Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is 108758706

Identifier: 108758706

GI number: 108758706

Start: 1745892

End: 1747238

Strand: Reverse

Name: 108758706

Synonym: MXAN_1482

Alternate gene names: NA

Gene position: 1747238-1745892 (Counterclockwise)

Preceding gene: 108763642

Following gene: 108761750

Centisome position: 19.12

GC content: 67.93

Gene sequence:

>1347_bases
GTGTCGGCGTGGCGCATCTGCCAGCTCCAAGTTGCTTGCCCACGGGGCCTGGCCGGTTGCCCGGCGTCCGTTCCGTCTGG
TATCGAATTCATCATGCCGCACGAGGCTGACTCGCCGCGGTGGGGGAAATCCATGTCCAGTCCGCACGGGGTGTTTCGAA
GGTTCGTCTCGCTGCTCCTCCTGTCGCTGGCGCCGCCCGCGTTCGCCGCGGCGCCCTTCACCGAGGGGATGGTCACCATC
ACCCTGGACGACGGCTGGGCCACGCAGTTCTCGCTGGCCCGCCCCGAACTCAACGCGCGGAACATCCCCGCCACCTACGG
TCTCGTCACCCTGGCCATCCACGAAGGATGGGGCGGCTACATGTCGCTGGCGCAAGCCCAGACGCTCGTCACCGACGGCA
ATGACATCGCCAGCCACACGCTGACACACCCAGACCTGACGTCGCTGTCCCCGACGCAGCTCGCGGCCGAGCTCCAGGAC
TCTCGTGCCTGGCTGGAGAGCGCGCTGGGCCTGCCCGCCGTCCCCAATCTCGTCGTGCCGTATGGCCTGCAGAACGGCCC
GGTGCTCGACGCCATCCGCCAGCATTACGCCAGCAGCCGCACGGTGAACGCGGGCCGCAACTTCCGCGACACCCTCGTCT
ACGAACTGCGCGCCAATGACGTGGCCCGCACCGTTCCGGTCAGCACCGTCCAGGGCTGGGTGGACCAGACCATCGCGGAG
AAGAGCTGGCTCATCCTCGTCTTCCACGAGTTCGTCAACGGCACGCCGACCCGTGACACCCAGTACGAGACGTCCCACTT
CGCGGACATCCTCGACTACGTGAAGACGCGCGGCGTGCGCACCGTGACGCTGGCCGAAGGATTGGCCCTGACGGAGGGGC
GCACCGAACCCGACCTGACCGCGGGCCTGTTCGTCTACACCGACGCGCTGCAGAATGGCTTCGCCAACTGGAGCTGGGCG
GACCACTCGCTCGATGAGACGGGGGTGGTCCATGCGGGCTCGGCCGCCATCCGCTTCGAGCCGGACACGTGGAATGGCCT
GCTCTTCCACCACCATGGGCTGGACCTGGCGCAGTATCAATCCATCCGCGTCTGGGTCCACGGCGGTACCGCGGGAGGAC
AGGCGGTGCGGCTGGTGCTCCATGATGGCACGCAGATGCTTGGCACCACCCGCCTGGACACCGCGCTGGGGGCGCCCATC
GCTCCGGGAGTCTGGCAGCAGGTGACGATTCCCCTCTCCAGCATCGGGGCCACCACGGGCACGCTGCGGGACATCTACTT
CCAGGACGACTCCGGCACGGACCAGCCGGCGCTGTACCTGGATGACGTGGTGCTCCTGCCGCAGTGA

Upstream 100 bases:

>100_bases
GCGCGGCGACCTTCTTCATGCAGCGAGTTCCTTTTCCAAGGGCCTACGGTGGCCCAGACGAACACGGGGCACCCCTATTC
GAATCCCTTGCCCCGCCCTG

Downstream 100 bases:

>100_bases
CGTCCTCAGTCCCACGCCGGGCGCATCGTCACCGCGCCGGCGACGCACCCGGTGACAGGCGGCCCAGCAAGTGGAGTTGG
CCGTCCTCCGCCATCACCCG

Product: polysaccharide deacetylase domain-containing protein

Products: NA

Alternate protein names: Polysaccharide Deacetylase Domain-Containing Protein; Alpha-L-Arabinofuranosidase-Like Protein

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MSAWRICQLQVACPRGLAGCPASVPSGIEFIMPHEADSPRWGKSMSSPHGVFRRFVSLLLLSLAPPAFAAAPFTEGMVTI
TLDDGWATQFSLARPELNARNIPATYGLVTLAIHEGWGGYMSLAQAQTLVTDGNDIASHTLTHPDLTSLSPTQLAAELQD
SRAWLESALGLPAVPNLVVPYGLQNGPVLDAIRQHYASSRTVNAGRNFRDTLVYELRANDVARTVPVSTVQGWVDQTIAE
KSWLILVFHEFVNGTPTRDTQYETSHFADILDYVKTRGVRTVTLAEGLALTEGRTEPDLTAGLFVYTDALQNGFANWSWA
DHSLDETGVVHAGSAAIRFEPDTWNGLLFHHHGLDLAQYQSIRVWVHGGTAGGQAVRLVLHDGTQMLGTTRLDTALGAPI
APGVWQQVTIPLSSIGATTGTLRDIYFQDDSGTDQPALYLDDVVLLPQ

Sequences:

>Translated_448_residues
MSAWRICQLQVACPRGLAGCPASVPSGIEFIMPHEADSPRWGKSMSSPHGVFRRFVSLLLLSLAPPAFAAAPFTEGMVTI
TLDDGWATQFSLARPELNARNIPATYGLVTLAIHEGWGGYMSLAQAQTLVTDGNDIASHTLTHPDLTSLSPTQLAAELQD
SRAWLESALGLPAVPNLVVPYGLQNGPVLDAIRQHYASSRTVNAGRNFRDTLVYELRANDVARTVPVSTVQGWVDQTIAE
KSWLILVFHEFVNGTPTRDTQYETSHFADILDYVKTRGVRTVTLAEGLALTEGRTEPDLTAGLFVYTDALQNGFANWSWA
DHSLDETGVVHAGSAAIRFEPDTWNGLLFHHHGLDLAQYQSIRVWVHGGTAGGQAVRLVLHDGTQMLGTTRLDTALGAPI
APGVWQQVTIPLSSIGATTGTLRDIYFQDDSGTDQPALYLDDVVLLPQ
>Mature_447_residues
SAWRICQLQVACPRGLAGCPASVPSGIEFIMPHEADSPRWGKSMSSPHGVFRRFVSLLLLSLAPPAFAAAPFTEGMVTIT
LDDGWATQFSLARPELNARNIPATYGLVTLAIHEGWGGYMSLAQAQTLVTDGNDIASHTLTHPDLTSLSPTQLAAELQDS
RAWLESALGLPAVPNLVVPYGLQNGPVLDAIRQHYASSRTVNAGRNFRDTLVYELRANDVARTVPVSTVQGWVDQTIAEK
SWLILVFHEFVNGTPTRDTQYETSHFADILDYVKTRGVRTVTLAEGLALTEGRTEPDLTAGLFVYTDALQNGFANWSWAD
HSLDETGVVHAGSAAIRFEPDTWNGLLFHHHGLDLAQYQSIRVWVHGGTAGGQAVRLVLHDGTQMLGTTRLDTALGAPIA
PGVWQQVTIPLSSIGATTGTLRDIYFQDDSGTDQPALYLDDVVLLPQ

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48557; Mature: 48426

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAWRICQLQVACPRGLAGCPASVPSGIEFIMPHEADSPRWGKSMSSPHGVFRRFVSLLL
CCCCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
LSLAPPAFAAAPFTEGMVTITLDDGWATQFSLARPELNARNIPATYGLVTLAIHEGWGGY
HHHCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCHHCEEEEEEECCCCHH
MSLAQAQTLVTDGNDIASHTLTHPDLTSLSPTQLAAELQDSRAWLESALGLPAVPNLVVP
HHHHHHHHEEECCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
YGLQNGPVLDAIRQHYASSRTVNAGRNFRDTLVYELRANDVARTVPVSTVQGWVDQTIAE
CCCCCCCHHHHHHHHHCCCCEECCCCCCCCEEEEEEECCCCHHHCCHHHHHHHHHHHHHC
KSWLILVFHEFVNGTPTRDTQYETSHFADILDYVKTRGVRTVTLAEGLALTEGRTEPDLT
CCCEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCEEECCCCCCCCCH
AGLFVYTDALQNGFANWSWADHSLDETGVVHAGSAAIRFEPDTWNGLLFHHHGLDLAQYQ
HHHHEEEHHHHCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCEEEEECCCCHHHEE
SIRVWVHGGTAGGQAVRLVLHDGTQMLGTTRLDTALGAPIAPGVWQQVTIPLSSIGATTG
EEEEEEECCCCCCEEEEEEEECCCHHHCCHHHHHHHCCCCCCCCCCEEEEEHHHCCCCCC
TLRDIYFQDDSGTDQPALYLDDVVLLPQ
CEEEEEEECCCCCCCCEEEECCEEECCC
>Mature Secondary Structure 
SAWRICQLQVACPRGLAGCPASVPSGIEFIMPHEADSPRWGKSMSSPHGVFRRFVSLLL
CCCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
LSLAPPAFAAAPFTEGMVTITLDDGWATQFSLARPELNARNIPATYGLVTLAIHEGWGGY
HHHCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCHHCEEEEEEECCCCHH
MSLAQAQTLVTDGNDIASHTLTHPDLTSLSPTQLAAELQDSRAWLESALGLPAVPNLVVP
HHHHHHHHEEECCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
YGLQNGPVLDAIRQHYASSRTVNAGRNFRDTLVYELRANDVARTVPVSTVQGWVDQTIAE
CCCCCCCHHHHHHHHHCCCCEECCCCCCCCEEEEEEECCCCHHHCCHHHHHHHHHHHHHC
KSWLILVFHEFVNGTPTRDTQYETSHFADILDYVKTRGVRTVTLAEGLALTEGRTEPDLT
CCCEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCEEECCCCCCCCCH
AGLFVYTDALQNGFANWSWADHSLDETGVVHAGSAAIRFEPDTWNGLLFHHHGLDLAQYQ
HHHHEEEHHHHCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCEEEEECCCCHHHEE
SIRVWVHGGTAGGQAVRLVLHDGTQMLGTTRLDTALGAPIAPGVWQQVTIPLSSIGATTG
EEEEEEECCCCCCEEEEEEEECCCHHHCCHHHHHHHCCCCCCCCCCEEEEEHHHCCCCCC
TLRDIYFQDDSGTDQPALYLDDVVLLPQ
CEEEEEEECCCCCCCCEEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA