| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758740
Identifier: 108758740
GI number: 108758740
Start: 6997471
End: 6997959
Strand: Direct
Name: 108758740
Synonym: MXAN_5632
Alternate gene names: NA
Gene position: 6997471-6997959 (Clockwise)
Preceding gene: 108758106
Following gene: 108759925
Centisome position: 76.56
GC content: 74.64
Gene sequence:
>489_bases GTGTCCCGTCTTGCCCTGCCGACCCTGCTCCTCGCCCTGCTCACCACCGCGTGCTCGGAAGACCTGTGCACCCAGGCGCC CCGCTGTGACGACTCGGAAGCGCTCAACTGCGAGCCGGAGTGCAAAGTGGGCCCGTGCTCCAGCGGCCCCATCCTCCAGG CGTGCACCGAGCGCACGACGTGCACCGTCGTCCCCGGCGACCGCAACGACGCACGCTTCTACCGCTCCCGCGCCGTGTGC GCCGTCACCCTGGAGGCCTGCGACCCAGCGACCGCGGCCCCGCCCACCTGCGGGAGCGACCGCTTCGCCACCGGCTGCAG CGCCTACCGCCGCGACATCCGCGTGCCCTGCGCCCAGTCTGCGCTCTACTTCGCGCAGGTGCCCGCCTGCTGCCAGGGCC TGGGCACGGGCGACGGCGGCACCGACGCGGGCACGGGCGACGGTGACGCGGGCGTCCCCGACGCGGGCACGGCCGACGCC GGCATTTGA
Upstream 100 bases:
>100_bases ACGTCCGTCAGCTCCTGGCGGGCCTCACACCCTCTCCCGCGGGCCGCAGAATCCTGCTGAACTTCCTCGAGCGATTCACC TGACCTGACAGAGGCCCTCC
Downstream 100 bases:
>100_bases GGTAGAGAAGAAGCCATGGCGTCTCGCTGGGACCACCTCTTCGACCTCAAACCGACTTCCCTGCTGGAGCACCTCCTGGA GGAGGTGGCGAAGCTGCTGC
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSRLALPTLLLALLTTACSEDLCTQAPRCDDSEALNCEPECKVGPCSSGPILQACTERTTCTVVPGDRNDARFYRSRAVC AVTLEACDPATAAPPTCGSDRFATGCSAYRRDIRVPCAQSALYFAQVPACCQGLGTGDGGTDAGTGDGDAGVPDAGTADA GI
Sequences:
>Translated_162_residues MSRLALPTLLLALLTTACSEDLCTQAPRCDDSEALNCEPECKVGPCSSGPILQACTERTTCTVVPGDRNDARFYRSRAVC AVTLEACDPATAAPPTCGSDRFATGCSAYRRDIRVPCAQSALYFAQVPACCQGLGTGDGGTDAGTGDGDAGVPDAGTADA GI >Mature_161_residues SRLALPTLLLALLTTACSEDLCTQAPRCDDSEALNCEPECKVGPCSSGPILQACTERTTCTVVPGDRNDARFYRSRAVCA VTLEACDPATAAPPTCGSDRFATGCSAYRRDIRVPCAQSALYFAQVPACCQGLGTGDGGTDAGTGDGDAGVPDAGTADAG I
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16518; Mature: 16386
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 9.9 %Cys+Met (Translated Protein) 9.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLALPTLLLALLTTACSEDLCTQAPRCDDSEALNCEPECKVGPCSSGPILQACTERTT CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCE CTVVPGDRNDARFYRSRAVCAVTLEACDPATAAPPTCGSDRFATGCSAYRRDIRVPCAQS EEEECCCCCHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHH ALYFAQVPACCQGLGTGDGGTDAGTGDGDAGVPDAGTADAGI HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRLALPTLLLALLTTACSEDLCTQAPRCDDSEALNCEPECKVGPCSSGPILQACTERTT CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCE CTVVPGDRNDARFYRSRAVCAVTLEACDPATAAPPTCGSDRFATGCSAYRRDIRVPCAQS EEEECCCCCHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHH ALYFAQVPACCQGLGTGDGGTDAGTGDGDAGVPDAGTADAGI HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA