| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is zraS [H]
Identifier: 108758491
GI number: 108758491
Start: 4838064
End: 4840166
Strand: Reverse
Name: zraS [H]
Synonym: MXAN_3974
Alternate gene names: 108758491
Gene position: 4840166-4838064 (Counterclockwise)
Preceding gene: 108762386
Following gene: 108760115
Centisome position: 52.96
GC content: 71.52
Gene sequence:
>2103_bases GTGTTTGGGGCCACGGAGCAGAGCGACTGGATGAAGTTCCTGTGTCTCACCTCTGATGACCGGCATCCCGTGGCGGAGGA GCTGCGGCGCCAGGGCCAGGCCGTGTTCATCACCGCCGACGTGGTGGAAGCCGGCGCGGCGCTGGGGCACGGGCCCGTGG ACGTGCTGGTGGTGGACGCGGCGGACCTGGTGGAGGACGCGCGCTGGCTGGACGCGCTGCGGACGCGGGCCCGTCCCGAG GAGCCGCTGGTGCTGGGGTTGGCGCGGGAAGGCACCGACGCGGCGCTCGAGCCGCTGCTGGCCGCGGGCGTGGACGAGTT CCTGGTGGAGCCCTTCACCCCGGTGCAGGTGCGCTCACGGCGGTTGTTGCTGGAGCGGCGGGTGGCGGCGCGGCGCCAGC GGCGGACGTCCGAGGCGGAGGCGCGGGGCGAGGTGGCGCGGCTGGCCTCCATCATCCAGATGCAGTCGGACGTGGCGATG GCGGGCTACGGGCTCGACGAGCTGATGCGGTTGCTGTGCGAGCGCTCGCGGGTGTTGTGCGGCGCGGACGGCGCGGCGGT GGCGCTGCTGGGGGCGGACACCGACGAGGAGGTGACCTACCTGGTGGCCAGCGGCAGCCTGATGCCCTTCATCGGCTTCC GGCTGAAGGTGGAGGGCAGTCTCACGGGCGCCAGCCTGCTGCAGGGCGAGGTGATGCGCACGGATGACTCGGAGACGGAC GTCCGGGTCAACGTGACGGCGCTGCGCCAGGTGGGCGCGCGGTCGATGATTTGCGTGCCGCTGTGGCGCGAGGGCCGCCC GGTGGGCGTGCTCAACGTCACCAGCCGGCGGCCGAACACGTTCGAGGACCGGGACGTGCGCACGCTGGAGCTGATGGCGG GTCTGCTCGGCGCGGCCATGGGCAACGCGGCCGAGGCCCAGGCGCGTCAGGAGTTGATGGTGCAGAACACGCTGGCGATG GGCGCGCTGGAGGAGTCGCAGGAGCTGTTCGCGTCCTTCATGGACAACATCCCCGCGGTGGCCTTCATGAAGGACGAGCG GGGCCGCCGCATCTGGGTGAACGCGCGCTACAGCCGGTTCTTCGGCTTCCCGGTGGGCGCGGACATGTCCAACGTGTCCG ACGTGGATTTGATGCCCGCGGCCTCCGCCGAGCAGTCGCGCCGGGATGACGACGCGGTGCTGACCTCCGGCAAGCAGAGC ATCACCGAGATGATGGTTCCCGCGCGCGACGGCACCGAGCGCCACTGGCTCACCTACCGCTTCATCGTGCGGGAGCGCTC GGGGCGGCGGCTGCTGGCGGGCGTGGCGGTGGACATCACCGACCGCAAGGCCATGCAGGCGCAGCTCGTGGTGTCGGACC GGCTGGCGGCGGTGGGGACGCTGGCGGCGGGCGTGGCACACGAAATCAACAACCCGCTGGCCTTCGTCCTCTCCAACCTG TCGTTCCTCGCGGGCGAACTGCACGCCCTGGCGCCGGAGTTGCCGTCGGGCCGCATGGCGGAGCTGGAGGAGGTGCTGCG CGAGGCCACCGACGGCGCGCACCGCGTGCGGCAGATCGTCCGGGACTTGAGGACCTTCTCCCGGGGCGACGACGAGGTGG CCACCGCCGTCAACGTGCAGGCGGTGCTCGAGTCGGCCATCACCCTGGCGCGCAGCGAGCTGAAGCTGCGCGCGCAGTTG GTCCGCGACTACTGCGAGGTGCCGCTGGTGGAGGGCAACGAGGGCCGCTTCGGACAGGTGTTCCTCAACCTGCTCATCAA CGCCGCGCAGGCCATTCCGATGGGCCAGACGGAGCAGCACGAGGTCCGGCTGAGCCTGCGAAGCGCAGGGGACCGCGTCA TCATCGAGGTGCGCGACACGGGCGTGGGCATGCCTCCGGAGGTGCGCGCCCGCATCTTCGACCCCTTCTTCACCACCAAG CCGGTGGGCGAGGGCACGGGGCTGGGCCTGTCCATCTGCCACGGCATCGTCACCGGCTTCGGTGGAGACATCTCCGTGGA GAGCGAGGAGGGACGGGGCAGCACCTTCCGCGTCTCCCTGCCGGTGGCACGGCGCGCGAAGGAGCCGGTGGATCCGCCGC TGCGCATGCCCCTGGTGGGCTGA
Upstream 100 bases:
>100_bases GTATGTTTCCACCGGGCATGGGGTGCGCCTGACCCCCGCCAGTCAGGACGCTCCTGGCTGGAAATGCCGTGCTACAGAAT CATAGTATTTTTCACCCCGT
Downstream 100 bases:
>100_bases GGTCAGCGGCGGAACATGGGCGGGAAGACGCGGGGGGCCTTCTTCTTGCGCAGGCAGCGCACGACCGCGTCCATGTAGCA GGCGGAGAAGGCGCGGCGGC
Product: sensory box sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 700; Mature: 700
Protein sequence:
>700_residues MFGATEQSDWMKFLCLTSDDRHPVAEELRRQGQAVFITADVVEAGAALGHGPVDVLVVDAADLVEDARWLDALRTRARPE EPLVLGLAREGTDAALEPLLAAGVDEFLVEPFTPVQVRSRRLLLERRVAARRQRRTSEAEARGEVARLASIIQMQSDVAM AGYGLDELMRLLCERSRVLCGADGAAVALLGADTDEEVTYLVASGSLMPFIGFRLKVEGSLTGASLLQGEVMRTDDSETD VRVNVTALRQVGARSMICVPLWREGRPVGVLNVTSRRPNTFEDRDVRTLELMAGLLGAAMGNAAEAQARQELMVQNTLAM GALEESQELFASFMDNIPAVAFMKDERGRRIWVNARYSRFFGFPVGADMSNVSDVDLMPAASAEQSRRDDDAVLTSGKQS ITEMMVPARDGTERHWLTYRFIVRERSGRRLLAGVAVDITDRKAMQAQLVVSDRLAAVGTLAAGVAHEINNPLAFVLSNL SFLAGELHALAPELPSGRMAELEEVLREATDGAHRVRQIVRDLRTFSRGDDEVATAVNVQAVLESAITLARSELKLRAQL VRDYCEVPLVEGNEGRFGQVFLNLLINAAQAIPMGQTEQHEVRLSLRSAGDRVIIEVRDTGVGMPPEVRARIFDPFFTTK PVGEGTGLGLSICHGIVTGFGGDISVESEEGRGSTFRVSLPVARRAKEPVDPPLRMPLVG
Sequences:
>Translated_700_residues MFGATEQSDWMKFLCLTSDDRHPVAEELRRQGQAVFITADVVEAGAALGHGPVDVLVVDAADLVEDARWLDALRTRARPE EPLVLGLAREGTDAALEPLLAAGVDEFLVEPFTPVQVRSRRLLLERRVAARRQRRTSEAEARGEVARLASIIQMQSDVAM AGYGLDELMRLLCERSRVLCGADGAAVALLGADTDEEVTYLVASGSLMPFIGFRLKVEGSLTGASLLQGEVMRTDDSETD VRVNVTALRQVGARSMICVPLWREGRPVGVLNVTSRRPNTFEDRDVRTLELMAGLLGAAMGNAAEAQARQELMVQNTLAM GALEESQELFASFMDNIPAVAFMKDERGRRIWVNARYSRFFGFPVGADMSNVSDVDLMPAASAEQSRRDDDAVLTSGKQS ITEMMVPARDGTERHWLTYRFIVRERSGRRLLAGVAVDITDRKAMQAQLVVSDRLAAVGTLAAGVAHEINNPLAFVLSNL SFLAGELHALAPELPSGRMAELEEVLREATDGAHRVRQIVRDLRTFSRGDDEVATAVNVQAVLESAITLARSELKLRAQL VRDYCEVPLVEGNEGRFGQVFLNLLINAAQAIPMGQTEQHEVRLSLRSAGDRVIIEVRDTGVGMPPEVRARIFDPFFTTK PVGEGTGLGLSICHGIVTGFGGDISVESEEGRGSTFRVSLPVARRAKEPVDPPLRMPLVG >Mature_700_residues MFGATEQSDWMKFLCLTSDDRHPVAEELRRQGQAVFITADVVEAGAALGHGPVDVLVVDAADLVEDARWLDALRTRARPE EPLVLGLAREGTDAALEPLLAAGVDEFLVEPFTPVQVRSRRLLLERRVAARRQRRTSEAEARGEVARLASIIQMQSDVAM AGYGLDELMRLLCERSRVLCGADGAAVALLGADTDEEVTYLVASGSLMPFIGFRLKVEGSLTGASLLQGEVMRTDDSETD VRVNVTALRQVGARSMICVPLWREGRPVGVLNVTSRRPNTFEDRDVRTLELMAGLLGAAMGNAAEAQARQELMVQNTLAM GALEESQELFASFMDNIPAVAFMKDERGRRIWVNARYSRFFGFPVGADMSNVSDVDLMPAASAEQSRRDDDAVLTSGKQS ITEMMVPARDGTERHWLTYRFIVRERSGRRLLAGVAVDITDRKAMQAQLVVSDRLAAVGTLAAGVAHEINNPLAFVLSNL SFLAGELHALAPELPSGRMAELEEVLREATDGAHRVRQIVRDLRTFSRGDDEVATAVNVQAVLESAITLARSELKLRAQL VRDYCEVPLVEGNEGRFGQVFLNLLINAAQAIPMGQTEQHEVRLSLRSAGDRVIIEVRDTGVGMPPEVRARIFDPFFTTK PVGEGTGLGLSICHGIVTGFGGDISVESEEGRGSTFRVSLPVARRAKEPVDPPLRMPLVG
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=251, Percent_Identity=35.4581673306773, Blast_Score=125, Evalue=1e-29, Organism=Escherichia coli, GI1788549, Length=256, Percent_Identity=30.859375, Blast_Score=113, Evalue=5e-26, Organism=Escherichia coli, GI145693157, Length=266, Percent_Identity=32.3308270676692, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI48994928, Length=398, Percent_Identity=24.6231155778894, Blast_Score=86, Evalue=1e-17, Organism=Escherichia coli, GI1790300, Length=256, Percent_Identity=31.25, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI87081816, Length=275, Percent_Identity=29.8181818181818, Blast_Score=80, Evalue=6e-16, Organism=Escherichia coli, GI1786783, Length=244, Percent_Identity=26.2295081967213, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1789149, Length=266, Percent_Identity=26.6917293233083, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1786912, Length=337, Percent_Identity=24.3323442136499, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI87082128, Length=284, Percent_Identity=26.4084507042254, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 76316; Mature: 76316
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS50112 PAS ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGATEQSDWMKFLCLTSDDRHPVAEELRRQGQAVFITADVVEAGAALGHGPVDVLVVDA CCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEHHHHHHCHHCCCCCEEEEEECH ADLVEDARWLDALRTRARPEEPLVLGLAREGTDAALEPLLAAGVDEFLVEPFTPVQVRSR HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCHHHHHCCCCCHHHHHH RLLLERRVAARRQRRTSEAEARGEVARLASIIQMQSDVAMAGYGLDELMRLLCERSRVLC HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCEEE GADGAAVALLGADTDEEVTYLVASGSLMPFIGFRLKVEGSLTGASLLQGEVMRTDDSETD CCCCCEEEEEECCCCCCEEEEEECCCCCEEECEEEEEECCCCCHHHHCCCCEECCCCCCC VRVNVTALRQVGARSMICVPLWREGRPVGVLNVTSRRPNTFEDRDVRTLELMAGLLGAAM EEEEHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHC GNAAEAQARQELMVQNTLAMGALEESQELFASFMDNIPAVAFMKDERGRRIWVNARYSRF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEHHE FGFPVGADMSNVSDVDLMPAASAEQSRRDDDAVLTSGKQSITEMMVPARDGTERHWLTYR ECCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHCCHHHHHHHHCCCCCCCCCCEEEEE FIVRERSGRRLLAGVAVDITDRKAMQAQLVVSDRLAAVGTLAAGVAHEINNPLAFVLSNL EEEECCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SFLAGELHALAPELPSGRMAELEEVLREATDGAHRVRQIVRDLRTFSRGDDEVATAVNVQ HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH AVLESAITLARSELKLRAQLVRDYCEVPLVEGNEGRFGQVFLNLLINAAQAIPMGQTEQH HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHH EVRLSLRSAGDRVIIEVRDTGVGMPPEVRARIFDPFFTTKPVGEGTGLGLSICHGIVTGF HHEEEEECCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCC GGDISVESEEGRGSTFRVSLPVARRAKEPVDPPLRMPLVG CCCEEEECCCCCCCEEEEECCHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MFGATEQSDWMKFLCLTSDDRHPVAEELRRQGQAVFITADVVEAGAALGHGPVDVLVVDA CCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEHHHHHHCHHCCCCCEEEEEECH ADLVEDARWLDALRTRARPEEPLVLGLAREGTDAALEPLLAAGVDEFLVEPFTPVQVRSR HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCHHHHHCCCCCHHHHHH RLLLERRVAARRQRRTSEAEARGEVARLASIIQMQSDVAMAGYGLDELMRLLCERSRVLC HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCEEE GADGAAVALLGADTDEEVTYLVASGSLMPFIGFRLKVEGSLTGASLLQGEVMRTDDSETD CCCCCEEEEEECCCCCCEEEEEECCCCCEEECEEEEEECCCCCHHHHCCCCEECCCCCCC VRVNVTALRQVGARSMICVPLWREGRPVGVLNVTSRRPNTFEDRDVRTLELMAGLLGAAM EEEEHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHC GNAAEAQARQELMVQNTLAMGALEESQELFASFMDNIPAVAFMKDERGRRIWVNARYSRF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEHHE FGFPVGADMSNVSDVDLMPAASAEQSRRDDDAVLTSGKQSITEMMVPARDGTERHWLTYR ECCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHCCHHHHHHHHCCCCCCCCCCEEEEE FIVRERSGRRLLAGVAVDITDRKAMQAQLVVSDRLAAVGTLAAGVAHEINNPLAFVLSNL EEEECCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SFLAGELHALAPELPSGRMAELEEVLREATDGAHRVRQIVRDLRTFSRGDDEVATAVNVQ HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH AVLESAITLARSELKLRAQLVRDYCEVPLVEGNEGRFGQVFLNLLINAAQAIPMGQTEQH HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHH EVRLSLRSAGDRVIIEVRDTGVGMPPEVRARIFDPFFTTKPVGEGTGLGLSICHGIVTGF HHEEEEECCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCC GGDISVESEEGRGSTFRVSLPVARRAKEPVDPPLRMPLVG CCCEEEECCCCCCCEEEEECCHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]