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The map label for this gene is socA2 [H]

Identifier: 108758857

GI number: 108758857

Start: 6503247

End: 6503564

Strand: Direct

Name: socA2 [H]

Synonym: MXAN_5209

Alternate gene names: 108758857

Gene position: 6503247-6503564 (Clockwise)

Preceding gene: 108758238

Following gene: 108759491

Centisome position: 71.15

GC content: 63.52

Gene sequence:

>318_bases
ATGGCATGGATTGTGTTGATATTGGCCGGGTGTCTGGAGATCGCCTGGGCGCTCGCGCTCAAGCGAGCCGACGGCCTGAC
CCGGTTCTGGCCCAGTGTCATCGGCATCGGCCTCGCCATGGTCAGCCTGGTGCTGCTGTCGCTCGCCTTGAAGCAGCTGC
CCGTCGGAACGGCCTACGATGTCTGGGTGGGGATGGGCATGTGCGGCGTCGCGGTCTTCGGCATGCTATTTCTCGGCGAA
CAGGTCTCGGCACCACGTATCTTCTTCCTGGTGATGATCGGCATCGGCGTCGCTGGCCTGCGGGCAATCGAGCGATGA

Upstream 100 bases:

>100_bases
TCGGGCACCTGGCGAGTGCCAGCGGGCGATTCATCACAGGCACCTCTATCGCGGTCGATGGTGGCTTTTCGGCTTGAAGC
CGCGACATCAAGAGGCGTTC

Downstream 100 bases:

>100_bases
CTCCGCGCAAGGTGAAGACGAAGAAGCCTTCCGCTGTGATGGGCCGCCCCCGCGGGTTCGACCGCGACGAGGCACTCGTG
GAGGCGATGCGGGTGTTTTG

Product: FrdD homolog SocA2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MAWIVLILAGCLEIAWALALKRADGLTRFWPSVIGIGLAMVSLVLLSLALKQLPVGTAYDVWVGMGMCGVAVFGMLFLGE
QVSAPRIFFLVMIGIGVAGLRAIER

Sequences:

>Translated_105_residues
MAWIVLILAGCLEIAWALALKRADGLTRFWPSVIGIGLAMVSLVLLSLALKQLPVGTAYDVWVGMGMCGVAVFGMLFLGE
QVSAPRIFFLVMIGIGVAGLRAIER
>Mature_104_residues
AWIVLILAGCLEIAWALALKRADGLTRFWPSVIGIGLAMVSLVLLSLALKQLPVGTAYDVWVGMGMCGVAVFGMLFLGEQ
VSAPRIFFLVMIGIGVAGLRAIER

Specific function: Quaternary ammonium compound efflux pump. Confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations [H]

COG id: COG2076

COG function: function code P; Membrane transporters of cations and cationic drugs

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small multidrug resistance (SMR) protein family. SugE (TC 2.A.7.1.4) subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082378, Length=101, Percent_Identity=46.5346534653465, Blast_Score=95, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000390 [H]

Pfam domain/function: PF00893 Multi_Drug_Res [H]

EC number: NA

Molecular weight: Translated: 11206; Mature: 11075

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWIVLILAGCLEIAWALALKRADGLTRFWPSVIGIGLAMVSLVLLSLALKQLPVGTAYD
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VWVGMGMCGVAVFGMLFLGEQVSAPRIFFLVMIGIGVAGLRAIER
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AWIVLILAGCLEIAWALALKRADGLTRFWPSVIGIGLAMVSLVLLSLALKQLPVGTAYD
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VWVGMGMCGVAVFGMLFLGEQVSAPRIFFLVMIGIGVAGLRAIER
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA