| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758706
Identifier: 108758706
GI number: 108758706
Start: 1745892
End: 1747238
Strand: Reverse
Name: 108758706
Synonym: MXAN_1482
Alternate gene names: NA
Gene position: 1747238-1745892 (Counterclockwise)
Preceding gene: 108763642
Following gene: 108761750
Centisome position: 19.12
GC content: 67.93
Gene sequence:
>1347_bases GTGTCGGCGTGGCGCATCTGCCAGCTCCAAGTTGCTTGCCCACGGGGCCTGGCCGGTTGCCCGGCGTCCGTTCCGTCTGG TATCGAATTCATCATGCCGCACGAGGCTGACTCGCCGCGGTGGGGGAAATCCATGTCCAGTCCGCACGGGGTGTTTCGAA GGTTCGTCTCGCTGCTCCTCCTGTCGCTGGCGCCGCCCGCGTTCGCCGCGGCGCCCTTCACCGAGGGGATGGTCACCATC ACCCTGGACGACGGCTGGGCCACGCAGTTCTCGCTGGCCCGCCCCGAACTCAACGCGCGGAACATCCCCGCCACCTACGG TCTCGTCACCCTGGCCATCCACGAAGGATGGGGCGGCTACATGTCGCTGGCGCAAGCCCAGACGCTCGTCACCGACGGCA ATGACATCGCCAGCCACACGCTGACACACCCAGACCTGACGTCGCTGTCCCCGACGCAGCTCGCGGCCGAGCTCCAGGAC TCTCGTGCCTGGCTGGAGAGCGCGCTGGGCCTGCCCGCCGTCCCCAATCTCGTCGTGCCGTATGGCCTGCAGAACGGCCC GGTGCTCGACGCCATCCGCCAGCATTACGCCAGCAGCCGCACGGTGAACGCGGGCCGCAACTTCCGCGACACCCTCGTCT ACGAACTGCGCGCCAATGACGTGGCCCGCACCGTTCCGGTCAGCACCGTCCAGGGCTGGGTGGACCAGACCATCGCGGAG AAGAGCTGGCTCATCCTCGTCTTCCACGAGTTCGTCAACGGCACGCCGACCCGTGACACCCAGTACGAGACGTCCCACTT CGCGGACATCCTCGACTACGTGAAGACGCGCGGCGTGCGCACCGTGACGCTGGCCGAAGGATTGGCCCTGACGGAGGGGC GCACCGAACCCGACCTGACCGCGGGCCTGTTCGTCTACACCGACGCGCTGCAGAATGGCTTCGCCAACTGGAGCTGGGCG GACCACTCGCTCGATGAGACGGGGGTGGTCCATGCGGGCTCGGCCGCCATCCGCTTCGAGCCGGACACGTGGAATGGCCT GCTCTTCCACCACCATGGGCTGGACCTGGCGCAGTATCAATCCATCCGCGTCTGGGTCCACGGCGGTACCGCGGGAGGAC AGGCGGTGCGGCTGGTGCTCCATGATGGCACGCAGATGCTTGGCACCACCCGCCTGGACACCGCGCTGGGGGCGCCCATC GCTCCGGGAGTCTGGCAGCAGGTGACGATTCCCCTCTCCAGCATCGGGGCCACCACGGGCACGCTGCGGGACATCTACTT CCAGGACGACTCCGGCACGGACCAGCCGGCGCTGTACCTGGATGACGTGGTGCTCCTGCCGCAGTGA
Upstream 100 bases:
>100_bases GCGCGGCGACCTTCTTCATGCAGCGAGTTCCTTTTCCAAGGGCCTACGGTGGCCCAGACGAACACGGGGCACCCCTATTC GAATCCCTTGCCCCGCCCTG
Downstream 100 bases:
>100_bases CGTCCTCAGTCCCACGCCGGGCGCATCGTCACCGCGCCGGCGACGCACCCGGTGACAGGCGGCCCAGCAAGTGGAGTTGG CCGTCCTCCGCCATCACCCG
Product: polysaccharide deacetylase domain-containing protein
Products: NA
Alternate protein names: Polysaccharide Deacetylase Domain-Containing Protein; Alpha-L-Arabinofuranosidase-Like Protein
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MSAWRICQLQVACPRGLAGCPASVPSGIEFIMPHEADSPRWGKSMSSPHGVFRRFVSLLLLSLAPPAFAAAPFTEGMVTI TLDDGWATQFSLARPELNARNIPATYGLVTLAIHEGWGGYMSLAQAQTLVTDGNDIASHTLTHPDLTSLSPTQLAAELQD SRAWLESALGLPAVPNLVVPYGLQNGPVLDAIRQHYASSRTVNAGRNFRDTLVYELRANDVARTVPVSTVQGWVDQTIAE KSWLILVFHEFVNGTPTRDTQYETSHFADILDYVKTRGVRTVTLAEGLALTEGRTEPDLTAGLFVYTDALQNGFANWSWA DHSLDETGVVHAGSAAIRFEPDTWNGLLFHHHGLDLAQYQSIRVWVHGGTAGGQAVRLVLHDGTQMLGTTRLDTALGAPI APGVWQQVTIPLSSIGATTGTLRDIYFQDDSGTDQPALYLDDVVLLPQ
Sequences:
>Translated_448_residues MSAWRICQLQVACPRGLAGCPASVPSGIEFIMPHEADSPRWGKSMSSPHGVFRRFVSLLLLSLAPPAFAAAPFTEGMVTI TLDDGWATQFSLARPELNARNIPATYGLVTLAIHEGWGGYMSLAQAQTLVTDGNDIASHTLTHPDLTSLSPTQLAAELQD SRAWLESALGLPAVPNLVVPYGLQNGPVLDAIRQHYASSRTVNAGRNFRDTLVYELRANDVARTVPVSTVQGWVDQTIAE KSWLILVFHEFVNGTPTRDTQYETSHFADILDYVKTRGVRTVTLAEGLALTEGRTEPDLTAGLFVYTDALQNGFANWSWA DHSLDETGVVHAGSAAIRFEPDTWNGLLFHHHGLDLAQYQSIRVWVHGGTAGGQAVRLVLHDGTQMLGTTRLDTALGAPI APGVWQQVTIPLSSIGATTGTLRDIYFQDDSGTDQPALYLDDVVLLPQ >Mature_447_residues SAWRICQLQVACPRGLAGCPASVPSGIEFIMPHEADSPRWGKSMSSPHGVFRRFVSLLLLSLAPPAFAAAPFTEGMVTIT LDDGWATQFSLARPELNARNIPATYGLVTLAIHEGWGGYMSLAQAQTLVTDGNDIASHTLTHPDLTSLSPTQLAAELQDS RAWLESALGLPAVPNLVVPYGLQNGPVLDAIRQHYASSRTVNAGRNFRDTLVYELRANDVARTVPVSTVQGWVDQTIAEK SWLILVFHEFVNGTPTRDTQYETSHFADILDYVKTRGVRTVTLAEGLALTEGRTEPDLTAGLFVYTDALQNGFANWSWAD HSLDETGVVHAGSAAIRFEPDTWNGLLFHHHGLDLAQYQSIRVWVHGGTAGGQAVRLVLHDGTQMLGTTRLDTALGAPIA PGVWQQVTIPLSSIGATTGTLRDIYFQDDSGTDQPALYLDDVVLLPQ
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48557; Mature: 48426
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAWRICQLQVACPRGLAGCPASVPSGIEFIMPHEADSPRWGKSMSSPHGVFRRFVSLLL CCCCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH LSLAPPAFAAAPFTEGMVTITLDDGWATQFSLARPELNARNIPATYGLVTLAIHEGWGGY HHHCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCHHCEEEEEEECCCCHH MSLAQAQTLVTDGNDIASHTLTHPDLTSLSPTQLAAELQDSRAWLESALGLPAVPNLVVP HHHHHHHHEEECCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE YGLQNGPVLDAIRQHYASSRTVNAGRNFRDTLVYELRANDVARTVPVSTVQGWVDQTIAE CCCCCCCHHHHHHHHHCCCCEECCCCCCCCEEEEEEECCCCHHHCCHHHHHHHHHHHHHC KSWLILVFHEFVNGTPTRDTQYETSHFADILDYVKTRGVRTVTLAEGLALTEGRTEPDLT CCCEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCEEECCCCCCCCCH AGLFVYTDALQNGFANWSWADHSLDETGVVHAGSAAIRFEPDTWNGLLFHHHGLDLAQYQ HHHHEEEHHHHCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCEEEEECCCCHHHEE SIRVWVHGGTAGGQAVRLVLHDGTQMLGTTRLDTALGAPIAPGVWQQVTIPLSSIGATTG EEEEEEECCCCCCEEEEEEEECCCHHHCCHHHHHHHCCCCCCCCCCEEEEEHHHCCCCCC TLRDIYFQDDSGTDQPALYLDDVVLLPQ CEEEEEEECCCCCCCCEEEECCEEECCC >Mature Secondary Structure SAWRICQLQVACPRGLAGCPASVPSGIEFIMPHEADSPRWGKSMSSPHGVFRRFVSLLL CCCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH LSLAPPAFAAAPFTEGMVTITLDDGWATQFSLARPELNARNIPATYGLVTLAIHEGWGGY HHHCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCHHCEEEEEEECCCCHH MSLAQAQTLVTDGNDIASHTLTHPDLTSLSPTQLAAELQDSRAWLESALGLPAVPNLVVP HHHHHHHHEEECCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE YGLQNGPVLDAIRQHYASSRTVNAGRNFRDTLVYELRANDVARTVPVSTVQGWVDQTIAE CCCCCCCHHHHHHHHHCCCCEECCCCCCCCEEEEEEECCCCHHHCCHHHHHHHHHHHHHC KSWLILVFHEFVNGTPTRDTQYETSHFADILDYVKTRGVRTVTLAEGLALTEGRTEPDLT CCCEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCEEECCCCCCCCCH AGLFVYTDALQNGFANWSWADHSLDETGVVHAGSAAIRFEPDTWNGLLFHHHGLDLAQYQ HHHHEEEHHHHCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCEEEEECCCCHHHEE SIRVWVHGGTAGGQAVRLVLHDGTQMLGTTRLDTALGAPIAPGVWQQVTIPLSSIGATTG EEEEEEECCCCCCEEEEEEEECCCHHHCCHHHHHHHCCCCCCCCCCEEEEEHHHCCCCCC TLRDIYFQDDSGTDQPALYLDDVVLLPQ CEEEEEEECCCCCCCCEEEECCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA