Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is dnaJ [C]

Identifier: 108758511

GI number: 108758511

Start: 3893830

End: 3895569

Strand: Direct

Name: dnaJ [C]

Synonym: MXAN_3349

Alternate gene names: 108758511

Gene position: 3893830-3895569 (Clockwise)

Preceding gene: 108761220

Following gene: 108762093

Centisome position: 42.6

GC content: 72.13

Gene sequence:

>1740_bases
ATGAAGCCCTTCGAGCAGCAGACCTATTACGAGATTCTCGAAGTCCCCGTCACCGCTCCGAAGGAGGAGATTCGGGCGGC
GTACGAACGGCTGACGGAGCTGTATGCACCGGACTCCATCGCCGTCTATGCGCTCGTGGATGAGGGCCAGGTGGATGAGC
TCCGCACTCGGCTCGCCGAGGCGCTGGAGATTCTCTCCGACGAAGAGCTGCGTGCCGAGTACGACAAGGACCTGGGGCTC
CCGGCCCTCCGGTTGATGGACGCGGTGTCGACCGGGGGCGAGGTGGCACACGCCGCCGCGCCGGTGGAGCAGCGCGCGGA
GCCGGAGCTCGTTGGGGTTGCCGCTTCCGGCGCGGAAGATCAAACTGGCCACCTTTCGACGCAGATCCCCGAAACGGGGA
CGAACGGGAGGACAGGAGCAGTGCGAGACGTGCCGGTGGAGGACTCGGAGACCGCGATGACGGGGCGGGATGGGGAAGGG
GAGGCCGGGGCCCAGGCGACGGAGCCTCGGGTGGAGGCGATGCCGGCGTCCTCGGGACAGGCGGACTTCCGGGCGTCGTT
TTTCCGTGGGTTCTCGTTCGCATACGTGTCCAGCTCGTTGCAGGACACGCAGCGGCTGGGGAGCGCGGTGGATGTTCCCG
TCGCGTCGATTCAGCCTCAGGTTTCGGGTAGTGGCACGGGGGCCGCGAGCGCTGAGTCGCAGCGCGAGGCCCCCGGTGCG
GTGGCTGCGGCTCCGGTGAGTGAGCCGTCCGCGGCGCATGAGGCCGCTGCGGTAGTGCCTGGCGTCGTGGCGGCCAGTGC
AACTGCTTCGGTTTCCCCAGGAGGCCCTGCGGTAACGGGCAGCGCGCCGGCTCCAGCGACGGCTCCCCAGGTCAGCGTCC
CTTCTTCGGGCAGCGACGCCTCGGTGCCTGCCTCGGCCGCCGCGCCGACGCCTGGTCCGGCAGGCGCTGTCAGCGCGCTG
GCTTCGGTCAGCGATGCGCCGGCGCCTGCGACGGCTGCCGTGCCGACGCCCGCCTCGGCCGCCCCCGTCAGCTCCCCGGT
GGCGGAAGGCAGTGCCGCGGTGGCTGCCTCGGCCACTCAGGCCAGCAGCCCAGCCGCCGCGCCGGTCCCCACGCAAGGCG
CTCCGGTCAGCGCCGTGGCGGCTCTGCCCCCTTCGGCGCCTGCCACCGCCGTGACTGGCGCCCCGGCATCGGAAACCAGC
ACTGCGCCCCACCTGCCGGTTCCAGCGAGTGCGAGCCCGGTACCGCCGGCCCCCCAGGCGCCCGAGGCCGAGTCGACCGC
CATCGTCCCTGCCCGTCCGTCGCCCACCTCGGAGGCTCCGTCCGAGCCGGGCCGGGCTGGCGCGCGTCCCGGGCGGCCCC
TGGGAGACGCGCAGCAGATCGCCCAGGACTCCGCCATCGCCACGGCGGAGGCGGCGCTGGCGCAGGCGTCCCAGGCCGCG
TCGCGGGCCCGTGAGCCCCGGCCTCGCGTCCCGGACATCCCGTCCGACGCAGAGTTCAACGGCGAGCTGCTCCGGCAGGT
CCGAGAGGCCCGGGGGGTGACCCTCCAGCAGGTGGCCGACCGCACCCGCATCACGCGCATGCACCTGGAGAACGTCGAGG
CGGACCGCTACAACCTGCTCCCGCCCTCGGTCTACCTGCGAGGTATCCTGATGAGCCTCGCCCGCGAGCTGGGGTTGGAT
CCACTCCGCGTCTCCAAGAGCTACCTGGCCCTGTCTTCTGAGAAGTCAGGCCGGAAGTAG

