| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is cinA [C]
Identifier: 108758824
GI number: 108758824
Start: 1695895
End: 1697160
Strand: Direct
Name: cinA [C]
Synonym: MXAN_1438
Alternate gene names: 108758824
Gene position: 1695895-1697160 (Clockwise)
Preceding gene: 108763148
Following gene: 108761144
Centisome position: 18.56
GC content: 70.93
Gene sequence:
>1266_bases ATGCGCGTCGAGCTGCTGTGCACCGGTGACGAGCTCGTCACCGGCCTCATTACGGATACGAACAGCACGTACCTGGAGGC CCGCCTCTTCGACCTTGGCGTCAAGGTGGAGCGCGTGGTCCTGGTGGGTGACGTGCGGCCGGACATCATCCAGTCGCTGA AGGAAGCCGCGTCGCGCGCGGATGTGGTGGTGGTGTCGGGGGGCCTGGGGCCCACGGCGGACGACTTCACCCTCGAATGC GCCGCGGAGGCCGCGGGCGTGCCGCTGGAGGAGGATGCCCAGGTCCTCGACTGGCTGCACCAGCGCTACGCCGCGCGAGG CCTGTCGCCCAACCCGAGCGCCCTGCGCATGGCCCGCGTCCCCCAGGGCTCGGAGCCCGTGAAGAACCCCGAGGGCTCCG CGCCGCTCGTCGTGATGAAGCTGGGTGGCGCCCAGTTGTTCTTCCTTCCGGGGGTGCCCCGTGAGTTCAAGGCGCTCCTG GAAGGCGAGGTGCTGCCGCGGATCCGCGCGACGCTGGACGCCCGCCCCGAGCGCACCTACCGGGCCTTCCGGCTGCTGCG CACGGTGGGCATCCCGGAGTCGGAGCTCGACATTGCGGTTGCTCCCATGGGCCCCCGGCATCCCCGCATCGTGTTCGGCT TCCGCACCCACGCCCCCGAAAACCACCTGAAGCTGATGGCGGAGGCCCCCTCCCAATCGGAAGCGGATGCCGCGCTCGCC GCCGTGGAGGTGGAGTGCCGCCAGATGCTGGGCACGAAGCTCTTCGGTGTGGACTCGGAAGCGTACGCCGCGGTGGTCCT CGAAACGCTTCGTCGGGCGGGCGCCACGCTGGCGGTGGCGGAGAGCTGCACCGGCGGCCTCATCGCCCAGCAGCTCACGG CCGTGCCGGGCTCCAGCGAGGTCTTCATCGGCGGCGCGGTGGTGTACTCGGAGAAGATGAAATCCGCATGGGTGGGCGTT CCTCCCGACGTGCTCGCACGGCACACGGCTGTCTCGCGGGAGACGGCCGAGGCCATGGCGGAGGGCGTGCGCGATGCCTG TGGCACGACCTACGGCCTGTCGGTGACGGGATACGCGGGCCCTGGCGGTGGCACGCCGGAGGACCCCGTTGGCACCGTGT ACTGCGCGCTGTCGGCGCCTGGCGTGCCCACCCGCTGTGAGCGCATCTCTGTCACCGGCGACCGCGACCGCGTGCGCCTG TTCGCCGCTTCCCACACGCTTGAAATGCTGCGGCAGCACCTGCTCGCCGCGCCCGCTACCCCATGA
Upstream 100 bases:
>100_bases CTGTTTCCCGCTCGGCCCCCTTCCAGACCAGGGGGCGTTGCTGCTTGAGTGCGCTTCGGTCCGTGCCCAGCCGTCCGGCT GCCGCTAGGATGCGCGGCCC
Downstream 100 bases:
>100_bases GCCGTTCCAAGTCCAAGCGCCCCCGTCCGCCCTCCTCCGAGCCGGGAGCTTCCGAACCAGCCGCGTCAGGAGCGTCCGCT GTCGCGCCCGTCGCTCCGCA
Product: putative competence/damage-inducible protein CinA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MRVELLCTGDELVTGLITDTNSTYLEARLFDLGVKVERVVLVGDVRPDIIQSLKEAASRADVVVVSGGLGPTADDFTLEC AAEAAGVPLEEDAQVLDWLHQRYAARGLSPNPSALRMARVPQGSEPVKNPEGSAPLVVMKLGGAQLFFLPGVPREFKALL EGEVLPRIRATLDARPERTYRAFRLLRTVGIPESELDIAVAPMGPRHPRIVFGFRTHAPENHLKLMAEAPSQSEADAALA AVEVECRQMLGTKLFGVDSEAYAAVVLETLRRAGATLAVAESCTGGLIAQQLTAVPGSSEVFIGGAVVYSEKMKSAWVGV PPDVLARHTAVSRETAEAMAEGVRDACGTTYGLSVTGYAGPGGGTPEDPVGTVYCALSAPGVPTRCERISVTGDRDRVRL FAASHTLEMLRQHLLAAPATP
