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The map label for this gene is 108758369

Identifier: 108758369

GI number: 108758369

Start: 777865

End: 779100

Strand: Direct

Name: 108758369

Synonym: MXAN_0681

Alternate gene names: NA

Gene position: 777865-779100 (Clockwise)

Preceding gene: 108759972

Following gene: 108762142

Centisome position: 8.51

GC content: 72.49

Gene sequence:

>1236_bases
ATGATGGACACCTCCTCCATTCTCGAACGGGCGCACCGTGAGGATTACGGGCGCATCGTGGCCACGCTCATCCGCGTGCT
GGACGGCGACTTCGGCGCGGCGGAGGAGGTGGTGCAGGACGCCTTCGCCGCGGCCTTGAATCAGTGGCCGCGCGAGGGTG
TGCCGCGCGAGCCGGCCGGTTGGCTGATGCGTGTCGCGCGCAACAAGGCGGTGGACCGCATGCGGCGGTCCGCTCGCCTG
GAGGCGCGCGTGGGCGAGTTGGAGGCGGTGGCGCCATCCGTGGACGACGCCGAATGGCAGACGTTGCCGGACGACTCGCT
GCGGTTGCTCTTCACCTGCTGTCACCCCGCCTTGTCACCCGAGGCCCAGGTGGCGCTCGCGCTTCGTTGTCTGTGTGGGT
TGACGACGGAGCAGATCGCCCGCGCCTTCATCGTGTCGCCCGCCACGCTGGCCCAGCGGCTGGTGCGCGCGCAGCGGAAG
ATACGCACCGCGCGCATCCCCTACGTCATCCCGGAGCCCGAGGCGCTGGCGGAGCGCACCGAGGGCGTGCTGCACACGCT
CTACCTCGTCTTCTCGGAGGGCTACGCGGCCACGGACGGGCCGGCGTTGCTGCGAGTGGACCTTTGCGAAGAGGCCCTGC
GCCTGGCCCGGCTGGCGCGCTCGCTGCTCCCAGGCGACGCGGAGGTGGCGTCCCTGCGGGCGTTGATGCTGCTTCACCAC
TCCCGCCGCCGGGCACGCGTGGCGGCGGATGGCGGGCTGGTGCTGCTGGACCGGCAGGACCGTTCGCTCTGGGATGGCGC
GCAGCGGGACGAAGGACTGGCGGAGCTGGGAGCCGCGCTCGCCATGGGGGCTCGGGGGCCGTACACGGTGCAGGCGGCCA
TCGCGGCGCTGCATGCCCAGGCTCCGCGCGCCGAGGACACCGACTGGGCGCAGATTGCCGCGCTGTATGCGCGGCTGGTG
GTGCTGACGCCGGGGCCCGTGGTGGCGCTCAACCATGCTGCCGCCGTGGCGATGGCCCGCGGCCCCGAGCACGGATTGTC
CCTGGTGGATGACCTGGAGGCCTCCGGACGGCTGGCGGACTACCACCTGCTGCCGGCCGCGCGCGCGGACCTGCTCCGGC
GTCTGGGGCGCAAGGACGAGGCCGCGAGTGCCTACCGGCGGGCACTGGCAATGGTCCGCACCGCGCCCGAGCGGCGTTTC
CTGGAAGCGCGGCTTCTCGAACTGCTGGCGGAGTGA

Upstream 100 bases:

>100_bases
CATCGCGTCTCGCATTCCCAGCGCGCGCAGCGGCTCCATCGAGGTGCGGCCGGTGCGGGAATTCGCCAGGCCCCAGGACT
GACGCCGGCTCCCGCGCGGC

Downstream 100 bases:

>100_bases
AGGCGCCCACGCTGGCTTCTCGGTGGGAGCGACAGCGCCTGAGTCAGTCCTCTGTCGATGACGAAGGAGGCACCCGTTCG
ATGGTGGCGAGCCAGGCCTG

Product: ECF subfamily RNA polymerase sigma factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MMDTSSILERAHREDYGRIVATLIRVLDGDFGAAEEVVQDAFAAALNQWPREGVPREPAGWLMRVARNKAVDRMRRSARL
EARVGELEAVAPSVDDAEWQTLPDDSLRLLFTCCHPALSPEAQVALALRCLCGLTTEQIARAFIVSPATLAQRLVRAQRK
IRTARIPYVIPEPEALAERTEGVLHTLYLVFSEGYAATDGPALLRVDLCEEALRLARLARSLLPGDAEVASLRALMLLHH
SRRRARVAADGGLVLLDRQDRSLWDGAQRDEGLAELGAALAMGARGPYTVQAAIAALHAQAPRAEDTDWAQIAALYARLV
VLTPGPVVALNHAAAVAMARGPEHGLSLVDDLEASGRLADYHLLPAARADLLRRLGRKDEAASAYRRALAMVRTAPERRF
LEARLLELLAE

Sequences:

>Translated_411_residues
MMDTSSILERAHREDYGRIVATLIRVLDGDFGAAEEVVQDAFAAALNQWPREGVPREPAGWLMRVARNKAVDRMRRSARL
EARVGELEAVAPSVDDAEWQTLPDDSLRLLFTCCHPALSPEAQVALALRCLCGLTTEQIARAFIVSPATLAQRLVRAQRK
IRTARIPYVIPEPEALAERTEGVLHTLYLVFSEGYAATDGPALLRVDLCEEALRLARLARSLLPGDAEVASLRALMLLHH
SRRRARVAADGGLVLLDRQDRSLWDGAQRDEGLAELGAALAMGARGPYTVQAAIAALHAQAPRAEDTDWAQIAALYARLV
VLTPGPVVALNHAAAVAMARGPEHGLSLVDDLEASGRLADYHLLPAARADLLRRLGRKDEAASAYRRALAMVRTAPERRF
LEARLLELLAE
>Mature_411_residues
MMDTSSILERAHREDYGRIVATLIRVLDGDFGAAEEVVQDAFAAALNQWPREGVPREPAGWLMRVARNKAVDRMRRSARL
EARVGELEAVAPSVDDAEWQTLPDDSLRLLFTCCHPALSPEAQVALALRCLCGLTTEQIARAFIVSPATLAQRLVRAQRK
IRTARIPYVIPEPEALAERTEGVLHTLYLVFSEGYAATDGPALLRVDLCEEALRLARLARSLLPGDAEVASLRALMLLHH
SRRRARVAADGGLVLLDRQDRSLWDGAQRDEGLAELGAALAMGARGPYTVQAAIAALHAQAPRAEDTDWAQIAALYARLV
VLTPGPVVALNHAAAVAMARGPEHGLSLVDDLEASGRLADYHLLPAARADLLRRLGRKDEAASAYRRALAMVRTAPERRF
LEARLLELLAE

Specific function: Unknown

COG id: COG4941

COG function: function code K; Predicted RNA polymerase sigma factor containing a TPR repeat domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008940
- InterPro:   IPR014284
- InterPro:   IPR007627
- InterPro:   IPR013249
- InterPro:   IPR013325
- InterPro:   IPR013324 [H]

Pfam domain/function: PF04542 Sigma70_r2; PF08281 Sigma70_r4_2 [H]

EC number: NA

Molecular weight: Translated: 44895; Mature: 44895

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00622 HTH_LUXR_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDTSSILERAHREDYGRIVATLIRVLDGDFGAAEEVVQDAFAAALNQWPREGVPREPAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHH
WLMRVARNKAVDRMRRSARLEARVGELEAVAPSVDDAEWQTLPDDSLRLLFTCCHPALSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
EAQVALALRCLCGLTTEQIARAFIVSPATLAQRLVRAQRKIRTARIPYVIPEPEALAERT
HHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHH
EGVLHTLYLVFSEGYAATDGPALLRVDLCEEALRLARLARSLLPGDAEVASLRALMLLHH
HHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SRRRARVAADGGLVLLDRQDRSLWDGAQRDEGLAELGAALAMGARGPYTVQAAIAALHAQ
HHHHHHEECCCCEEEEECCCCCHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHC
APRAEDTDWAQIAALYARLVVLTPGPVVALNHAAAVAMARGPEHGLSLVDDLEASGRLAD
CCCCCCCHHHHHHHHHHHHHEECCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHCCCCCCC
YHLLPAARADLLRRLGRKDEAASAYRRALAMVRTAPERRFLEARLLELLAE
EECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMDTSSILERAHREDYGRIVATLIRVLDGDFGAAEEVVQDAFAAALNQWPREGVPREPAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHH
WLMRVARNKAVDRMRRSARLEARVGELEAVAPSVDDAEWQTLPDDSLRLLFTCCHPALSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
EAQVALALRCLCGLTTEQIARAFIVSPATLAQRLVRAQRKIRTARIPYVIPEPEALAERT
HHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHH
EGVLHTLYLVFSEGYAATDGPALLRVDLCEEALRLARLARSLLPGDAEVASLRALMLLHH
HHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SRRRARVAADGGLVLLDRQDRSLWDGAQRDEGLAELGAALAMGARGPYTVQAAIAALHAQ
HHHHHHEECCCCEEEEECCCCCHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHC
APRAEDTDWAQIAALYARLVVLTPGPVVALNHAAAVAMARGPEHGLSLVDDLEASGRLAD
CCCCCCCHHHHHHHHHHHHHEECCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHCCCCCCC
YHLLPAARADLLRRLGRKDEAASAYRRALAMVRTAPERRFLEARLLELLAE
EECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430; 7751302 [H]