| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is astB
Identifier: 108758786
GI number: 108758786
Start: 1234152
End: 1235474
Strand: Reverse
Name: astB
Synonym: MXAN_1056
Alternate gene names: 108758786
Gene position: 1235474-1234152 (Counterclockwise)
Preceding gene: 108757378
Following gene: 108762618
Centisome position: 13.52
GC content: 71.2
Gene sequence:
>1323_bases ATGCGCGAATACAACTTCGACGGGCTCGTTGGGCCCACCCACAATTACGGCGGCCTCTCGCCCGGCAACCTGGCATCGCA GAGCCATGTCGGTGAGCCCAGCCACCCCCGGGACGCGGCCCTCCAGGGGCTGGAAAAGATGCGCTTTGTGTCCGCCCTGG GGGTGGGACAGGCGGTCCTGCCGCCCCAGCCGCGCCCGTCCCTGCACGCGCTGAGGGCGCTGGGCTTCACGGGCTCGGAC GAGGAGGTCATCACCCGGGCCGCGCGCGAGGCCGAACACCTGTTGCGCCTGACGTCCAGCGCGTCCTCCATGTGGACGGC CAACGCGGCCACGGTGGCGCCCAGCGCGGACACGGCGGATGGCCGGGTGCACCTGACACCGGCCAACCTGTCGCAGATGT ACCACCGGGCCATCGAGGCGGAGACGACGCACTCGGTGCTGCGCGCCATCTTCTCCAATGAGAAGTACTTCGCGGTGCAC GCGCCGCTGCCGGGCAGCGGGCACTTCGCGGACGAGGGCGCGGCCAACCACACGCGGCTCGCCACGCCCGGGCACGCGGG CGTCCATCTGCTCGCCTGGGGCCGCAGCGCGTGGCAGGACGTGCAGGGGCCCAGCCGCTTCCCCGCGCGGCAGACGCTGG AGGCCAGCCAGGCGCTGGCGCGGCTCCACCAGTTGGACGCGAAGTCGGTGCTCTTCCCGCAGCAACACCCCGAGGGCATC GACGCGGGGGCCTTCCACACGGACGTGCTGGCGGTGGGCAACGAGCGGTTCCTGATGCTGCATGAGCTGGCCTTCGTGGA CCACGCGGGGCTCCTGGCGGTGCTGCGCGAGAAGCTGGGCCAGGACTTCCGCGCGGTGGTGGCCACGAAGGCGGAGCTGC CGGCGAAGGACGCGGTGAAGGCGTACCCGTTCAACTCGCAGGTGCTGACGCTGCCGGACGGCACCATGGCGATTGTGGCG CCGATAGAGAGCCGGGAGACGCCCGCGGCGCGGCAGTTCCTGGAGCGCGTGGTGGCCGAGGACACGCCGGTGAAGGCCGT GCACTACCTGGACGTGCGCCAGTCGATGAACAACGGCGGCGGACCGGCCTGCCTGCGCCAGCGGGTGTGGCTCACGGACG AGGAGCGCGGGGCCATCAAGGCAGACGTCTTCTACACGCCCGCGCTGCATGACTCGCTGGCCGGCTGGGTGCGGCGGCAC TACCGCGAGGTGCTGCGGCCCAAGGACCTGCAGGACCCGCAGCTGGCGCGGGAGACGATGACGGCGCTGGATGAGCTGAC CCGGATTCTCAACCTGGGCAGCGTCTACGACTTCCAACGCTGA
Upstream 100 bases:
>100_bases GGTTGAAGGAGCAACAGGACGCCACGGATGAGCACGTAGCGGAGGAAACGCTTGAGGCGCTTTGCTAAGGGTGGACGCTC CACGAGGCGTTCAATATCCC
Downstream 100 bases:
>100_bases GGCGTACAACGGCCGCTGAGCTTCCGGCTCAGCGCGCGTCCAGGGGCTGGAAGGTGACGCCCTCCAGCTTCAGCCGGTCT GCCGCGACCACCATGCGTTC
Product: succinylarginine dihydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MREYNFDGLVGPTHNYGGLSPGNLASQSHVGEPSHPRDAALQGLEKMRFVSALGVGQAVLPPQPRPSLHALRALGFTGSD EEVITRAAREAEHLLRLTSSASSMWTANAATVAPSADTADGRVHLTPANLSQMYHRAIEAETTHSVLRAIFSNEKYFAVH APLPGSGHFADEGAANHTRLATPGHAGVHLLAWGRSAWQDVQGPSRFPARQTLEASQALARLHQLDAKSVLFPQQHPEGI DAGAFHTDVLAVGNERFLMLHELAFVDHAGLLAVLREKLGQDFRAVVATKAELPAKDAVKAYPFNSQVLTLPDGTMAIVA PIESRETPAARQFLERVVAEDTPVKAVHYLDVRQSMNNGGGPACLRQRVWLTDEERGAIKADVFYTPALHDSLAGWVRRH YREVLRPKDLQDPQLARETMTALDELTRILNLGSVYDFQR
Sequences:
>Translated_440_residues MREYNFDGLVGPTHNYGGLSPGNLASQSHVGEPSHPRDAALQGLEKMRFVSALGVGQAVLPPQPRPSLHALRALGFTGSD EEVITRAAREAEHLLRLTSSASSMWTANAATVAPSADTADGRVHLTPANLSQMYHRAIEAETTHSVLRAIFSNEKYFAVH APLPGSGHFADEGAANHTRLATPGHAGVHLLAWGRSAWQDVQGPSRFPARQTLEASQALARLHQLDAKSVLFPQQHPEGI DAGAFHTDVLAVGNERFLMLHELAFVDHAGLLAVLREKLGQDFRAVVATKAELPAKDAVKAYPFNSQVLTLPDGTMAIVA PIESRETPAARQFLERVVAEDTPVKAVHYLDVRQSMNNGGGPACLRQRVWLTDEERGAIKADVFYTPALHDSLAGWVRRH YREVLRPKDLQDPQLARETMTALDELTRILNLGSVYDFQR >Mature_440_residues MREYNFDGLVGPTHNYGGLSPGNLASQSHVGEPSHPRDAALQGLEKMRFVSALGVGQAVLPPQPRPSLHALRALGFTGSD EEVITRAAREAEHLLRLTSSASSMWTANAATVAPSADTADGRVHLTPANLSQMYHRAIEAETTHSVLRAIFSNEKYFAVH APLPGSGHFADEGAANHTRLATPGHAGVHLLAWGRSAWQDVQGPSRFPARQTLEASQALARLHQLDAKSVLFPQQHPEGI DAGAFHTDVLAVGNERFLMLHELAFVDHAGLLAVLREKLGQDFRAVVATKAELPAKDAVKAYPFNSQVLTLPDGTMAIVA PIESRETPAARQFLERVVAEDTPVKAVHYLDVRQSMNNGGGPACLRQRVWLTDEERGAIKADVFYTPALHDSLAGWVRRH YREVLRPKDLQDPQLARETMTALDELTRILNLGSVYDFQR
