Click here to switch to the map view.

The map label for this gene is rnr [H]

Identifier: 108758783

GI number: 108758783

Start: 5165879

End: 5169427

Strand: Reverse

Name: rnr [H]

Synonym: MXAN_4210

Alternate gene names: 108758783

Gene position: 5169427-5165879 (Counterclockwise)

Preceding gene: 108762555

Following gene: 108759531

Centisome position: 56.56

GC content: 71.77

Gene sequence:

>3549_bases
GTGAGCCTTTCTCAAGACCTTCTCAAGCAGATCCTCGCTGAAGCAGACCACCCGCTGGGCATCAAGGAGCTTCTCCGGCT
CGCGGGCCTGCACCCCGGACAACAGACGGAGCTCAAGCGCGCCCTGCGCGAGCTCGTCCGTCAGGGCGACATCCTCAAGG
ACGGCAAGCGCTTCGTGCCCCGGCAGCCATCGCGGCGCGAGGCCGACGTGCGTGCAAGGGAGCAGGGCGCTCCCATGGCG
TGGCGTCAGCGCGACGCCGCCGGGCCCCGCGAGGGCGGGCCGGACCGCGGACCTCGGCATGCCGGGCAGCGCGCGGCGGG
CCCTGGTGGCTTCGCGGCCCGCCGGCATGAGCCGGGGGCGCGCGGCAAGAGCGCGGGCTGGCAGGAGCGGGGCCCAGGGC
GTGAGCGCCGGGGCGCTTCGAAGCATGGAGGGGGCTTCCGGCAGGAGCGGGCGGAGTGGCCCGGCCGCCGGGGCCGTTTC
AGCGAGGTCGAAGAGGATGGCCTGCTAGAAGGCATCCTCCACGTCCACCGGGATGGCTTCGGCTTCGTGCATCCGCTGTC
GGGGGAAGGGGACAACGTCTTCCTGCCGCCGCACGAGGCCCAGCGCGCGCTCGACAATGACCGGGTGGTGGTGGCCGTCT
CGGGGCGGCCTCCTCGCCTGGAGGGCCGGATCGTCCGGGTGGTGCAGCGCCGTCGCGAGCTGGCGGTGGGCACCTACGTC
GTGAAGGGCCGCTACGCCGTGGTGTACCCCACGGATTCGAGCTTGCCCGGCCCCATCCGTGTGCCGCTGACGCAGATGGC
GCGCGAAGGGGACCTGGTGAAGGTCCAACTGGGCATTGGTGCCCAGATGCTGGACCCGGACCGGGGGCTGCACGGCGAGG
TCGCCGGCTCCCTGGGCAAGCCCGGCACTCCGAGCGCCGAGGTATTGGGCGTTGCCTACTCGCAGGGGTTCTCCGACGAG
TTCCCGCCGGAGGTCATGGCCGAGGCGGACCGCTACGCGGTGACGGTGACCGAGGAAGAGGTCCGCGGCGAGCACCGGCG
CGATCTGCGCGCCATTCCCCTCATCACCATCGATGGTGAGGACGCGCGCGACTTCGACGACGCTGTCTGCGTGGAGGACC
GGGCGGATGGGTGGCGGTTGGTGGTGGCCATCGCGGACGTGACGCACTACGTGTGGGAAGGCAGTGCGCTCAACGCGGAG
GCGCTGCGTCGCGCCACGTCCGTGTACCTGCCGGACCGGGTGCTGCCCATGCTGCCGGAGCGGCTGAGCAACGGCATCTG
CTCTCTACGCCCGGACGAGGACCGGCTGTGCATGGTGGCGGACATGACGTTCGACCGCCGGGGCCACCGTCGCTCCTACG
ACTTGTATCCGGCGGTGATGCGCAGCGTGGCGCGGTGCACGTACAACGAGGTGCAGGACGTCCTCGACGGCAAGGACGTG
CCGCACCGCAACGCACACAAGCCCCACTTCGAGCGGCTGATGTCGCTGGCCCGCGCGCTGATGAAGATGCGCAAGGAGCG
CGGCGCCATCGACTTCGACCTGCCCGAGCACAAGGTGGTGCTGGACGAGGACGGCCTGCCCGCGCGCATGGACAAGCGCG
AGCGCAAGGACAGCCACCGCCTCATCGAGGAGTGCATGCTCGCCGCCAACGAGGCGGTGGCGACCTTCTTCCAGAACGAG
GGCCTGCCCACGGTGTACCGGTTCCACGGCGAGCCGGACCCGGAGAAGCTGGCCACGTTCGCCGCGCTGGCGGAGGCCTA
CGGCTTCAAGATGCGCGTCGAGGACGGCGTGTCGTCGAAGGAACTGGATGCCTTCGTCAGCCAGCTCCAAGGCCACCCGG
AGCAGCGGGCGCTGAACCAGCTCCTGCTGCGCTCCATGATGCAGGCCGTGTACACGTCGTCCCGCGTGGGCCACTACGGC
CTGGCCGCCGAGCACTACCTGCACTTCACGTCACCCATCCGCCGCTACCCGGACCTGCTGGTGCACCGGCTGCTCAAGGC
GCACTGGGCCCGGAAGGGGCGCAAGCCTTCGCAGTCGATGCTGGAGCGCGAGGAGGACCAGCTCGAGGACATGGCCGCTC
AGTGCTCCGAACGTGAGCGCGCGGCGATGCAGGTCGAGCGGGAGGTGGTGTCCTTCTACGCGTGCCTGCTGATGAAGGAC
CGCGTGGGCGAGGAGTTCGCCGCCACCGTGGCGGCCATCACCGACTTCGGCTTCTTCGTCGAACTGGACGAGGTGCACGT
CGAAGGCCTGGTGAAGGCCGAGACGCTGGGGCCCGGGGCGAAGCTGGACAAGCTGACGCACTCCCTGGTGTACGCGAATG
GCCGCCGGGTGCGCGTGGGACAGAAGCTGCGGGTGCGGCTGACGTCCGTGAACGTGACGGCGAAGAAGATCGACTTCGAG
GCGCTCCAGTTCGACGGCGAGGCGCCGCTGAGCCGTGTCGCGACGCGGGGCGAGCAGCCGCAGCGGCGTCAGGCATGGAC
GGCCGAGGCGCCGTCGCACCGCGAGCGGGATGGCCGGCGGGAGCGGGCAGGGCGTCCGGGCCGCCGCGAACGGGAAGCCG
CCGCCGCGAGCCGGGGCGCGCCCTCCGGGCAATACGAGGAGACGGGGCCGGGCCGCCCGCGCGGACGCTTCTCCCGCGAG
GGCCGTCGTGAGGAGTCCGCGCCGCACCGGAAGGAGCCTCGGTTCCCGCCCAGGGCGCCAGAAGGACAGGAACCTCCTCG
TGCCGAGTCGCCCGCGTGGCCCAAGCGCAGGACGTTCATCCGCCCGGAGCGGCAGGCACCGGCGCCCGTGTCCGCTGAAA
CGGCCGAGCCGCTTCCGCCCGAAGCGCCGTCCGCGCCCGCTCCATGGGAATTGCCGGCGGGCGAAGACGCCTCCCGGTCT
CCACACCCGGGTTTCGACCGGATTCGCGCGTTGGCGTCCCAGCGTCAGCGTGGGCCTGAACCCCGCGGTCCTTCTCACGG
CCGGTCGTTCCAGAAGCCGAAGCCGCAGGGCGGCCCAGGGCCCCGGTTCCCCGCGCCCAAGCCCGGGCGCGAGTCCGAGG
ACGACAGGGCATTCTCGATGGAGCCCCCGCGCCCGCCGCCCGAGGCGCCCGTTGAAGCGCCCCCACCTGTTCCCAGCCGG
GCCGTGACGGAAACCCCGATTCCCGTGGCCCCGGAGCCCGTGCGAGCCGAGCCCGTGCGAGCCGAGCCCGTGAGCGTCGA
GCCGCCCGTGACTCCCGCACCCGAGGCAGAGGCGGCTGCGCCCAAGCGGAAGGCGGCGCGGAAGAAGGCCGTGGCGAAGG
CAACGCGCACCCCGGCGCGGAAGAAGACCGTCGCGGCTGGCAGCGCCAGGCAGGCGGCCGCCACGAAGGCCAAGAAGCCC
ACCGCCAAGGCGAAGAAGGCTGCGCCTGCTCGGGCCGCCGCGAAGGCCACCAAGGTGGCCGCGACGAAGTCCAAGGCGAA
GGCGCCGTCGAAGAAGGCCGCGAAGCCCGCCGTGGCGCGTGCCGCGAAGCCAGCGAAGGCTTCGGGAGCCGCGAAGAAGA
AGGCGCCTTCGGGGCGAAAGAAGCGCTGA

Upstream 100 bases:

>100_bases
CGCCCGGAGCAGGTTCCGGGGGGCGGCCGGTCGCCGGGGGGTTCCCGTCCGGCCGCTTCGGGCTTACCCGTTCCCGTAGC
GGCCGAGCCGCGACCCCACC

Downstream 100 bases:

>100_bases
GACCGATGCGGGCCTCCTACTTCAAGGGAGGCCCGTGACTTCAGGAGGCAACGTGAGCTTCGTCCGGCTGCTGGGTGTCA
TGCTCGCCATCGCGGGCGCC

Product: ribonuclease R

Products: NA

Alternate protein names: RNase R; VacB protein homolog [H]

Number of amino acids: Translated: 1182; Mature: 1181

Protein sequence:

>1182_residues
MSLSQDLLKQILAEADHPLGIKELLRLAGLHPGQQTELKRALRELVRQGDILKDGKRFVPRQPSRREADVRAREQGAPMA
WRQRDAAGPREGGPDRGPRHAGQRAAGPGGFAARRHEPGARGKSAGWQERGPGRERRGASKHGGGFRQERAEWPGRRGRF
SEVEEDGLLEGILHVHRDGFGFVHPLSGEGDNVFLPPHEAQRALDNDRVVVAVSGRPPRLEGRIVRVVQRRRELAVGTYV
VKGRYAVVYPTDSSLPGPIRVPLTQMAREGDLVKVQLGIGAQMLDPDRGLHGEVAGSLGKPGTPSAEVLGVAYSQGFSDE
FPPEVMAEADRYAVTVTEEEVRGEHRRDLRAIPLITIDGEDARDFDDAVCVEDRADGWRLVVAIADVTHYVWEGSALNAE
ALRRATSVYLPDRVLPMLPERLSNGICSLRPDEDRLCMVADMTFDRRGHRRSYDLYPAVMRSVARCTYNEVQDVLDGKDV
PHRNAHKPHFERLMSLARALMKMRKERGAIDFDLPEHKVVLDEDGLPARMDKRERKDSHRLIEECMLAANEAVATFFQNE
GLPTVYRFHGEPDPEKLATFAALAEAYGFKMRVEDGVSSKELDAFVSQLQGHPEQRALNQLLLRSMMQAVYTSSRVGHYG
LAAEHYLHFTSPIRRYPDLLVHRLLKAHWARKGRKPSQSMLEREEDQLEDMAAQCSERERAAMQVEREVVSFYACLLMKD
RVGEEFAATVAAITDFGFFVELDEVHVEGLVKAETLGPGAKLDKLTHSLVYANGRRVRVGQKLRVRLTSVNVTAKKIDFE
ALQFDGEAPLSRVATRGEQPQRRQAWTAEAPSHRERDGRRERAGRPGRREREAAAASRGAPSGQYEETGPGRPRGRFSRE
GRREESAPHRKEPRFPPRAPEGQEPPRAESPAWPKRRTFIRPERQAPAPVSAETAEPLPPEAPSAPAPWELPAGEDASRS
PHPGFDRIRALASQRQRGPEPRGPSHGRSFQKPKPQGGPGPRFPAPKPGRESEDDRAFSMEPPRPPPEAPVEAPPPVPSR
AVTETPIPVAPEPVRAEPVRAEPVSVEPPVTPAPEAEAAAPKRKAARKKAVAKATRTPARKKTVAAGSARQAAATKAKKP
TAKAKKAAPARAAAKATKVAATKSKAKAPSKKAAKPAVARAAKPAKASGAAKKKAPSGRKKR

Sequences:

>Translated_1182_residues
MSLSQDLLKQILAEADHPLGIKELLRLAGLHPGQQTELKRALRELVRQGDILKDGKRFVPRQPSRREADVRAREQGAPMA
WRQRDAAGPREGGPDRGPRHAGQRAAGPGGFAARRHEPGARGKSAGWQERGPGRERRGASKHGGGFRQERAEWPGRRGRF
SEVEEDGLLEGILHVHRDGFGFVHPLSGEGDNVFLPPHEAQRALDNDRVVVAVSGRPPRLEGRIVRVVQRRRELAVGTYV
VKGRYAVVYPTDSSLPGPIRVPLTQMAREGDLVKVQLGIGAQMLDPDRGLHGEVAGSLGKPGTPSAEVLGVAYSQGFSDE
FPPEVMAEADRYAVTVTEEEVRGEHRRDLRAIPLITIDGEDARDFDDAVCVEDRADGWRLVVAIADVTHYVWEGSALNAE
ALRRATSVYLPDRVLPMLPERLSNGICSLRPDEDRLCMVADMTFDRRGHRRSYDLYPAVMRSVARCTYNEVQDVLDGKDV
PHRNAHKPHFERLMSLARALMKMRKERGAIDFDLPEHKVVLDEDGLPARMDKRERKDSHRLIEECMLAANEAVATFFQNE
GLPTVYRFHGEPDPEKLATFAALAEAYGFKMRVEDGVSSKELDAFVSQLQGHPEQRALNQLLLRSMMQAVYTSSRVGHYG
LAAEHYLHFTSPIRRYPDLLVHRLLKAHWARKGRKPSQSMLEREEDQLEDMAAQCSERERAAMQVEREVVSFYACLLMKD
RVGEEFAATVAAITDFGFFVELDEVHVEGLVKAETLGPGAKLDKLTHSLVYANGRRVRVGQKLRVRLTSVNVTAKKIDFE
ALQFDGEAPLSRVATRGEQPQRRQAWTAEAPSHRERDGRRERAGRPGRREREAAAASRGAPSGQYEETGPGRPRGRFSRE
GRREESAPHRKEPRFPPRAPEGQEPPRAESPAWPKRRTFIRPERQAPAPVSAETAEPLPPEAPSAPAPWELPAGEDASRS
PHPGFDRIRALASQRQRGPEPRGPSHGRSFQKPKPQGGPGPRFPAPKPGRESEDDRAFSMEPPRPPPEAPVEAPPPVPSR
AVTETPIPVAPEPVRAEPVRAEPVSVEPPVTPAPEAEAAAPKRKAARKKAVAKATRTPARKKTVAAGSARQAAATKAKKP
TAKAKKAAPARAAAKATKVAATKSKAKAPSKKAAKPAVARAAKPAKASGAAKKKAPSGRKKR
>Mature_1181_residues
SLSQDLLKQILAEADHPLGIKELLRLAGLHPGQQTELKRALRELVRQGDILKDGKRFVPRQPSRREADVRAREQGAPMAW
RQRDAAGPREGGPDRGPRHAGQRAAGPGGFAARRHEPGARGKSAGWQERGPGRERRGASKHGGGFRQERAEWPGRRGRFS
EVEEDGLLEGILHVHRDGFGFVHPLSGEGDNVFLPPHEAQRALDNDRVVVAVSGRPPRLEGRIVRVVQRRRELAVGTYVV
KGRYAVVYPTDSSLPGPIRVPLTQMAREGDLVKVQLGIGAQMLDPDRGLHGEVAGSLGKPGTPSAEVLGVAYSQGFSDEF
PPEVMAEADRYAVTVTEEEVRGEHRRDLRAIPLITIDGEDARDFDDAVCVEDRADGWRLVVAIADVTHYVWEGSALNAEA
LRRATSVYLPDRVLPMLPERLSNGICSLRPDEDRLCMVADMTFDRRGHRRSYDLYPAVMRSVARCTYNEVQDVLDGKDVP
HRNAHKPHFERLMSLARALMKMRKERGAIDFDLPEHKVVLDEDGLPARMDKRERKDSHRLIEECMLAANEAVATFFQNEG
LPTVYRFHGEPDPEKLATFAALAEAYGFKMRVEDGVSSKELDAFVSQLQGHPEQRALNQLLLRSMMQAVYTSSRVGHYGL
AAEHYLHFTSPIRRYPDLLVHRLLKAHWARKGRKPSQSMLEREEDQLEDMAAQCSERERAAMQVEREVVSFYACLLMKDR
VGEEFAATVAAITDFGFFVELDEVHVEGLVKAETLGPGAKLDKLTHSLVYANGRRVRVGQKLRVRLTSVNVTAKKIDFEA
LQFDGEAPLSRVATRGEQPQRRQAWTAEAPSHRERDGRRERAGRPGRREREAAAASRGAPSGQYEETGPGRPRGRFSREG
RREESAPHRKEPRFPPRAPEGQEPPRAESPAWPKRRTFIRPERQAPAPVSAETAEPLPPEAPSAPAPWELPAGEDASRSP
HPGFDRIRALASQRQRGPEPRGPSHGRSFQKPKPQGGPGPRFPAPKPGRESEDDRAFSMEPPRPPPEAPVEAPPPVPSRA
VTETPIPVAPEPVRAEPVRAEPVSVEPPVTPAPEAEAAAPKRKAARKKAVAKATRTPARKKTVAAGSARQAAATKAKKPT
AKAKKAAPARAAAKATKVAATKSKAKAPSKKAAKPAVARAAKPAKASGAAKKKAPSGRKKR

Specific function: 3'-5'exoribonuclease that participates in an essential cell function. Acts nonspecifically on poly(A), poly(U) and ribosomal RNAs [H]

COG id: COG0557

COG function: function code K; Exoribonuclease R

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI134288890, Length=535, Percent_Identity=31.214953271028, Blast_Score=175, Evalue=2e-43,
Organism=Homo sapiens, GI190014625, Length=502, Percent_Identity=29.8804780876494, Blast_Score=172, Evalue=2e-42,
Organism=Homo sapiens, GI190014623, Length=502, Percent_Identity=29.8804780876494, Blast_Score=171, Evalue=4e-42,
Organism=Homo sapiens, GI19115966, Length=407, Percent_Identity=30.7125307125307, Blast_Score=144, Evalue=4e-34,
Organism=Homo sapiens, GI219521928, Length=407, Percent_Identity=30.7125307125307, Blast_Score=144, Evalue=5e-34,
Organism=Homo sapiens, GI156105693, Length=524, Percent_Identity=25.381679389313, Blast_Score=91, Evalue=8e-18,
Organism=Homo sapiens, GI156105695, Length=524, Percent_Identity=25.381679389313, Blast_Score=89, Evalue=2e-17,
Organism=Escherichia coli, GI87082383, Length=667, Percent_Identity=36.8815592203898, Blast_Score=389, Evalue=1e-109,
Organism=Escherichia coli, GI1787542, Length=603, Percent_Identity=28.1923714759536, Blast_Score=156, Evalue=8e-39,
Organism=Caenorhabditis elegans, GI17553506, Length=502, Percent_Identity=30.2788844621514, Blast_Score=171, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI212645896, Length=334, Percent_Identity=35.3293413173653, Blast_Score=159, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI71980586, Length=317, Percent_Identity=21.7665615141956, Blast_Score=67, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6324552, Length=474, Percent_Identity=29.746835443038, Blast_Score=153, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6323943, Length=373, Percent_Identity=23.8605898123324, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24654592, Length=601, Percent_Identity=28.9517470881864, Blast_Score=173, Evalue=8e-43,
Organism=Drosophila melanogaster, GI19922976, Length=601, Percent_Identity=28.9517470881864, Blast_Score=172, Evalue=9e-43,
Organism=Drosophila melanogaster, GI24654597, Length=601, Percent_Identity=28.9517470881864, Blast_Score=172, Evalue=9e-43,
Organism=Drosophila melanogaster, GI24649634, Length=441, Percent_Identity=30.8390022675737, Blast_Score=162, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011129
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR022967
- InterPro:   IPR013223
- InterPro:   IPR001900
- InterPro:   IPR022966
- InterPro:   IPR004476
- InterPro:   IPR011805
- InterPro:   IPR013668 [H]

Pfam domain/function: PF08461 HTH_12; PF08206 OB_RNB; PF00773 RNB; PF00575 S1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 130307; Mature: 130176

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS50126 S1 ; PS01175 RIBONUCLEASE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSQDLLKQILAEADHPLGIKELLRLAGLHPGQQTELKRALRELVRQGDILKDGKRFVP
CCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCCC
RQPSRREADVRAREQGAPMAWRQRDAAGPREGGPDRGPRHAGQRAAGPGGFAARRHEPGA
CCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCC
RGKSAGWQERGPGRERRGASKHGGGFRQERAEWPGRRGRFSEVEEDGLLEGILHVHRDGF
CCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC
GFVHPLSGEGDNVFLPPHEAQRALDNDRVVVAVSGRPPRLEGRIVRVVQRRRELAVGTYV
CEEECCCCCCCEEEECCHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEE
VKGRYAVVYPTDSSLPGPIRVPLTQMAREGDLVKVQLGIGAQMLDPDRGLHGEVAGSLGK
EECEEEEEEECCCCCCCCEECCHHHHHCCCCEEEEEECCCCEEECCCCCCCHHHHCCCCC
PGTPSAEVLGVAYSQGFSDEFPPEVMAEADRYAVTVTEEEVRGEHRRDLRAIPLITIDGE
CCCCCHHHEEEHHHCCCCCCCCHHHHHCCCCEEEEEEHHHHCCHHHHCCEECCEEEECCC
DARDFDDAVCVEDRADGWRLVVAIADVTHYVWEGSALNAEALRRATSVYLPDRVLPMLPE
CCCCCCCCEEECCCCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHH
RLSNGICSLRPDEDRLCMVADMTFDRRGHRRSYDLYPAVMRSVARCTYNEVQDVLDGKDV
HHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PHRNAHKPHFERLMSLARALMKMRKERGAIDFDLPEHKVVLDEDGLPARMDKRERKDSHR
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEECCCCCCHHHHHHHHHHHHH
LIEECMLAANEAVATFFQNEGLPTVYRFHGEPDPEKLATFAALAEAYGFKMRVEDGVSSK
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCHH
ELDAFVSQLQGHPEQRALNQLLLRSMMQAVYTSSRVGHYGLAAEHYLHFTSPIRRYPDLL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
VHRLLKAHWARKGRKPSQSMLEREEDQLEDMAAQCSERERAAMQVEREVVSFYACLLMKD
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVGEEFAATVAAITDFGFFVELDEVHVEGLVKAETLGPGAKLDKLTHSLVYANGRRVRVG
HCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEC
QKLRVRLTSVNVTAKKIDFEALQFDGEAPLSRVATRGEQPQRRQAWTAEAPSHRERDGRR
CEEEEEEEEEEEEHHHCCHHHHCCCCCCHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHH
ERAGRPGRREREAAAASRGAPSGQYEETGPGRPRGRFSREGRREESAPHRKEPRFPPRAP
HHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC
EGQEPPRAESPAWPKRRTFIRPERQAPAPVSAETAEPLPPEAPSAPAPWELPAGEDASRS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PHPGFDRIRALASQRQRGPEPRGPSHGRSFQKPKPQGGPGPRFPAPKPGRESEDDRAFSM
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EPPRPPPEAPVEAPPPVPSRAVTETPIPVAPEPVRAEPVRAEPVSVEPPVTPAPEAEAAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC
PKRKAARKKAVAKATRTPARKKTVAAGSARQAAATKAKKPTAKAKKAAPARAAAKATKVA
CHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHH
ATKSKAKAPSKKAAKPAVARAAKPAKASGAAKKKAPSGRKKR
HHHHHHCCCCHHHCCHHHHHHCCCCHHCCCHHHCCCCCCCCC
>Mature Secondary Structure 
SLSQDLLKQILAEADHPLGIKELLRLAGLHPGQQTELKRALRELVRQGDILKDGKRFVP
CHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCCC
RQPSRREADVRAREQGAPMAWRQRDAAGPREGGPDRGPRHAGQRAAGPGGFAARRHEPGA
CCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCC
RGKSAGWQERGPGRERRGASKHGGGFRQERAEWPGRRGRFSEVEEDGLLEGILHVHRDGF
CCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC
GFVHPLSGEGDNVFLPPHEAQRALDNDRVVVAVSGRPPRLEGRIVRVVQRRRELAVGTYV
CEEECCCCCCCEEEECCHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEE
VKGRYAVVYPTDSSLPGPIRVPLTQMAREGDLVKVQLGIGAQMLDPDRGLHGEVAGSLGK
EECEEEEEEECCCCCCCCEECCHHHHHCCCCEEEEEECCCCEEECCCCCCCHHHHCCCCC
PGTPSAEVLGVAYSQGFSDEFPPEVMAEADRYAVTVTEEEVRGEHRRDLRAIPLITIDGE
CCCCCHHHEEEHHHCCCCCCCCHHHHHCCCCEEEEEEHHHHCCHHHHCCEECCEEEECCC
DARDFDDAVCVEDRADGWRLVVAIADVTHYVWEGSALNAEALRRATSVYLPDRVLPMLPE
CCCCCCCCEEECCCCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHH
RLSNGICSLRPDEDRLCMVADMTFDRRGHRRSYDLYPAVMRSVARCTYNEVQDVLDGKDV
HHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PHRNAHKPHFERLMSLARALMKMRKERGAIDFDLPEHKVVLDEDGLPARMDKRERKDSHR
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEECCCCCCHHHHHHHHHHHHH
LIEECMLAANEAVATFFQNEGLPTVYRFHGEPDPEKLATFAALAEAYGFKMRVEDGVSSK
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCHH
ELDAFVSQLQGHPEQRALNQLLLRSMMQAVYTSSRVGHYGLAAEHYLHFTSPIRRYPDLL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
VHRLLKAHWARKGRKPSQSMLEREEDQLEDMAAQCSERERAAMQVEREVVSFYACLLMKD
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVGEEFAATVAAITDFGFFVELDEVHVEGLVKAETLGPGAKLDKLTHSLVYANGRRVRVG
HCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEC
QKLRVRLTSVNVTAKKIDFEALQFDGEAPLSRVATRGEQPQRRQAWTAEAPSHRERDGRR
CEEEEEEEEEEEEHHHCCHHHHCCCCCCHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHH
ERAGRPGRREREAAAASRGAPSGQYEETGPGRPRGRFSREGRREESAPHRKEPRFPPRAP
HHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC
EGQEPPRAESPAWPKRRTFIRPERQAPAPVSAETAEPLPPEAPSAPAPWELPAGEDASRS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PHPGFDRIRALASQRQRGPEPRGPSHGRSFQKPKPQGGPGPRFPAPKPGRESEDDRAFSM
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EPPRPPPEAPVEAPPPVPSRAVTETPIPVAPEPVRAEPVRAEPVSVEPPVTPAPEAEAAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC
PKRKAARKKAVAKATRTPARKKTVAAGSARQAAATKAKKPTAKAKKAAPARAAAKATKVA
CHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHH
ATKSKAKAPSKKAAKPAVARAAKPAKASGAAKKKAPSGRKKR
HHHHHHCCCCHHHCCHHHHHHCCCCHHCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]