Upstream 100 bases:

>100_bases
CCGTCCTCATCGAGCGACCGGATTCCGCGGCGGCCACTGCCATTCTGGGCATCGCAACGCGTATCCTCACACTCGACGGC
TCCCCCCAGCGTTCCACACC

Downstream 100 bases:

>100_bases
GGGAGGCGCCCGGAAGTGCTCGGATGTCACCGGCGTTGCGAGGAAAGTTGACTCGCCTCCAGCCGCTGCCTAAGTAGGTA
GCACGATGACGGACGAGGAA

Product: DnaJ domain-containing protein

Products: NA

Alternate protein names: Heat Shock Protein DNAJ Domain Protein; Heat Shock Protein DNAJ Domain-Containing Protein; DNAj Domain Protein

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MKPFEQQTYYEILEVPVTAPKEEIRAAYERLTELYAPDSIAVYALVDEGQVDELRTRLAEALEILSDEELRAEYDKDLGL
PALRLMDAVSTGGEVAHAAAPVEQRAEPELVGVAASGAEDQTGHLSTQIPETGTNGRTGAVRDVPVEDSETAMTGRDGEG
EAGAQATEPRVEAMPASSGQADFRASFFRGFSFAYVSSSLQDTQRLGSAVDVPVASIQPQVSGSGTGAASAESQREAPGA
VAAAPVSEPSAAHEAAAVVPGVVAASATASVSPGGPAVTGSAPAPATAPQVSVPSSGSDASVPASAAAPTPGPAGAVSAL
ASVSDAPAPATAAVPTPASAAPVSSPVAEGSAAVAASATQASSPAAAPVPTQGAPVSAVAALPPSAPATAVTGAPASETS
TAPHLPVPASASPVPPAPQAPEAESTAIVPARPSPTSEAPSEPGRAGARPGRPLGDAQQIAQDSAIATAEAALAQASQAA
SRAREPRPRVPDIPSDAEFNGELLRQVREARGVTLQQVADRTRITRMHLENVEADRYNLLPPSVYLRGILMSLARELGLD
PLRVSKSYLALSSEKSGRK

Sequences:

>Translated_579_residues
MKPFEQQTYYEILEVPVTAPKEEIRAAYERLTELYAPDSIAVYALVDEGQVDELRTRLAEALEILSDEELRAEYDKDLGL
PALRLMDAVSTGGEVAHAAAPVEQRAEPELVGVAASGAEDQTGHLSTQIPETGTNGRTGAVRDVPVEDSETAMTGRDGEG
EAGAQATEPRVEAMPASSGQADFRASFFRGFSFAYVSSSLQDTQRLGSAVDVPVASIQPQVSGSGTGAASAESQREAPGA
VAAAPVSEPSAAHEAAAVVPGVVAASATASVSPGGPAVTGSAPAPATAPQVSVPSSGSDASVPASAAAPTPGPAGAVSAL
ASVSDAPAPATAAVPTPASAAPVSSPVAEGSAAVAASATQASSPAAAPVPTQGAPVSAVAALPPSAPATAVTGAPASETS
TAPHLPVPASASPVPPAPQAPEAESTAIVPARPSPTSEAPSEPGRAGARPGRPLGDAQQIAQDSAIATAEAALAQASQAA
SRAREPRPRVPDIPSDAEFNGELLRQVREARGVTLQQVADRTRITRMHLENVEADRYNLLPPSVYLRGILMSLARELGLD
PLRVSKSYLALSSEKSGRK
>Mature_579_residues
MKPFEQQTYYEILEVPVTAPKEEIRAAYERLTELYAPDSIAVYALVDEGQVDELRTRLAEALEILSDEELRAEYDKDLGL
PALRLMDAVSTGGEVAHAAAPVEQRAEPELVGVAASGAEDQTGHLSTQIPETGTNGRTGAVRDVPVEDSETAMTGRDGEG
EAGAQATEPRVEAMPASSGQADFRASFFRGFSFAYVSSSLQDTQRLGSAVDVPVASIQPQVSGSGTGAASAESQREAPGA
VAAAPVSEPSAAHEAAAVVPGVVAASATASVSPGGPAVTGSAPAPATAPQVSVPSSGSDASVPASAAAPTPGPAGAVSAL
ASVSDAPAPATAAVPTPASAAPVSSPVAEGSAAVAASATQASSPAAAPVPTQGAPVSAVAALPPSAPATAVTGAPASETS
TAPHLPVPASASPVPPAPQAPEAESTAIVPARPSPTSEAPSEPGRAGARPGRPLGDAQQIAQDSAIATAEAALAQASQAA
SRAREPRPRVPDIPSDAEFNGELLRQVREARGVTLQQVADRTRITRMHLENVEADRYNLLPPSVYLRGILMSLARELGLD
PLRVSKSYLALSSEKSGRK

Specific function: Interacts With Dnak To Disassemble A Protein Complex At The Phage Lambda Origin Of Replication. Stimulates, Jointly With Grpe, The Atpase Activity Of Dnak. [C]

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58261; Mature: 58261

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPFEQQTYYEILEVPVTAPKEEIRAAYERLTELYAPDSIAVYALVDEGQVDELRTRLAE
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHH
ALEILSDEELRAEYDKDLGLPALRLMDAVSTGGEVAHAAAPVEQRAEPELVGVAASGAED
HHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHCCHHHCCCCCEEEEECCCCCC
QTGHLSTQIPETGTNGRTGAVRDVPVEDSETAMTGRDGEGEAGAQATEPRVEAMPASSGQ
CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
ADFRASFFRGFSFAYVSSSLQDTQRLGSAVDVPVASIQPQVSGSGTGAASAESQREAPGA
HHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCHHHCCCCC
VAAAPVSEPSAAHEAAAVVPGVVAASATASVSPGGPAVTGSAPAPATAPQVSVPSSGSDA
EEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SVPASAAAPTPGPAGAVSALASVSDAPAPATAAVPTPASAAPVSSPVAEGSAAVAASATQ
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHEECCCC
ASSPAAAPVPTQGAPVSAVAALPPSAPATAVTGAPASETSTAPHLPVPASASPVPPAPQA
CCCCCCCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PEAESTAIVPARPSPTSEAPSEPGRAGARPGRPLGDAQQIAQDSAIATAEAALAQASQAA
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SRAREPRPRVPDIPSDAEFNGELLRQVREARGVTLQQVADRTRITRMHLENVEADRYNLL
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PPSVYLRGILMSLARELGLDPLRVSKSYLALSSEKSGRK
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCC
>Mature Secondary Structure
MKPFEQQTYYEILEVPVTAPKEEIRAAYERLTELYAPDSIAVYALVDEGQVDELRTRLAE
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHH
ALEILSDEELRAEYDKDLGLPALRLMDAVSTGGEVAHAAAPVEQRAEPELVGVAASGAED
HHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHCCHHHCCCCCEEEEECCCCCC
QTGHLSTQIPETGTNGRTGAVRDVPVEDSETAMTGRDGEGEAGAQATEPRVEAMPASSGQ
CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
ADFRASFFRGFSFAYVSSSLQDTQRLGSAVDVPVASIQPQVSGSGTGAASAESQREAPGA
HHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCHHHCCCCC
VAAAPVSEPSAAHEAAAVVPGVVAASATASVSPGGPAVTGSAPAPATAPQVSVPSSGSDA
EEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SVPASAAAPTPGPAGAVSALASVSDAPAPATAAVPTPASAAPVSSPVAEGSAAVAASATQ
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHEECCCC
ASSPAAAPVPTQGAPVSAVAALPPSAPATAVTGAPASETSTAPHLPVPASASPVPPAPQA
CCCCCCCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PEAESTAIVPARPSPTSEAPSEPGRAGARPGRPLGDAQQIAQDSAIATAEAALAQASQAA
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SRAREPRPRVPDIPSDAEFNGELLRQVREARGVTLQQVADRTRITRMHLENVEADRYNLL
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PPSVYLRGILMSLARELGLDPLRVSKSYLALSSEKSGRK
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA