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The map label for this gene is yclF [H]

Identifier: 108758720

GI number: 108758720

Start: 3035397

End: 3036785

Strand: Direct

Name: yclF [H]

Synonym: MXAN_2607

Alternate gene names: 108758720

Gene position: 3035397-3036785 (Clockwise)

Preceding gene: 108761373

Following gene: 108760853

Centisome position: 33.21

GC content: 66.23

Gene sequence:

>1389_bases
ATGCAAGGCACCGTAGCCGCGGGTGATGCCCGCAAGGGGCACCCGCGAGGGCTCTACCTCCTGTTCTTCACTGAGATGTG
GGAACGCATGTCGTATTACGGCATGCGTGGCCTGCTCGTGCTCTTCCTCACGAGCAAGGTCAACGGAGGATTTGGCTGGT
CCACCGCGGACGCACTCAGCCTCTACGGCACCTATACGGGCCTGGTGTACCTGACGCCCATCGCCGGCGGCTTCATCGCG
GACCGCTACATGGGGCAGCGCCGGGCGGTGGTGCTCGGTGGCGTGTTGATGATGATAGGCCACCTCATCCTGGCCTTGCC
CAGCGTGACGATGTTCTACGCGGGCCTGGGCTTCCTCATCATCGGCAACGGCTTCTTCAAGCCGAACATCTCCACCATGG
TGGGCGGGCTGTACGCGCCCGGTGACGGCCGTCGCGACAGCGCCTTCACCATCTTCTACATGGGCATCAACCTGGGCGCG
GTGCTCGGCAACTTCATCTGCGGCACGCTGGGTGAGCGCGTGGGCTGGCACTGGGGCTTCGGCGCCGCCGGCGTGGGCAT
GCTCCTGGGCCTGATCGCCTTCGTGTCGATGCAGAACAAGCTGCTGGGGCAGGTGGGCCTGGTGCCGGAGCGGATGGTGG
CCGCCGCCGAGGCGAAGCCGGGCACCCCGGAGAAGTCGGGCTTCGGCCGCGATGAAATCGACCGCATCCTCGTCATCTTC
ATCATGGCGCTGTTCGTCGTCGCCTTCTGGACGGGGTTCGAGCAGGCCGGTGGTTTGATGAACCTCTACACGAACGCGAA
GGTGGACCGCGGCATCCTGGGTTGGGAAGTGCCGACGACCTGGTTCCAGAACTTCAACTCCATCTTCATCGTCACGCTGG
CGCCGATTTTCGCCGGCCTGTGGAGCTGGCTGGCCGCGCGCGGCAAGGACCCGAGCATCCCGGTGAAGATGAGCATGGGC
CTGCTGTTCCTCTCCGCCGGCTTCCTCTTCATGCTGGGCGCCTCCAGCGAGAGCGCCTCGACGGGCAAGGCGGCGGCGTG
GTGGGTGGTGATGGCCTACCTGCTGCACACCATGGGTGAGCTGTGCCTGTCGCCCGTGGGCCTGTCCATGGTGACCAAGG
TGGCGCCGGCGCGCATCGTTTCCGCGATGATGGGCGTGTGGTTCCTCGCGAACGCGGCGGCCAACAAGCTGGCCGGTGTC
TTCGGTGGCTACTCGGAGAAGCTGGGCGAGTTCAGCGTGTTCCTCTACATCTCCGTGGGAACGGGCATCGCCGGCGTGCT
GCTGCTCGTCGTGTCGCCCATCCTCAAGCGGATGATGCACGGCACGGACGAGGTGAAGCCCGCCGCGCCCACCTCCGCGC
AGCAGGGCGGCTCGGTGGCGGCGGCCTGA

Upstream 100 bases:

>100_bases
TTCCCTACCCGCTCAGGTGTCCTCCTGGGCACGGCCCGCGTGTCTGCTACAGTCACGCTCCTTTTTCGTCGCACCCTCCT
TTTTCAAGGAAACGACCTGC

Downstream 100 bases:

>100_bases
GCGGTCGCGGACTCCCCTGATTGAAGTCCAGACGCCGGCGTCCCGATGGGGGCGCCGGCGTTTCTGTTCGCGGACTGCTG
GCGCCACGCCTGAAACACAA

Product: proton/peptide symporter family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MQGTVAAGDARKGHPRGLYLLFFTEMWERMSYYGMRGLLVLFLTSKVNGGFGWSTADALSLYGTYTGLVYLTPIAGGFIA
DRYMGQRRAVVLGGVLMMIGHLILALPSVTMFYAGLGFLIIGNGFFKPNISTMVGGLYAPGDGRRDSAFTIFYMGINLGA
VLGNFICGTLGERVGWHWGFGAAGVGMLLGLIAFVSMQNKLLGQVGLVPERMVAAAEAKPGTPEKSGFGRDEIDRILVIF
IMALFVVAFWTGFEQAGGLMNLYTNAKVDRGILGWEVPTTWFQNFNSIFIVTLAPIFAGLWSWLAARGKDPSIPVKMSMG
LLFLSAGFLFMLGASSESASTGKAAAWWVVMAYLLHTMGELCLSPVGLSMVTKVAPARIVSAMMGVWFLANAAANKLAGV
FGGYSEKLGEFSVFLYISVGTGIAGVLLLVVSPILKRMMHGTDEVKPAAPTSAQQGGSVAAA

Sequences:

>Translated_462_residues
MQGTVAAGDARKGHPRGLYLLFFTEMWERMSYYGMRGLLVLFLTSKVNGGFGWSTADALSLYGTYTGLVYLTPIAGGFIA
DRYMGQRRAVVLGGVLMMIGHLILALPSVTMFYAGLGFLIIGNGFFKPNISTMVGGLYAPGDGRRDSAFTIFYMGINLGA
VLGNFICGTLGERVGWHWGFGAAGVGMLLGLIAFVSMQNKLLGQVGLVPERMVAAAEAKPGTPEKSGFGRDEIDRILVIF
IMALFVVAFWTGFEQAGGLMNLYTNAKVDRGILGWEVPTTWFQNFNSIFIVTLAPIFAGLWSWLAARGKDPSIPVKMSMG
LLFLSAGFLFMLGASSESASTGKAAAWWVVMAYLLHTMGELCLSPVGLSMVTKVAPARIVSAMMGVWFLANAAANKLAGV
FGGYSEKLGEFSVFLYISVGTGIAGVLLLVVSPILKRMMHGTDEVKPAAPTSAQQGGSVAAA
>Mature_462_residues
MQGTVAAGDARKGHPRGLYLLFFTEMWERMSYYGMRGLLVLFLTSKVNGGFGWSTADALSLYGTYTGLVYLTPIAGGFIA
DRYMGQRRAVVLGGVLMMIGHLILALPSVTMFYAGLGFLIIGNGFFKPNISTMVGGLYAPGDGRRDSAFTIFYMGINLGA
VLGNFICGTLGERVGWHWGFGAAGVGMLLGLIAFVSMQNKLLGQVGLVPERMVAAAEAKPGTPEKSGFGRDEIDRILVIF
IMALFVVAFWTGFEQAGGLMNLYTNAKVDRGILGWEVPTTWFQNFNSIFIVTLAPIFAGLWSWLAARGKDPSIPVKMSMG
LLFLSAGFLFMLGASSESASTGKAAAWWVVMAYLLHTMGELCLSPVGLSMVTKVAPARIVSAMMGVWFLANAAANKLAGV
FGGYSEKLGEFSVFLYISVGTGIAGVLLLVVSPILKRMMHGTDEVKPAAPTSAQQGGSVAAA

Specific function: Unknown

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family [H]

Homologues:

Organism=Homo sapiens, GI4827008, Length=369, Percent_Identity=26.8292682926829, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI226371746, Length=354, Percent_Identity=22.5988700564972, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI226371748, Length=344, Percent_Identity=22.3837209302326, Blast_Score=80, Evalue=5e-15,
Organism=Escherichia coli, GI1789911, Length=478, Percent_Identity=28.0334728033473, Blast_Score=208, Evalue=7e-55,
Organism=Escherichia coli, GI1787922, Length=478, Percent_Identity=27.8242677824268, Blast_Score=201, Evalue=6e-53,
Organism=Escherichia coli, GI1786927, Length=444, Percent_Identity=28.8288288288288, Blast_Score=198, Evalue=5e-52,
Organism=Escherichia coli, GI1790572, Length=440, Percent_Identity=30.2272727272727, Blast_Score=196, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI71987453, Length=357, Percent_Identity=25.7703081232493, Blast_Score=89, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17569141, Length=382, Percent_Identity=23.5602094240838, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17541704, Length=342, Percent_Identity=21.6374269005848, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI28571098, Length=328, Percent_Identity=25, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28571102, Length=328, Percent_Identity=25, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28571100, Length=328, Percent_Identity=25, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24639583, Length=324, Percent_Identity=24.3827160493827, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24639585, Length=324, Percent_Identity=24.3827160493827, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24639581, Length=324, Percent_Identity=24.3827160493827, Blast_Score=91, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 49239; Mature: 49239

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS01022 PTR2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGTVAAGDARKGHPRGLYLLFFTEMWERMSYYGMRGLLVLFLTSKVNGGFGWSTADALS
CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
LYGTYTGLVYLTPIAGGFIADRYMGQRRAVVLGGVLMMIGHLILALPSVTMFYAGLGFLI
HHHHHHHHEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
IGNGFFKPNISTMVGGLYAPGDGRRDSAFTIFYMGINLGAVLGNFICGTLGERVGWHWGF
EECCCCCCCHHHHHCCEECCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCC
GAAGVGMLLGLIAFVSMQNKLLGQVGLVPERMVAAAEAKPGTPEKSGFGRDEIDRILVIF
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
IMALFVVAFWTGFEQAGGLMNLYTNAKVDRGILGWEVPTTWFQNFNSIFIVTLAPIFAGL
HHHHHHHHHHHCHHHHCCEEEECCCCCCCCCCCCCCCCHHHHHCCCCEEEHHHHHHHHHH
WSWLAARGKDPSIPVKMSMGLLFLSAGFLFMLGASSESASTGKAAAWWVVMAYLLHTMGE
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
LCLSPVGLSMVTKVAPARIVSAMMGVWFLANAAANKLAGVFGGYSEKLGEFSVFLYISVG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEEEEEC
TGIAGVLLLVVSPILKRMMHGTDEVKPAAPTSAQQGGSVAAA
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQGTVAAGDARKGHPRGLYLLFFTEMWERMSYYGMRGLLVLFLTSKVNGGFGWSTADALS
CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
LYGTYTGLVYLTPIAGGFIADRYMGQRRAVVLGGVLMMIGHLILALPSVTMFYAGLGFLI
HHHHHHHHEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
IGNGFFKPNISTMVGGLYAPGDGRRDSAFTIFYMGINLGAVLGNFICGTLGERVGWHWGF
EECCCCCCCHHHHHCCEECCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCC
GAAGVGMLLGLIAFVSMQNKLLGQVGLVPERMVAAAEAKPGTPEKSGFGRDEIDRILVIF
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
IMALFVVAFWTGFEQAGGLMNLYTNAKVDRGILGWEVPTTWFQNFNSIFIVTLAPIFAGL
HHHHHHHHHHHCHHHHCCEEEECCCCCCCCCCCCCCCCHHHHHCCCCEEEHHHHHHHHHH
WSWLAARGKDPSIPVKMSMGLLFLSAGFLFMLGASSESASTGKAAAWWVVMAYLLHTMGE
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
LCLSPVGLSMVTKVAPARIVSAMMGVWFLANAAANKLAGVFGGYSEKLGEFSVFLYISVG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEEEEEC
TGIAGVLLLVVSPILKRMMHGTDEVKPAAPTSAQQGGSVAAA
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]