Specific function: Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2)
COG id: COG3724
COG function: function code E; Succinylarginine dihydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the succinylarginine dihydrolase family
Homologues:
Organism=Escherichia coli, GI1788041, Length=439, Percent_Identity=50.7972665148064, Blast_Score=424, Evalue=1e-120,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ASTB_MYXXD (Q1DDF6)
Other databases:
- EMBL: CP000113 - RefSeq: YP_629317.1 - ProteinModelPortal: Q1DDF6 - SMR: Q1DDF6 - STRING: Q1DDF6 - GeneID: 4100895 - GenomeReviews: CP000113_GR - KEGG: mxa:MXAN_1056 - TIGR: MXAN_1056 - eggNOG: COG3724 - HOGENOM: HBG289862 - OMA: HFAHHPA - PhylomeDB: Q1DDF6 - ProtClustDB: PRK13281 - HAMAP: MF_01172 - InterPro: IPR007079 - Gene3D: G3DSA:3.75.10.20 - TIGRFAMs: TIGR03241
Pfam domain/function: PF04996 AstB
EC number: =3.5.3.23
Molecular weight: Translated: 48059; Mature: 48059
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: ACT_SITE 172-172 ACT_SITE 246-246 ACT_SITE 364-364 BINDING 108-108 BINDING 210-210 BINDING 248-248 BINDING 358-358
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREYNFDGLVGPTHNYGGLSPGNLASQSHVGEPSHPRDAALQGLEKMRFVSALGVGQAVL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC PPQPRPSLHALRALGFTGSDEEVITRAAREAEHLLRLTSSASSMWTANAATVAPSADTAD CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEECCCEEECCCCCCCC GRVHLTPANLSQMYHRAIEAETTHSVLRAIFSNEKYFAVHAPLPGSGHFADEGAANHTRL CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEE ATPGHAGVHLLAWGRSAWQDVQGPSRFPARQTLEASQALARLHQLDAKSVLFPQQHPEGI CCCCCCCEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC DAGAFHTDVLAVGNERFLMLHELAFVDHAGLLAVLREKLGQDFRAVVATKAELPAKDAVK CCCCHHHHHEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCCE AYPFNSQVLTLPDGTMAIVAPIESRETPAARQFLERVVAEDTPVKAVHYLDVRQSMNNGG ECCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC GPACLRQRVWLTDEERGAIKADVFYTPALHDSLAGWVRRHYREVLRPKDLQDPQLARETM CHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH TALDELTRILNLGSVYDFQR HHHHHHHHHHHCCCHHCCCC >Mature Secondary Structure MREYNFDGLVGPTHNYGGLSPGNLASQSHVGEPSHPRDAALQGLEKMRFVSALGVGQAVL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC PPQPRPSLHALRALGFTGSDEEVITRAAREAEHLLRLTSSASSMWTANAATVAPSADTAD CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEECCCEEECCCCCCCC GRVHLTPANLSQMYHRAIEAETTHSVLRAIFSNEKYFAVHAPLPGSGHFADEGAANHTRL CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEE ATPGHAGVHLLAWGRSAWQDVQGPSRFPARQTLEASQALARLHQLDAKSVLFPQQHPEGI CCCCCCCEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC DAGAFHTDVLAVGNERFLMLHELAFVDHAGLLAVLREKLGQDFRAVVATKAELPAKDAVK CCCCHHHHHEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCCE AYPFNSQVLTLPDGTMAIVAPIESRETPAARQFLERVVAEDTPVKAVHYLDVRQSMNNGG ECCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC GPACLRQRVWLTDEERGAIKADVFYTPALHDSLAGWVRRHYREVLRPKDLQDPQLARETM CHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH TALDELTRILNLGSVYDFQR HHHHHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA