| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is hflK [H]
Identifier: 108758403
GI number: 108758403
Start: 3715492
End: 3716562
Strand: Direct
Name: hflK [H]
Synonym: MXAN_3171
Alternate gene names: 108758403
Gene position: 3715492-3716562 (Clockwise)
Preceding gene: 108760105
Following gene: 108763305
Centisome position: 40.65
GC content: 66.67
Gene sequence:
>1071_bases ATGTCATGGAATCCTCGCGTCATGAATTCCGACCCACGAGGGCGGGACCCGTCAGACGTCCTACGTGAGCTTCGGCGGCA ACTGGGGCCTGGAATCGGGCGCCGCATCCTGTTCGCGGTGCTCGGCCTGTTCCTGCTGGTGGGGCTGATGACCAGCTACG CCCAGGTGGAGCCGGACGAAGTGGGCGTCATCCTCCGGCTGGGGCGCTTCGTGGGAACGGTGGAGCCGGGCCCGCATTTC CGGATGCCCTTCTGGGTGGACCGCATCGTGAAGGTCCCGGTGCAGCGTCAGCTCAAGGCGGAGTTCGGATTCCGCACGGA GGCCTCCCGCTCGCGCATGGGCTCTGCCTATGCGGCGGAGTCATCGGACACGAAGCGCGAGTCGCTCATGCTCACCGGTG ACCTCAACGTCGCGGTGGTGGAGTGGATCGTCCAGTACAAGATCAAGGACCCGTACAAGTATCTCTTCAAGGTGAAGAAC GTGGAGAGCATGCTTCGGGACATCTCCGAGGCCTCGATGCGGGCCGTCGTGGGAGACCACTCGGTGAATGAGGTCCTCAC CACGGGCCGCCAGGCGGTGGCCACCCAGGCCAAGCTGCTGCTCCAGGACCTGGCGGACCGCTACGAGACGGGCGTGGACA TCCAGCAGGTGGTCCTCCAGGACGTGAACCCGCCCGACCCGGTGAAGCCGTCCTTCAACGAGGTGAACCAGGCCATCCAG GAGAAGGAGCGCGTCATCAACGAGGCCTATGCCGAGCTGAACCGCGTCATCCCCCGCGCGAAGGGCGAGGCCGAGGAGGC GCTGCGCAGCGCCGAGGGCTATGCCATTGAGCGTGTGAACCGCGCCAAGGGGGAGGCGGACCGCTTCGCTCGCGTCTACG AGGAGTACCGCAAGGCGCCGGACGTCACCCGCCGCCGCATGTACCTGGAGACCGTGAGCCAGGTGCTCCGGAGCGCCGGG CAGAAGGTCGTCTTGGATGAGTCCGTCAAGGGGCTCACGCCGCTGTTGAACATGCAGGCGACCGACCCCGCGGTGTCCGG GAGCGCGAGCCAGACGGAGGGCCGCCGATGA
Upstream 100 bases:
>100_bases CATACCGGTCAAGCGCGTGAGCGCTGCGCATGGTGCCCGGCTGGCTGGAATTCTCGTGGCGCCCCTTGCATGAGCAGCCT GTACGGGGGAAGACGGATGG
Downstream 100 bases:
>100_bases GCCGCCTTGTCATTCCCCTTGGCGTATTGGCCGTCCTGGCCGTGGTGCTGGGCTTCTCCGCGACCTACACCCTGAGCGAG CACGAGCAGGCCGTCATCAC
Product: HflK protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSWNPRVMNSDPRGRDPSDVLRELRRQLGPGIGRRILFAVLGLFLLVGLMTSYAQVEPDEVGVILRLGRFVGTVEPGPHF RMPFWVDRIVKVPVQRQLKAEFGFRTEASRSRMGSAYAAESSDTKRESLMLTGDLNVAVVEWIVQYKIKDPYKYLFKVKN VESMLRDISEASMRAVVGDHSVNEVLTTGRQAVATQAKLLLQDLADRYETGVDIQQVVLQDVNPPDPVKPSFNEVNQAIQ EKERVINEAYAELNRVIPRAKGEAEEALRSAEGYAIERVNRAKGEADRFARVYEEYRKAPDVTRRRMYLETVSQVLRSAG QKVVLDESVKGLTPLLNMQATDPAVSGSASQTEGRR
Sequences:
>Translated_356_residues MSWNPRVMNSDPRGRDPSDVLRELRRQLGPGIGRRILFAVLGLFLLVGLMTSYAQVEPDEVGVILRLGRFVGTVEPGPHF RMPFWVDRIVKVPVQRQLKAEFGFRTEASRSRMGSAYAAESSDTKRESLMLTGDLNVAVVEWIVQYKIKDPYKYLFKVKN VESMLRDISEASMRAVVGDHSVNEVLTTGRQAVATQAKLLLQDLADRYETGVDIQQVVLQDVNPPDPVKPSFNEVNQAIQ EKERVINEAYAELNRVIPRAKGEAEEALRSAEGYAIERVNRAKGEADRFARVYEEYRKAPDVTRRRMYLETVSQVLRSAG QKVVLDESVKGLTPLLNMQATDPAVSGSASQTEGRR >Mature_355_residues SWNPRVMNSDPRGRDPSDVLRELRRQLGPGIGRRILFAVLGLFLLVGLMTSYAQVEPDEVGVILRLGRFVGTVEPGPHFR MPFWVDRIVKVPVQRQLKAEFGFRTEASRSRMGSAYAAESSDTKRESLMLTGDLNVAVVEWIVQYKIKDPYKYLFKVKNV ESMLRDISEASMRAVVGDHSVNEVLTTGRQAVATQAKLLLQDLADRYETGVDIQQVVLQDVNPPDPVKPSFNEVNQAIQE KERVINEAYAELNRVIPRAKGEAEEALRSAEGYAIERVNRAKGEADRFARVYEEYRKAPDVTRRRMYLETVSQVLRSAGQ KVVLDESVKGLTPLLNMQATDPAVSGSASQTEGRR
Specific function: HflC and HflK could encode or regulate a protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=278, Percent_Identity=31.6546762589928, Blast_Score=149, Evalue=3e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 40036; Mature: 39905
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWNPRVMNSDPRGRDPSDVLRELRRQLGPGIGRRILFAVLGLFLLVGLMTSYAQVEPDE CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VGVILRLGRFVGTVEPGPHFRMPFWVDRIVKVPVQRQLKAEFGFRTEASRSRMGSAYAAE HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHCCCHHCCC SSDTKRESLMLTGDLNVAVVEWIVQYKIKDPYKYLFKVKNVESMLRDISEASMRAVVGDH CCCCHHHHEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SVNEVLTTGRQAVATQAKLLLQDLADRYETGVDIQQVVLQDVNPPDPVKPSFNEVNQAIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHH EKERVINEAYAELNRVIPRAKGEAEEALRSAEGYAIERVNRAKGEADRFARVYEEYRKAP HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCC DVTRRRMYLETVSQVLRSAGQKVVLDESVKGLTPLLNMQATDPAVSGSASQTEGRR HHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SWNPRVMNSDPRGRDPSDVLRELRRQLGPGIGRRILFAVLGLFLLVGLMTSYAQVEPDE CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VGVILRLGRFVGTVEPGPHFRMPFWVDRIVKVPVQRQLKAEFGFRTEASRSRMGSAYAAE HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHCCCHHCCC SSDTKRESLMLTGDLNVAVVEWIVQYKIKDPYKYLFKVKNVESMLRDISEASMRAVVGDH CCCCHHHHEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SVNEVLTTGRQAVATQAKLLLQDLADRYETGVDIQQVVLQDVNPPDPVKPSFNEVNQAIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHH EKERVINEAYAELNRVIPRAKGEAEEALRSAEGYAIERVNRAKGEADRFARVYEEYRKAP HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCC DVTRRRMYLETVSQVLRSAGQKVVLDESVKGLTPLLNMQATDPAVSGSASQTEGRR HHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]