Sequences:
>Translated_421_residues MRVELLCTGDELVTGLITDTNSTYLEARLFDLGVKVERVVLVGDVRPDIIQSLKEAASRADVVVVSGGLGPTADDFTLEC AAEAAGVPLEEDAQVLDWLHQRYAARGLSPNPSALRMARVPQGSEPVKNPEGSAPLVVMKLGGAQLFFLPGVPREFKALL EGEVLPRIRATLDARPERTYRAFRLLRTVGIPESELDIAVAPMGPRHPRIVFGFRTHAPENHLKLMAEAPSQSEADAALA AVEVECRQMLGTKLFGVDSEAYAAVVLETLRRAGATLAVAESCTGGLIAQQLTAVPGSSEVFIGGAVVYSEKMKSAWVGV PPDVLARHTAVSRETAEAMAEGVRDACGTTYGLSVTGYAGPGGGTPEDPVGTVYCALSAPGVPTRCERISVTGDRDRVRL FAASHTLEMLRQHLLAAPATP >Mature_421_residues MRVELLCTGDELVTGLITDTNSTYLEARLFDLGVKVERVVLVGDVRPDIIQSLKEAASRADVVVVSGGLGPTADDFTLEC AAEAAGVPLEEDAQVLDWLHQRYAARGLSPNPSALRMARVPQGSEPVKNPEGSAPLVVMKLGGAQLFFLPGVPREFKALL EGEVLPRIRATLDARPERTYRAFRLLRTVGIPESELDIAVAPMGPRHPRIVFGFRTHAPENHLKLMAEAPSQSEADAALA AVEVECRQMLGTKLFGVDSEAYAAVVLETLRRAGATLAVAESCTGGLIAQQLTAVPGSSEVFIGGAVVYSEKMKSAWVGV PPDVLARHTAVSRETAEAMAEGVRDACGTTYGLSVTGYAGPGGGTPEDPVGTVYCALSAPGVPTRCERISVTGDRDRVRL FAASHTLEMLRQHLLAAPATP
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family
Homologues:
Organism=Homo sapiens, GI41872403, Length=161, Percent_Identity=32.2981366459627, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI296434309, Length=161, Percent_Identity=32.2981366459627, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI41872389, Length=161, Percent_Identity=32.2981366459627, Blast_Score=69, Evalue=8e-12, Organism=Escherichia coli, GI1788583, Length=331, Percent_Identity=31.4199395770393, Blast_Score=149, Evalue=4e-37, Organism=Escherichia coli, GI1789052, Length=150, Percent_Identity=41.3333333333333, Blast_Score=106, Evalue=3e-24, Organism=Escherichia coli, GI1787818, Length=105, Percent_Identity=35.2380952380952, Blast_Score=65, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6323832, Length=184, Percent_Identity=29.3478260869565, Blast_Score=91, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CINAL_MYXXD (Q1DCC8)
Other databases:
- EMBL: CP000113 - RefSeq: YP_629695.1 - ProteinModelPortal: Q1DCC8 - SMR: Q1DCC8 - STRING: Q1DCC8 - GeneID: 4101226 - GenomeReviews: CP000113_GR - KEGG: mxa:MXAN_1438 - TIGR: MXAN_1438 - eggNOG: COG1058 - HOGENOM: HBG449871 - OMA: NPTVAPY - PhylomeDB: Q1DCC8 - ProtClustDB: CLSK946768 - BioCyc: MXAN246197:MXAN_1438-MONOMER - HAMAP: MF_00226_B - InterPro: IPR008136 - InterPro: IPR008135 - InterPro: IPR001453 - Gene3D: G3DSA:3.40.980.10 - PIRSF: PIRSF006728 - SMART: SM00852 - TIGRFAMs: TIGR00199 - TIGRFAMs: TIGR00200
Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth; SSF53218 MoCF_biosynth
EC number: NA
Molecular weight: Translated: 44640; Mature: 44640
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVELLCTGDELVTGLITDTNSTYLEARLFDLGVKVERVVLVGDVRPDIIQSLKEAASRA CEEEEEECCHHHEEEEEECCCCCEEEEEHHHCCCEEEEEEEEECCCHHHHHHHHHHHCCC DVVVVSGGLGPTADDFTLECAAEAAGVPLEEDAQVLDWLHQRYAARGLSPNPSALRMARV CEEEEECCCCCCCCCCEEEEHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHEEEEEC PQGSEPVKNPEGSAPLVVMKLGGAQLFFLPGVPREFKALLEGEVLPRIRATLDARPERTY CCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHCCCHHHHHHHHHCCCCHHHH RAFRLLRTVGIPESELDIAVAPMGPRHPRIVFGFRTHAPENHLKLMAEAPSQSEADAALA HHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCHHEEEECCCCCCCHHHHHH AVEVECRQMLGTKLFGVDSEAYAAVVLETLRRAGATLAVAESCTGGLIAQQLTAVPGSSE HHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHCCCEEEEHHHCCCHHHHHHHHCCCCCCC VFIGGAVVYSEKMKSAWVGVPPDVLARHTAVSRETAEAMAEGVRDACGTTYGLSVTGYAG EEEEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECEEEEEECC PGGGTPEDPVGTVYCALSAPGVPTRCERISVTGDRDRVRLFAASHTLEMLRQHLLAAPAT CCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHCCCCC P C >Mature Secondary Structure MRVELLCTGDELVTGLITDTNSTYLEARLFDLGVKVERVVLVGDVRPDIIQSLKEAASRA CEEEEEECCHHHEEEEEECCCCCEEEEEHHHCCCEEEEEEEEECCCHHHHHHHHHHHCCC DVVVVSGGLGPTADDFTLECAAEAAGVPLEEDAQVLDWLHQRYAARGLSPNPSALRMARV CEEEEECCCCCCCCCCEEEEHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHEEEEEC PQGSEPVKNPEGSAPLVVMKLGGAQLFFLPGVPREFKALLEGEVLPRIRATLDARPERTY CCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHCCCHHHHHHHHHCCCCHHHH RAFRLLRTVGIPESELDIAVAPMGPRHPRIVFGFRTHAPENHLKLMAEAPSQSEADAALA HHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCHHEEEECCCCCCCHHHHHH AVEVECRQMLGTKLFGVDSEAYAAVVLETLRRAGATLAVAESCTGGLIAQQLTAVPGSSE HHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHCCCEEEEHHHCCCHHHHHHHHCCCCCCC VFIGGAVVYSEKMKSAWVGVPPDVLARHTAVSRETAEAMAEGVRDACGTTYGLSVTGYAG EEEEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECEEEEEECC PGGGTPEDPVGTVYCALSAPGVPTRCERISVTGDRDRVRLFAASHTLEMLRQHLLAAPAT CCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA