Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is astB

Identifier: 108758786

GI number: 108758786

Start: 1234152

End: 1235474

Strand: Reverse

Name: astB

Synonym: MXAN_1056

Alternate gene names: 108758786

Gene position: 1235474-1234152 (Counterclockwise)

Preceding gene: 108757378

Following gene: 108762618

Centisome position: 13.52

GC content: 71.2

Gene sequence:

>1323_bases
ATGCGCGAATACAACTTCGACGGGCTCGTTGGGCCCACCCACAATTACGGCGGCCTCTCGCCCGGCAACCTGGCATCGCA
GAGCCATGTCGGTGAGCCCAGCCACCCCCGGGACGCGGCCCTCCAGGGGCTGGAAAAGATGCGCTTTGTGTCCGCCCTGG
GGGTGGGACAGGCGGTCCTGCCGCCCCAGCCGCGCCCGTCCCTGCACGCGCTGAGGGCGCTGGGCTTCACGGGCTCGGAC
GAGGAGGTCATCACCCGGGCCGCGCGCGAGGCCGAACACCTGTTGCGCCTGACGTCCAGCGCGTCCTCCATGTGGACGGC
CAACGCGGCCACGGTGGCGCCCAGCGCGGACACGGCGGATGGCCGGGTGCACCTGACACCGGCCAACCTGTCGCAGATGT
ACCACCGGGCCATCGAGGCGGAGACGACGCACTCGGTGCTGCGCGCCATCTTCTCCAATGAGAAGTACTTCGCGGTGCAC
GCGCCGCTGCCGGGCAGCGGGCACTTCGCGGACGAGGGCGCGGCCAACCACACGCGGCTCGCCACGCCCGGGCACGCGGG
CGTCCATCTGCTCGCCTGGGGCCGCAGCGCGTGGCAGGACGTGCAGGGGCCCAGCCGCTTCCCCGCGCGGCAGACGCTGG
AGGCCAGCCAGGCGCTGGCGCGGCTCCACCAGTTGGACGCGAAGTCGGTGCTCTTCCCGCAGCAACACCCCGAGGGCATC
GACGCGGGGGCCTTCCACACGGACGTGCTGGCGGTGGGCAACGAGCGGTTCCTGATGCTGCATGAGCTGGCCTTCGTGGA
CCACGCGGGGCTCCTGGCGGTGCTGCGCGAGAAGCTGGGCCAGGACTTCCGCGCGGTGGTGGCCACGAAGGCGGAGCTGC
CGGCGAAGGACGCGGTGAAGGCGTACCCGTTCAACTCGCAGGTGCTGACGCTGCCGGACGGCACCATGGCGATTGTGGCG
CCGATAGAGAGCCGGGAGACGCCCGCGGCGCGGCAGTTCCTGGAGCGCGTGGTGGCCGAGGACACGCCGGTGAAGGCCGT
GCACTACCTGGACGTGCGCCAGTCGATGAACAACGGCGGCGGACCGGCCTGCCTGCGCCAGCGGGTGTGGCTCACGGACG
AGGAGCGCGGGGCCATCAAGGCAGACGTCTTCTACACGCCCGCGCTGCATGACTCGCTGGCCGGCTGGGTGCGGCGGCAC
TACCGCGAGGTGCTGCGGCCCAAGGACCTGCAGGACCCGCAGCTGGCGCGGGAGACGATGACGGCGCTGGATGAGCTGAC
CCGGATTCTCAACCTGGGCAGCGTCTACGACTTCCAACGCTGA

Upstream 100 bases:

>100_bases
GGTTGAAGGAGCAACAGGACGCCACGGATGAGCACGTAGCGGAGGAAACGCTTGAGGCGCTTTGCTAAGGGTGGACGCTC
CACGAGGCGTTCAATATCCC

Downstream 100 bases:

>100_bases
GGCGTACAACGGCCGCTGAGCTTCCGGCTCAGCGCGCGTCCAGGGGCTGGAAGGTGACGCCCTCCAGCTTCAGCCGGTCT
GCCGCGACCACCATGCGTTC

Product: succinylarginine dihydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MREYNFDGLVGPTHNYGGLSPGNLASQSHVGEPSHPRDAALQGLEKMRFVSALGVGQAVLPPQPRPSLHALRALGFTGSD
EEVITRAAREAEHLLRLTSSASSMWTANAATVAPSADTADGRVHLTPANLSQMYHRAIEAETTHSVLRAIFSNEKYFAVH
APLPGSGHFADEGAANHTRLATPGHAGVHLLAWGRSAWQDVQGPSRFPARQTLEASQALARLHQLDAKSVLFPQQHPEGI
DAGAFHTDVLAVGNERFLMLHELAFVDHAGLLAVLREKLGQDFRAVVATKAELPAKDAVKAYPFNSQVLTLPDGTMAIVA
PIESRETPAARQFLERVVAEDTPVKAVHYLDVRQSMNNGGGPACLRQRVWLTDEERGAIKADVFYTPALHDSLAGWVRRH
YREVLRPKDLQDPQLARETMTALDELTRILNLGSVYDFQR

Sequences:

>Translated_440_residues
MREYNFDGLVGPTHNYGGLSPGNLASQSHVGEPSHPRDAALQGLEKMRFVSALGVGQAVLPPQPRPSLHALRALGFTGSD
EEVITRAAREAEHLLRLTSSASSMWTANAATVAPSADTADGRVHLTPANLSQMYHRAIEAETTHSVLRAIFSNEKYFAVH
APLPGSGHFADEGAANHTRLATPGHAGVHLLAWGRSAWQDVQGPSRFPARQTLEASQALARLHQLDAKSVLFPQQHPEGI
DAGAFHTDVLAVGNERFLMLHELAFVDHAGLLAVLREKLGQDFRAVVATKAELPAKDAVKAYPFNSQVLTLPDGTMAIVA
PIESRETPAARQFLERVVAEDTPVKAVHYLDVRQSMNNGGGPACLRQRVWLTDEERGAIKADVFYTPALHDSLAGWVRRH
YREVLRPKDLQDPQLARETMTALDELTRILNLGSVYDFQR
>Mature_440_residues
MREYNFDGLVGPTHNYGGLSPGNLASQSHVGEPSHPRDAALQGLEKMRFVSALGVGQAVLPPQPRPSLHALRALGFTGSD
EEVITRAAREAEHLLRLTSSASSMWTANAATVAPSADTADGRVHLTPANLSQMYHRAIEAETTHSVLRAIFSNEKYFAVH
APLPGSGHFADEGAANHTRLATPGHAGVHLLAWGRSAWQDVQGPSRFPARQTLEASQALARLHQLDAKSVLFPQQHPEGI
DAGAFHTDVLAVGNERFLMLHELAFVDHAGLLAVLREKLGQDFRAVVATKAELPAKDAVKAYPFNSQVLTLPDGTMAIVA
PIESRETPAARQFLERVVAEDTPVKAVHYLDVRQSMNNGGGPACLRQRVWLTDEERGAIKADVFYTPALHDSLAGWVRRH
YREVLRPKDLQDPQLARETMTALDELTRILNLGSVYDFQR

Specific function: Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2)

COG id: COG3724

COG function: function code E; Succinylarginine dihydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the succinylarginine dihydrolase family

Homologues:

Organism=Escherichia coli, GI1788041, Length=439, Percent_Identity=50.7972665148064, Blast_Score=424, Evalue=1e-120,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ASTB_MYXXD (Q1DDF6)

Other databases:

- EMBL:   CP000113
- RefSeq:   YP_629317.1
- ProteinModelPortal:   Q1DDF6
- SMR:   Q1DDF6
- STRING:   Q1DDF6
- GeneID:   4100895
- GenomeReviews:   CP000113_GR
- KEGG:   mxa:MXAN_1056
- TIGR:   MXAN_1056
- eggNOG:   COG3724
- HOGENOM:   HBG289862
- OMA:   HFAHHPA
- PhylomeDB:   Q1DDF6
- ProtClustDB:   PRK13281
- HAMAP:   MF_01172
- InterPro:   IPR007079
- Gene3D:   G3DSA:3.75.10.20
- TIGRFAMs:   TIGR03241

Pfam domain/function: PF04996 AstB

EC number: =3.5.3.23

Molecular weight: Translated: 48059; Mature: 48059

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: ACT_SITE 172-172 ACT_SITE 246-246 ACT_SITE 364-364 BINDING 108-108 BINDING 210-210 BINDING 248-248 BINDING 358-358

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREYNFDGLVGPTHNYGGLSPGNLASQSHVGEPSHPRDAALQGLEKMRFVSALGVGQAVL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
PPQPRPSLHALRALGFTGSDEEVITRAAREAEHLLRLTSSASSMWTANAATVAPSADTAD
CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEECCCEEECCCCCCCC
GRVHLTPANLSQMYHRAIEAETTHSVLRAIFSNEKYFAVHAPLPGSGHFADEGAANHTRL
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEE
ATPGHAGVHLLAWGRSAWQDVQGPSRFPARQTLEASQALARLHQLDAKSVLFPQQHPEGI
CCCCCCCEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC
DAGAFHTDVLAVGNERFLMLHELAFVDHAGLLAVLREKLGQDFRAVVATKAELPAKDAVK
CCCCHHHHHEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCCE
AYPFNSQVLTLPDGTMAIVAPIESRETPAARQFLERVVAEDTPVKAVHYLDVRQSMNNGG
ECCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
GPACLRQRVWLTDEERGAIKADVFYTPALHDSLAGWVRRHYREVLRPKDLQDPQLARETM
CHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
TALDELTRILNLGSVYDFQR
HHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MREYNFDGLVGPTHNYGGLSPGNLASQSHVGEPSHPRDAALQGLEKMRFVSALGVGQAVL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
PPQPRPSLHALRALGFTGSDEEVITRAAREAEHLLRLTSSASSMWTANAATVAPSADTAD
CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEECCCEEECCCCCCCC
GRVHLTPANLSQMYHRAIEAETTHSVLRAIFSNEKYFAVHAPLPGSGHFADEGAANHTRL
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEE
ATPGHAGVHLLAWGRSAWQDVQGPSRFPARQTLEASQALARLHQLDAKSVLFPQQHPEGI
CCCCCCCEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC
DAGAFHTDVLAVGNERFLMLHELAFVDHAGLLAVLREKLGQDFRAVVATKAELPAKDAVK
CCCCHHHHHEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCCE
AYPFNSQVLTLPDGTMAIVAPIESRETPAARQFLERVVAEDTPVKAVHYLDVRQSMNNGG
ECCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
GPACLRQRVWLTDEERGAIKADVFYTPALHDSLAGWVRRHYREVLRPKDLQDPQLARETM
CHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
TALDELTRILNLGSVYDFQR
HHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA