BacMap

Definition	Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession	NC_008095
Length	9,139,763

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The map label for this gene is 108758490

Identifier: 108758490

GI number: 108758490

Start: 2501015

End: 2502175

Strand: Reverse

Name: 108758490

Synonym: MXAN_2162

Alternate gene names: NA

Gene position: 2502175-2501015 (Counterclockwise)

Preceding gene: 108759771

Following gene: 108759449

Centisome position: 27.38

GC content: 68.65

Gene sequence:

>1161_bases
ATGAAGCTCGACAAGCCCGAGAACCTGTTCGCTGCCATCGAGCAGTGCGATGTCTTCGCGGTGGAGGACCTGCTGGCCAA
AGGGGCCGACCCCGATGAAGTCGACCTCGACGGCTACCAGGCCACGCCGTTGGCGTATGCCTGCAGTCACGGTGACGAGG
CTGCCGTGCGCGCGCTGCTGGACGCGAAGGCCGCCCCGGATGCAGCGGCCTTCCAGCCGCCGCTGGTCGCGGCCACTGCG
CATGGCTTTGCCGCTCTTGTGAGCTTGCTGGTGAAGGCCGGCGCGGATGTGAACGCGGGGGACGAAACCGGCGCCAGCGC
GCTGTGGACGGCCGCCGCGAATGGCTTTGCCGACATCGCACGATGCCTGGTGGAAGCCGGCGCGGATCGCGAACAGGCGG
ACAACGACGGCAAGTTGCCCTCCATCGTGGCGTTGGAGAATGGCCATGTCGCGCTGTCGAACTACCTGAGCGATCCGGCG
AGCTACCCGGCCACGCATTCCTTCTGGCGCGGCAGCAAGAAGGCTGCGCGGCAGGCGGCGGAGGCACGGCGCGCACAGGT
TGTCGACAGGGCCACGGGCAAGGACGTCCGTGGCGCTGCCGCTGCCGAACCCGAATGGACGTTCTCCGGCGGCATTGCCC
GCAGCCCGTGGGCAACCCAGGACTTCCCTTCGGTGGCCGCTGCCGGCAACCTCGAACTGGTGGGGCGGATGCTGGACGCC
GGCCTCGACCCCGACTGGACCCAGTTCAAGGGCAACCCGACGGCGCTGATGCTGGCCGCGCGCAGTGGCGAACTGGGTGC
GGTGGACCTCCTGCTCGCACGCAGAGCCAAGGTGAACCACCGAACGGACAAGGGACTCACCGCGCTGCACATGGCGCTGT
TCAAACCGTCGGCACGCGTGCACGGCCCCATCATTCGCAGCCTCTTGGCCGCGGGTGCCGATCCCAACGTGCCCGACGAT
GAAGGACAACGACCGCTACAGCGCGCGCTGGCGCATGCGATGCCAACGCTCGTGCAGGCATTGATCGAAGCCGGTGCCGA
CCCGTTCATTCGCGACCGCGCCGGCCGCATGCCCGCCGACTGGGCGCCAACCGATGGCAAGCACGCCGATGCCATCCGCG
AGTTGCTGGAGACGGCGCGCAAGGGACGGACGGACGGCTGA

Upstream 100 bases:

>100_bases
CGACTCACGGCTCCTCCGGCTTCCGCCAGGGTCGGCGGAGTAGATAGGCTGCGATGCTGCGGCGTCCAGCCCAACACCAC
GCATCCATCAGGTAGCGCTC

Downstream 100 bases:

>100_bases
GCGACCGCACCCATCCCCTATCCCACGGTGGAGCCAGGGGATAGGGGATGGGCCGTCTGAAGCATGCAGCGAAGGTTGCT
CACCGCGACAGCCTGGCGGA

Product: ankyrin repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKLDKPENLFAAIEQCDVFAVEDLLAKGADPDEVDLDGYQATPLAYACSHGDEAAVRALLDAKAAPDAAAFQPPLVAATA
HGFAALVSLLVKAGADVNAGDETGASALWTAAANGFADIARCLVEAGADREQADNDGKLPSIVALENGHVALSNYLSDPA
SYPATHSFWRGSKKAARQAAEARRAQVVDRATGKDVRGAAAAEPEWTFSGGIARSPWATQDFPSVAAAGNLELVGRMLDA
GLDPDWTQFKGNPTALMLAARSGELGAVDLLLARRAKVNHRTDKGLTALHMALFKPSARVHGPIIRSLLAAGADPNVPDD
EGQRPLQRALAHAMPTLVQALIEAGADPFIRDRAGRMPADWAPTDGKHADAIRELLETARKGRTDG

Sequences:

>Translated_386_residues
MKLDKPENLFAAIEQCDVFAVEDLLAKGADPDEVDLDGYQATPLAYACSHGDEAAVRALLDAKAAPDAAAFQPPLVAATA
HGFAALVSLLVKAGADVNAGDETGASALWTAAANGFADIARCLVEAGADREQADNDGKLPSIVALENGHVALSNYLSDPA
SYPATHSFWRGSKKAARQAAEARRAQVVDRATGKDVRGAAAAEPEWTFSGGIARSPWATQDFPSVAAAGNLELVGRMLDA
GLDPDWTQFKGNPTALMLAARSGELGAVDLLLARRAKVNHRTDKGLTALHMALFKPSARVHGPIIRSLLAAGADPNVPDD
EGQRPLQRALAHAMPTLVQALIEAGADPFIRDRAGRMPADWAPTDGKHADAIRELLETARKGRTDG
>Mature_386_residues
MKLDKPENLFAAIEQCDVFAVEDLLAKGADPDEVDLDGYQATPLAYACSHGDEAAVRALLDAKAAPDAAAFQPPLVAATA
HGFAALVSLLVKAGADVNAGDETGASALWTAAANGFADIARCLVEAGADREQADNDGKLPSIVALENGHVALSNYLSDPA
SYPATHSFWRGSKKAARQAAEARRAQVVDRATGKDVRGAAAAEPEWTFSGGIARSPWATQDFPSVAAAGNLELVGRMLDA
GLDPDWTQFKGNPTALMLAARSGELGAVDLLLARRAKVNHRTDKGLTALHMALFKPSARVHGPIIRSLLAAGADPNVPDD
EGQRPLQRALAHAMPTLVQALIEAGADPFIRDRAGRMPADWAPTDGKHADAIRELLETARKGRTDG

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 18 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI24233530, Length=326, Percent_Identity=29.1411042944785, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI268607595, Length=375, Percent_Identity=28.5333333333333, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI188595682, Length=364, Percent_Identity=26.3736263736264, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI52426737, Length=364, Percent_Identity=26.3736263736264, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI62988328, Length=375, Percent_Identity=28.5333333333333, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI46519151, Length=384, Percent_Identity=28.90625, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI46519154, Length=388, Percent_Identity=28.8659793814433, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI46519147, Length=391, Percent_Identity=27.8772378516624, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI37620163, Length=391, Percent_Identity=27.8772378516624, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI52426735, Length=383, Percent_Identity=25.8485639686684, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI38683816, Length=400, Percent_Identity=27.75, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI38683807, Length=400, Percent_Identity=27.75, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI68131557, Length=389, Percent_Identity=28.2776349614396, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI157739945, Length=325, Percent_Identity=27.6923076923077, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI30425444, Length=359, Percent_Identity=28.9693593314763, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI32967601, Length=328, Percent_Identity=27.1341463414634, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI13376842, Length=320, Percent_Identity=29.6875, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI55741641, Length=306, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI18640738, Length=144, Percent_Identity=36.8055555555556, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI225543463, Length=310, Percent_Identity=28.3870967741935, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI157743284, Length=370, Percent_Identity=28.6486486486486, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI225543461, Length=310, Percent_Identity=28.3870967741935, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI7705748, Length=264, Percent_Identity=28.030303030303, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI163914396, Length=264, Percent_Identity=28.030303030303, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI96975023, Length=358, Percent_Identity=26.536312849162, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI239742602, Length=306, Percent_Identity=23.5294117647059, Blast_Score=66, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71981389, Length=360, Percent_Identity=28.0555555555556, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI25145251, Length=360, Percent_Identity=28.0555555555556, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17542700, Length=360, Percent_Identity=28.0555555555556, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71981414, Length=360, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71981411, Length=360, Percent_Identity=28.3333333333333, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI161082089, Length=407, Percent_Identity=26.044226044226, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI161082092, Length=407, Percent_Identity=26.044226044226, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI161082085, Length=388, Percent_Identity=26.0309278350515, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI161082099, Length=388, Percent_Identity=26.0309278350515, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI161082110, Length=388, Percent_Identity=26.0309278350515, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI161082096, Length=388, Percent_Identity=26.0309278350515, Blast_Score=79, Evalue=8e-15,
Organism=Drosophila melanogaster, GI161082081, Length=388, Percent_Identity=26.0309278350515, Blast_Score=78, Evalue=9e-15,
Organism=Drosophila melanogaster, GI161082106, Length=388, Percent_Identity=26.0309278350515, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24650843, Length=398, Percent_Identity=26.6331658291457, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI221330482, Length=333, Percent_Identity=28.8288288288288, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI221330474, Length=333, Percent_Identity=28.8288288288288, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI221330480, Length=333, Percent_Identity=28.8288288288288, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI221330478, Length=343, Percent_Identity=27.9883381924198, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281363919, Length=333, Percent_Identity=28.8288288288288, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28573593, Length=333, Percent_Identity=28.8288288288288, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI221330476, Length=333, Percent_Identity=28.8288288288288, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24663095, Length=342, Percent_Identity=28.9473684210526, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21357681, Length=342, Percent_Identity=28.9473684210526, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI45550479, Length=333, Percent_Identity=28.8288288288288, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI45551135, Length=333, Percent_Identity=28.8288288288288, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24663091, Length=342, Percent_Identity=28.9473684210526, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24663102, Length=342, Percent_Identity=28.9473684210526, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24663106, Length=342, Percent_Identity=28.9473684210526, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI28571867, Length=313, Percent_Identity=29.073482428115, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI28571865, Length=313, Percent_Identity=29.073482428115, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24581260, Length=295, Percent_Identity=27.4576271186441, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581258, Length=295, Percent_Identity=27.4576271186441, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI17998549, Length=288, Percent_Identity=27.4305555555556, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI45552223, Length=288, Percent_Identity=27.4305555555556, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI221472807, Length=288, Percent_Identity=27.4305555555556, Blast_Score=66, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR007685 [H]

Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]

EC number: NA

Molecular weight: Translated: 40479; Mature: 40479

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDKPENLFAAIEQCDVFAVEDLLAKGADPDEVDLDGYQATPLAYACSHGDEAAVRALL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHH
DAKAAPDAAAFQPPLVAATAHGFAALVSLLVKAGADVNAGDETGASALWTAAANGFADIA
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHH
RCLVEAGADREQADNDGKLPSIVALENGHVALSNYLSDPASYPATHSFWRGSKKAARQAA
HHHHHCCCCHHHCCCCCCCCEEEEECCCCEEHHHHHCCCCCCCCHHHHHCCHHHHHHHHH
EARRAQVVDRATGKDVRGAAAAEPEWTFSGGIARSPWATQDFPSVAAAGNLELVGRMLDA
HHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHC
GLDPDWTQFKGNPTALMLAARSGELGAVDLLLARRAKVNHRTDKGLTALHMALFKPSARV
CCCCCHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHH
HGPIIRSLLAAGADPNVPDDEGQRPLQRALAHAMPTLVQALIEAGADPFIRDRAGRMPAD
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCC
WAPTDGKHADAIRELLETARKGRTDG
CCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKLDKPENLFAAIEQCDVFAVEDLLAKGADPDEVDLDGYQATPLAYACSHGDEAAVRALL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHH
DAKAAPDAAAFQPPLVAATAHGFAALVSLLVKAGADVNAGDETGASALWTAAANGFADIA
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHH
RCLVEAGADREQADNDGKLPSIVALENGHVALSNYLSDPASYPATHSFWRGSKKAARQAA
HHHHHCCCCHHHCCCCCCCCEEEEECCCCEEHHHHHCCCCCCCCHHHHHCCHHHHHHHHH
EARRAQVVDRATGKDVRGAAAAEPEWTFSGGIARSPWATQDFPSVAAAGNLELVGRMLDA
HHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHC
GLDPDWTQFKGNPTALMLAARSGELGAVDLLLARRAKVNHRTDKGLTALHMALFKPSARV
CCCCCHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHH
HGPIIRSLLAAGADPNVPDDEGQRPLQRALAHAMPTLVQALIEAGADPFIRDRAGRMPAD
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCC
WAPTDGKHADAIRELLETARKGRTDG
CCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA