127_residues MNAKVLIVEDTKTITNLLQVYLMGWGLEFFDAPNGAIGLTKARELKPDLIISDVQMPEMDGFALCAAIRADRQLHDTPFM MLTSLKDDASRQKGKLVGASAFLNKPVSVDDLRSKVRDILKLPATRY
Specific function: Member of the two-component regulatory system phoP/phoR involved in the regulation of alkaline phosphatase genes phoA and phoB and of phosphodiesterase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786911, Length=118, Percent_Identity=33.8983050847458, Blast_Score=65, Evalue=1e-12, Organism=Escherichia coli, GI1790860, Length=121, Percent_Identity=34.7107438016529, Blast_Score=61, Evalue=2e-11, Organism=Escherichia coli, GI1788394, Length=118, Percent_Identity=32.2033898305085, Blast_Score=60, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 14110; Mature: 14110
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAKVLIVEDTKTITNLLQVYLMGWGLEFFDAPNGAIGLTKARELKPDLIISDVQMPEMD CCCEEEEEECHHHHHHHHHHHHHHCCCCEEECCCCCEECCCHHHCCCCEEEECCCCCCCC GFALCAAIRADRQLHDTPFMMLTSLKDDASRQKGKLVGASAFLNKPVSVDDLRSKVRDIL CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEECHHHHHCCCCCHHHHHHHHHHHH KLPATRY HCCCCCC >Mature Secondary Structure MNAKVLIVEDTKTITNLLQVYLMGWGLEFFDAPNGAIGLTKARELKPDLIISDVQMPEMD CCCEEEEEECHHHHHHHHHHHHHHCCCCEEECCCCCEECCCHHHCCCCEEEECCCCCCCC GFALCAAIRADRQLHDTPFMMLTSLKDDASRQKGKLVGASAFLNKPVSVDDLRSKVRDIL CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEECHHHHHCCCCCHHHHHHHHHHHH KLPATRY HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1454550; 3036763; 9387221; 9384377; 8045898; 3142862 [H]