| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is fecA [H]
Identifier: 108758731
GI number: 108758731
Start: 6277745
End: 6280153
Strand: Reverse
Name: fecA [H]
Synonym: MXAN_5023
Alternate gene names: 108758731
Gene position: 6280153-6277745 (Counterclockwise)
Preceding gene: 108757916
Following gene: 108762094
Centisome position: 68.71
GC content: 70.73
Gene sequence:
>2409_bases ATGTGGGCGCGGAGCTGGACACTTCCTGCGCTCTTGCTGGCATGGGCCTCCCCGGCCGCGGCGCAGTCCGAGCCGCCCCA GGACGCCGCCGCCGTGGCTCCCGAGCCGTCGCAGGTGCAGGACGCCGCCGCCGTTCCTGAAGCGCCGCAGGCGCAGGACA CCGTCGTCGTCCCTGAAGCGCCGCAGGCGCAGGACACCGCCGCCGAGGAGGCGCAGCAGGCCGAGCCGGCGCAGGCGCCC GTGGGCGACGCGCCGCTGGCCATCGAGCCCCCCGCGGGCGAGCCACTGGTGCTGGAGCCTTCACCCGAGGCGGTGGAGAA GAGATTCGAGAGCGTGGTGGTGGGCACCTCGGAGGCGCGCACGAGCGGCTCCATCCACGTGCTCAAGCCCGCGCAGTTGG AGCGCTTCGAGCGCGATGACCCGGCCGCCATCCTCCAGACGGTGCCCGGTGTGTACTCCCGCGGCGAGGACGGCTTTGGC CTGCGGCCGAACGTGGGCTTGCGCGGCGTCAATCCGGACCGCAGCAAGAAGGTCACCCTTTTGGAGGACGGTGTCCTCTT CGGCCCCGCGCCGTACTCCGCGCCGGCGGCCTACTACTTCCCGCTGGCCACGCGCATGCAGAGCATCCGCGTGCTCAAGG GGCCCTCGGCCATCCAGCAGGGACCGCAGACGGTGGGCGGCTCCGTGGAGTTCATCACCCGGGACATCCCCGCGTCCGAG TCCGCCTGGCTGGACGTGGCGGGCGGCGAGTACCTCTACGGCAAGGCCCACGGCGTCTTCGGCGCCAGCACCGAGCGCGC GGGCTTCCTGCTCGAAGGCGTCCACCTGCGCAGTGACGGCTTCAAGGAGCTGGACACCGTTGGCGGCAACACGGGCTTCA CCCGCAACGAGTGGATGGCCAAGGGCAGCTACCTGCTCGTCCCCGAGGGCCCCGTGCGCCAGACGCTCCAGCTCAAGCTG GGCTACTCGGACGAGGACTCGAACGAGACGTACCTGGGCCTGAGCAGCGCGGACTTCGCCGCCGCGCCGCTGCGCCGCTA CGTCGCGAGCGCCCTGGACCACATGAAGTGGCACCGCACGCAGGTGGTGCTCAGCCACGAGCTCGAAGCGGGCGGGCTGG CCGTGACGACGTCCGTCTACCGGCATGACCTGAGCCGGGTGTGGCGCAAGGTGAACCGCTTCCGCGGCGCCTCCATCGCC AGCGTGTTGGCGGACCCCGCGAGCGCGCGCAACTCCATCTACTACGGCGTGCTCACGGGCGAGCTGGACACGTCGTCGTC CCAGGACGCGCTGCTCATCGGCCCCAACGACCGCACGTACGTGTCCCAGGGACTCCAGAGCATCGCGCGTTGGACGGCCA CCACCGGGCCGCTGAGCCACAACCTCGAGCTGGGCGCGCGCTTCCACTACGACAGCATCCGCCGCCTCCATACCGAGGAT GCCTTCCTGATGCAGGGCGGCCAGCTCGTGTGGACCAGCGAGCCCACGTACACGACGGCCGACAACAAGGACTCCACGCA CGCCCTCGCCCTGCACGCGACGGACGCCATCGGCTGGGGGCCCCTGGTGCTGACGCCGGGCGTGCGCATGGAAATCATCC GCTCGGCGTCGCGGAACCACATGACGGGCACCGAGTCGAGCGGCGCGCTGGAGGTGCTCATGCCGGGCATGGGCATCTAC GGTGCACTGACGCGCGAGCTGGGCCTGTTCGCGGGCGCCTATCGCGGCTTCTCGCCCCCGGCGCCCGGACAGCCGGACGC GGTGCTGCCGGAGAAGAGCATCAACTACGAGGCCGGCGCGCGGTGGACCCGCCGTGGCGAGCGGCTGGAGGCGGTGGGCT TCTTCAACGACTACTCGAACCTCACCGACATCTGCACGTTCTCCAGCGGCTGTCTCAACGACGCCCTCGACCGGCAGACG GACGCGGGCAAGGCCTACATCTACGGCCTGGAAGTCTTCGGTGAGAAGACCTTCCGTCCGGGCGGGGGCGTGACGTTCCC CGTCTCGCTGTCCTACACCTTCACGCGCACGCGGCTGCGTGAGGACTTCCAGTCGGCGGACCCGCAGTTCGGCAACGTGC GTGCGGGCGACGAGCTGCCCTACGTGCCCCAGCACCAGCTCTACGCCACCGCGGGCGTGGAGACGTCCTGGGGCGGCCTG GCCCTGAGCGCCTTCTATGTGGACGCCATGCGCGAGCAGGCGGGGCAGGGCGAGGTGTCTCCGGAGCTGCTGACGGACGC GCTGCTGACGTTCGACGTCAACGCGAGTTGGAACTTCTCCCGCTGGGGGCAGCTGTACCTGAGCGCGCGCAACATCCTGG ACGAGCAGGCCGTCGTGTCGCGCCGTCCCTACGGTGCCCGGCCCAACGCGCCTCGGGCCGTCATCGTGGGCGTCAAGCTG GGCATCTGA
Upstream 100 bases:
>100_bases CGGGCGGGCCTCCAGCCCTGGCTCCTGGCTTTTGAGTCGTCGGACATCCCGGTCAGACAAGGTCGAAACGCTTCAGATGG CACTGTTCGAGCAGAAGCTG
Downstream 100 bases:
>100_bases AGCCCGGACACCACCGCGGGCGGCGTCTCGCTTCTAGAGATAGAAGCGGTCCGTCACGCCCGCGGTGCGCTGGAGGATGG CGCTCCAGCCCAGCCACAGG
Product: TonB dependent receptor
Products: NA
Alternate protein names: Iron(III) dicitrate transport protein fecA [H]
Number of amino acids: Translated: 802; Mature: 802
Protein sequence:
>802_residues MWARSWTLPALLLAWASPAAAQSEPPQDAAAVAPEPSQVQDAAAVPEAPQAQDTVVVPEAPQAQDTAAEEAQQAEPAQAP VGDAPLAIEPPAGEPLVLEPSPEAVEKRFESVVVGTSEARTSGSIHVLKPAQLERFERDDPAAILQTVPGVYSRGEDGFG LRPNVGLRGVNPDRSKKVTLLEDGVLFGPAPYSAPAAYYFPLATRMQSIRVLKGPSAIQQGPQTVGGSVEFITRDIPASE SAWLDVAGGEYLYGKAHGVFGASTERAGFLLEGVHLRSDGFKELDTVGGNTGFTRNEWMAKGSYLLVPEGPVRQTLQLKL GYSDEDSNETYLGLSSADFAAAPLRRYVASALDHMKWHRTQVVLSHELEAGGLAVTTSVYRHDLSRVWRKVNRFRGASIA SVLADPASARNSIYYGVLTGELDTSSSQDALLIGPNDRTYVSQGLQSIARWTATTGPLSHNLELGARFHYDSIRRLHTED AFLMQGGQLVWTSEPTYTTADNKDSTHALALHATDAIGWGPLVLTPGVRMEIIRSASRNHMTGTESSGALEVLMPGMGIY GALTRELGLFAGAYRGFSPPAPGQPDAVLPEKSINYEAGARWTRRGERLEAVGFFNDYSNLTDICTFSSGCLNDALDRQT DAGKAYIYGLEVFGEKTFRPGGGVTFPVSLSYTFTRTRLREDFQSADPQFGNVRAGDELPYVPQHQLYATAGVETSWGGL ALSAFYVDAMREQAGQGEVSPELLTDALLTFDVNASWNFSRWGQLYLSARNILDEQAVVSRRPYGARPNAPRAVIVGVKL GI
Sequences:
>Translated_802_residues MWARSWTLPALLLAWASPAAAQSEPPQDAAAVAPEPSQVQDAAAVPEAPQAQDTVVVPEAPQAQDTAAEEAQQAEPAQAP VGDAPLAIEPPAGEPLVLEPSPEAVEKRFESVVVGTSEARTSGSIHVLKPAQLERFERDDPAAILQTVPGVYSRGEDGFG LRPNVGLRGVNPDRSKKVTLLEDGVLFGPAPYSAPAAYYFPLATRMQSIRVLKGPSAIQQGPQTVGGSVEFITRDIPASE SAWLDVAGGEYLYGKAHGVFGASTERAGFLLEGVHLRSDGFKELDTVGGNTGFTRNEWMAKGSYLLVPEGPVRQTLQLKL GYSDEDSNETYLGLSSADFAAAPLRRYVASALDHMKWHRTQVVLSHELEAGGLAVTTSVYRHDLSRVWRKVNRFRGASIA SVLADPASARNSIYYGVLTGELDTSSSQDALLIGPNDRTYVSQGLQSIARWTATTGPLSHNLELGARFHYDSIRRLHTED AFLMQGGQLVWTSEPTYTTADNKDSTHALALHATDAIGWGPLVLTPGVRMEIIRSASRNHMTGTESSGALEVLMPGMGIY GALTRELGLFAGAYRGFSPPAPGQPDAVLPEKSINYEAGARWTRRGERLEAVGFFNDYSNLTDICTFSSGCLNDALDRQT DAGKAYIYGLEVFGEKTFRPGGGVTFPVSLSYTFTRTRLREDFQSADPQFGNVRAGDELPYVPQHQLYATAGVETSWGGL ALSAFYVDAMREQAGQGEVSPELLTDALLTFDVNASWNFSRWGQLYLSARNILDEQAVVSRRPYGARPNAPRAVIVGVKL GI >Mature_802_residues MWARSWTLPALLLAWASPAAAQSEPPQDAAAVAPEPSQVQDAAAVPEAPQAQDTVVVPEAPQAQDTAAEEAQQAEPAQAP VGDAPLAIEPPAGEPLVLEPSPEAVEKRFESVVVGTSEARTSGSIHVLKPAQLERFERDDPAAILQTVPGVYSRGEDGFG LRPNVGLRGVNPDRSKKVTLLEDGVLFGPAPYSAPAAYYFPLATRMQSIRVLKGPSAIQQGPQTVGGSVEFITRDIPASE SAWLDVAGGEYLYGKAHGVFGASTERAGFLLEGVHLRSDGFKELDTVGGNTGFTRNEWMAKGSYLLVPEGPVRQTLQLKL GYSDEDSNETYLGLSSADFAAAPLRRYVASALDHMKWHRTQVVLSHELEAGGLAVTTSVYRHDLSRVWRKVNRFRGASIA SVLADPASARNSIYYGVLTGELDTSSSQDALLIGPNDRTYVSQGLQSIARWTATTGPLSHNLELGARFHYDSIRRLHTED AFLMQGGQLVWTSEPTYTTADNKDSTHALALHATDAIGWGPLVLTPGVRMEIIRSASRNHMTGTESSGALEVLMPGMGIY GALTRELGLFAGAYRGFSPPAPGQPDAVLPEKSINYEAGARWTRRGERLEAVGFFNDYSNLTDICTFSSGCLNDALDRQT DAGKAYIYGLEVFGEKTFRPGGGVTFPVSLSYTFTRTRLREDFQSADPQFGNVRAGDELPYVPQHQLYATAGVETSWGGL ALSAFYVDAMREQAGQGEVSPELLTDALLTFDVNASWNFSRWGQLYLSARNILDEQAVVSRRPYGARPNAPRAVIVGVKL GI
Specific function: FecA is the outer membrane receptor protein in the Fe(3+) dicitrate transport system [H]
COG id: COG4772
COG function: function code P; Outer membrane receptor for Fe3+-dicitrate
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1790743, Length=657, Percent_Identity=24.3531202435312, Blast_Score=102, Evalue=8e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR011662 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 86474; Mature: 86474
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWARSWTLPALLLAWASPAAAQSEPPQDAAAVAPEPSQVQDAAAVPEAPQAQDTVVVPEA CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEECCCC PQAQDTAAEEAQQAEPAQAPVGDAPLAIEPPAGEPLVLEPSPEAVEKRFESVVVGTSEAR CCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEECCCHHHHHHHHHHEEECCCCCC TSGSIHVLKPAQLERFERDDPAAILQTVPGVYSRGEDGFGLRPNVGLRGVNPDRSKKVTL CCCCEEEECCHHHHHHCCCCHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEE LEDGVLFGPAPYSAPAAYYFPLATRMQSIRVLKGPSAIQQGPQTVGGSVEFITRDIPASE EECCEEECCCCCCCCCEEEHHHHHHHHHHEEECCCHHHHCCCHHCCCCEEEEEECCCCCC SAWLDVAGGEYLYGKAHGVFGASTERAGFLLEGVHLRSDGFKELDTVGGNTGFTRNEWMA CCEEEECCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHCCCCCCCCCCHHCC KGSYLLVPEGPVRQTLQLKLGYSDEDSNETYLGLSSADFAAAPLRRYVASALDHMKWHRT CCCEEEECCCCCCEEEEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH QVVLSHELEAGGLAVTTSVYRHDLSRVWRKVNRFRGASIASVLADPASARNSIYYGVLTG EEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHCCCEEEEEEEC ELDTSSSQDALLIGPNDRTYVSQGLQSIARWTATTGPLSHNLELGARFHYDSIRRLHTED CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECEEECHHHHHHHCCCC AFLMQGGQLVWTSEPTYTTADNKDSTHALALHATDAIGWGPLVLTPGVRMEIIRSASRNH CEEEECCEEEECCCCCEECCCCCCCCEEEEEEECCCCCCCCEEECCCCHHHHHHHCCCCC MTGTESSGALEVLMPGMGIYGALTRELGLFAGAYRGFSPPAPGQPDAVLPEKSINYEAGA CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC RWTRRGERLEAVGFFNDYSNLTDICTFSSGCLNDALDRQTDAGKAYIYGLEVFGEKTFRP CHHHCCCEEEEEEEECCCCCHHHHHHCCCCHHHHHHHCCCCCCCEEEEEEEEECCCCCCC GGGVTFPVSLSYTFTRTRLREDFQSADPQFGNVRAGDELPYVPQHQLYATAGVETSWGGL CCCEEEEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCH ALSAFYVDAMREQAGQGEVSPELLTDALLTFDVNASWNFSRWGQLYLSARNILDEQAVVS HHHHHHHHHHHHHCCCCCCCHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH RRPYGARPNAPRAVIVGVKLGI CCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MWARSWTLPALLLAWASPAAAQSEPPQDAAAVAPEPSQVQDAAAVPEAPQAQDTVVVPEA CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEECCCC PQAQDTAAEEAQQAEPAQAPVGDAPLAIEPPAGEPLVLEPSPEAVEKRFESVVVGTSEAR CCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEECCCHHHHHHHHHHEEECCCCCC TSGSIHVLKPAQLERFERDDPAAILQTVPGVYSRGEDGFGLRPNVGLRGVNPDRSKKVTL CCCCEEEECCHHHHHHCCCCHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEE LEDGVLFGPAPYSAPAAYYFPLATRMQSIRVLKGPSAIQQGPQTVGGSVEFITRDIPASE EECCEEECCCCCCCCCEEEHHHHHHHHHHEEECCCHHHHCCCHHCCCCEEEEEECCCCCC SAWLDVAGGEYLYGKAHGVFGASTERAGFLLEGVHLRSDGFKELDTVGGNTGFTRNEWMA CCEEEECCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHCCCCCCCCCCHHCC KGSYLLVPEGPVRQTLQLKLGYSDEDSNETYLGLSSADFAAAPLRRYVASALDHMKWHRT CCCEEEECCCCCCEEEEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH QVVLSHELEAGGLAVTTSVYRHDLSRVWRKVNRFRGASIASVLADPASARNSIYYGVLTG EEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHCCCEEEEEEEC ELDTSSSQDALLIGPNDRTYVSQGLQSIARWTATTGPLSHNLELGARFHYDSIRRLHTED CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECEEECHHHHHHHCCCC AFLMQGGQLVWTSEPTYTTADNKDSTHALALHATDAIGWGPLVLTPGVRMEIIRSASRNH CEEEECCEEEECCCCCEECCCCCCCCEEEEEEECCCCCCCCEEECCCCHHHHHHHCCCCC MTGTESSGALEVLMPGMGIYGALTRELGLFAGAYRGFSPPAPGQPDAVLPEKSINYEAGA CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC RWTRRGERLEAVGFFNDYSNLTDICTFSSGCLNDALDRQTDAGKAYIYGLEVFGEKTFRP CHHHCCCEEEEEEEECCCCCHHHHHHCCCCHHHHHHHCCCCCCCEEEEEEEEECCCCCCC GGGVTFPVSLSYTFTRTRLREDFQSADPQFGNVRAGDELPYVPQHQLYATAGVETSWGGL CCCEEEEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCH ALSAFYVDAMREQAGQGEVSPELLTDALLTFDVNASWNFSRWGQLYLSARNILDEQAVVS HHHHHHHHHHHHHCCCCCCCHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH RRPYGARPNAPRAVIVGVKLGI CCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2836368; 7610040; 9278503; 2254251; 2651410 [H]