| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758613
Identifier: 108758613
GI number: 108758613
Start: 6341913
End: 6343220
Strand: Reverse
Name: 108758613
Synonym: MXAN_5065
Alternate gene names: NA
Gene position: 6343220-6341913 (Counterclockwise)
Preceding gene: 108758028
Following gene: 108761926
Centisome position: 69.4
GC content: 65.98
Gene sequence:
>1308_bases ATGCCCACGCTGAGGATAGACGTCATCGAGGAGCACTTTTCCGAGGCGGCCTTCCTGTACTCGCAATGGGAGCGAGCACT GCGGGGAGCGAACTACAATCTGGAAGAGACAGCGCAGTTGGAGGAGCGGCTGCTGGCACATCTGGACGGACTGGTGCTCG GGGGGGAGCCCGTCGCCGAGGCTCTGCTCAGTCCCGCCCTGGACGGTGGGGAACCTGGGGAGGTGTTTTGCTCAGTGTTC GCCTCCATCGCCGAATCCCCACCTGCTGCGCTGGAAGTGGTACTCGCGCTGGCGCCGGTCGCGCCTCCAGAGGTACTGGC TTCGCTGCGGCGCGCGCTGGAACTCAGCGGGCGCACCGGGTTGGATGCGTCGCTGGTTCCGTTGCTGAAGGCACCCGAGG CATCCGTCCAGGCACTGGCATTGGAGGTGCTTTCGTTCCGCGGAGCCGTACCACGCGGAGTTGCTCTGAAACTGCTCGAC CAGGCGGATGGCCGGGTGGTGGCGGCGGCACTGCGGGGCCTTGGCACGCTGGAAAGAGATGTCGGGCACCGGGAGTTGCG GCGACTGTTGGACGACAATCGACCGCAGGTGCGACTGGCGGCCATCGAGTCTGGCCTGCTGTCTGGAGTACGCGCGGCAT GGGACGCATGCCGGCAGGAGGCGCAAGGCTGCGGCGAGGGCGCACCTCCGGCCCGACTGCTCCAGGCGATATGCGGGGAT GACGAGGACGTCGAGCGCCTGGTGGCGCTCATGGCCAATGACGTCGTCCGCGCGGACATCGTGTGGGCACTGGGCTTCAC AGGGCGGGTTGCTGCCGTGGAGGCTTGTCTGGAGTTGATGGGGCATGTGCCATCGGTGGCACGACTGGCTGGCGAGTCCT TTAGCGCCATCACCGGGCTGGTGCTGAAGGACACTTACGCCGTGGAGTTAGAGGAGGGGGATTCGCTCCCGCCACTGGAG GAAGATGACCTCGAAGCCGACCTTTCTTCCAAGGAAGAGGACAATCTGCCGGTGCCGGCCCGTGCAGCAGTCGCTGACTG GTGGCAGCGAGCGCGTCAGGATTACTCTCGGAGTGGACGCTACCTGGGCGGCAAGCCGTTCAGTGGCGCGGCGCTGTTGG ACGTGCTGGCGAGGGGGCCCATGCGTCGACGTCACGTCCACGCACGAGACCTGGCACTGAGGACGCAGGGCATACACGAC GTTCAAACACGTGCGTTCACTGCCCGACAGGGGGCGGAACTGGCCGAAGCACAGCGCGTGCGCGAGCACCTGTCGACACG TCCACTGAAGCGTGCTTTTGGGGGGTGA
Upstream 100 bases:
>100_bases ACGAACTTGGGTTGGCTTCTCGACACGGGGGTGGGAAGGCACTTGGGGGAGGCACTCACCACCCGGTGCAAGGACAGCTC GGGGCAGGTCAACTGACGTG
Downstream 100 bases:
>100_bases AGTTCCATGTGGGCACTGAAGAATCGCACTGCGTACGCTGCGGAGCGAAACTGGACGCGTGACAAGGAGGGGGTTCACTG GTGGCTCGTCGCGGTCAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MPTLRIDVIEEHFSEAAFLYSQWERALRGANYNLEETAQLEERLLAHLDGLVLGGEPVAEALLSPALDGGEPGEVFCSVF ASIAESPPAALEVVLALAPVAPPEVLASLRRALELSGRTGLDASLVPLLKAPEASVQALALEVLSFRGAVPRGVALKLLD QADGRVVAAALRGLGTLERDVGHRELRRLLDDNRPQVRLAAIESGLLSGVRAAWDACRQEAQGCGEGAPPARLLQAICGD DEDVERLVALMANDVVRADIVWALGFTGRVAAVEACLELMGHVPSVARLAGESFSAITGLVLKDTYAVELEEGDSLPPLE EDDLEADLSSKEEDNLPVPARAAVADWWQRARQDYSRSGRYLGGKPFSGAALLDVLARGPMRRRHVHARDLALRTQGIHD VQTRAFTARQGAELAEAQRVREHLSTRPLKRAFGG
Sequences:
>Translated_435_residues MPTLRIDVIEEHFSEAAFLYSQWERALRGANYNLEETAQLEERLLAHLDGLVLGGEPVAEALLSPALDGGEPGEVFCSVF ASIAESPPAALEVVLALAPVAPPEVLASLRRALELSGRTGLDASLVPLLKAPEASVQALALEVLSFRGAVPRGVALKLLD QADGRVVAAALRGLGTLERDVGHRELRRLLDDNRPQVRLAAIESGLLSGVRAAWDACRQEAQGCGEGAPPARLLQAICGD DEDVERLVALMANDVVRADIVWALGFTGRVAAVEACLELMGHVPSVARLAGESFSAITGLVLKDTYAVELEEGDSLPPLE EDDLEADLSSKEEDNLPVPARAAVADWWQRARQDYSRSGRYLGGKPFSGAALLDVLARGPMRRRHVHARDLALRTQGIHD VQTRAFTARQGAELAEAQRVREHLSTRPLKRAFGG >Mature_434_residues PTLRIDVIEEHFSEAAFLYSQWERALRGANYNLEETAQLEERLLAHLDGLVLGGEPVAEALLSPALDGGEPGEVFCSVFA SIAESPPAALEVVLALAPVAPPEVLASLRRALELSGRTGLDASLVPLLKAPEASVQALALEVLSFRGAVPRGVALKLLDQ ADGRVVAAALRGLGTLERDVGHRELRRLLDDNRPQVRLAAIESGLLSGVRAAWDACRQEAQGCGEGAPPARLLQAICGDD EDVERLVALMANDVVRADIVWALGFTGRVAAVEACLELMGHVPSVARLAGESFSAITGLVLKDTYAVELEEGDSLPPLEE DDLEADLSSKEEDNLPVPARAAVADWWQRARQDYSRSGRYLGGKPFSGAALLDVLARGPMRRRHVHARDLALRTQGIHDV QTRAFTARQGAELAEAQRVREHLSTRPLKRAFGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46750; Mature: 46618
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLRIDVIEEHFSEAAFLYSQWERALRGANYNLEETAQLEERLLAHLDGLVLGGEPVAE CCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEECCCHHHH ALLSPALDGGEPGEVFCSVFASIAESPPAALEVVLALAPVAPPEVLASLRRALELSGRTG HHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC LDASLVPLLKAPEASVQALALEVLSFRGAVPRGVALKLLDQADGRVVAAALRGLGTLERD CCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH VGHRELRRLLDDNRPQVRLAAIESGLLSGVRAAWDACRQEAQGCGEGAPPARLLQAICGD CCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC DEDVERLVALMANDVVRADIVWALGFTGRVAAVEACLELMGHVPSVARLAGESFSAITGL CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHH VLKDTYAVELEEGDSLPPLEEDDLEADLSSKEEDNLPVPARAAVADWWQRARQDYSRSGR HHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC YLGGKPFSGAALLDVLARGPMRRRHVHARDLALRTQGIHDVQTRAFTARQGAELAEAQRV CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHH REHLSTRPLKRAFGG HHHHHCCHHHHHHCC >Mature Secondary Structure PTLRIDVIEEHFSEAAFLYSQWERALRGANYNLEETAQLEERLLAHLDGLVLGGEPVAE CCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEECCCHHHH ALLSPALDGGEPGEVFCSVFASIAESPPAALEVVLALAPVAPPEVLASLRRALELSGRTG HHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC LDASLVPLLKAPEASVQALALEVLSFRGAVPRGVALKLLDQADGRVVAAALRGLGTLERD CCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH VGHRELRRLLDDNRPQVRLAAIESGLLSGVRAAWDACRQEAQGCGEGAPPARLLQAICGD CCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC DEDVERLVALMANDVVRADIVWALGFTGRVAAVEACLELMGHVPSVARLAGESFSAITGL CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHH VLKDTYAVELEEGDSLPPLEEDDLEADLSSKEEDNLPVPARAAVADWWQRARQDYSRSGR HHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC YLGGKPFSGAALLDVLARGPMRRRHVHARDLALRTQGIHDVQTRAFTARQGAELAEAQRV CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHH REHLSTRPLKRAFGG HHHHHCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA