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The map label for this gene is 108758298

Identifier: 108758298

GI number: 108758298

Start: 3187362

End: 3188252

Strand: Reverse

Name: 108758298

Synonym: MXAN_2737

Alternate gene names: NA

Gene position: 3188252-3187362 (Counterclockwise)

Preceding gene: 108757860

Following gene: 108761335

Centisome position: 34.88

GC content: 71.04

Gene sequence:

>891_bases
ATGAGCCAGGCTCCGGAAACGCTGACGCCGCTGCTGCTCGCGGGGGCACCCGAGTCACTGCACGACACGCTGCGCTCCGC
GCCCGCGCTGGAGGCCCTGCTCACGGAGCTGCTCGACCAAGGCCGTGCGGCGTGGCCCACCGTGGCGCTGGCGCCCGCGG
CCCTGTTGCACCACGTGGGCCGGCACCTGCGCGAGGAAGGCACACCCCTGGATGCGCTCAAGCAGCTCCATGCCGCGGAC
GTCTACCTGGCATGTGCCTGTGCCCAGGGAGAGCCCCAGGCGTTGCAGCTCTTCGAGAAGCACGTCCTCCAGAAAGCCGC
CGCACGACTGTCCCGGCACCTCACGGCGATGGTGGACGAGGTGCTCCAGGTGACGCGCCAGCGGCTGCTACTGGGCGTTC
ACGGCTGCGCGCCGAAAATCGCGGAGTACTCGGGCCGGGGCTCGCTGGGCGGCTGGGTGCGAATCGTCGCCTCGCGCATC
GGCGGCGAGCTGCTGGAGCAGACCGGCCGCCACGAGCAGTCCTCCACGCCTCCGGAGGCCTTGGAGCAACTGTTGTCCCG
GGACGACCCCGAGCGAAACGTGCTCCAGGCCCACTCCCGGCAAGCCCTGTCCGAATCCCTCCAGGCCGCGCTGGCGACGT
TGTCCGAACGGGAGCGCGCGCTTTTGCGCCTGCACCACCTCCACGGCCTCACCATGGACCGCATCGCCACGCTGTACGCG
GAGCCCCGCTCCAGTGTCGCACGCCACGTGGCCCAGGCCCGTGAGCGGCTCCTGAAGCTGACCCACCGAGAGCTGGCCGC
CCGGCTGAAGCTGGACGGGCGCGAGGTGGAGAGCCTCCTGGGCCTGGTCCAGAGCCGCCTGGACCTCAGCCTCCACCGTC
TGATGAGCTGA

Upstream 100 bases:

>100_bases
AAGCGTGGCTGGAAGCCCAGGGTCTGCGCGCCCGGCGCGAACACGACGAGCTCGTGGCATGGCAGACGCGGCACCTGCCC
CGTGTGAGCGAGGTCACCCG

Downstream 100 bases:

>100_bases
TGCGTGTCTCGAATGCCGCGCTGATTCAGGCTGCGCATCCATCGCAGGCGATGCCATCATCCGGGGAAACCCTGGACGAA
AGAGCCCTCAACGATGGCGC

Product: putative DNA-binding regulatory protein

Products: NA

Alternate protein names: RNA Polymerase Sigma-24 Subunit ECF Subfamily

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MSQAPETLTPLLLAGAPESLHDTLRSAPALEALLTELLDQGRAAWPTVALAPAALLHHVGRHLREEGTPLDALKQLHAAD
VYLACACAQGEPQALQLFEKHVLQKAAARLSRHLTAMVDEVLQVTRQRLLLGVHGCAPKIAEYSGRGSLGGWVRIVASRI
GGELLEQTGRHEQSSTPPEALEQLLSRDDPERNVLQAHSRQALSESLQAALATLSERERALLRLHHLHGLTMDRIATLYA
EPRSSVARHVAQARERLLKLTHRELAARLKLDGREVESLLGLVQSRLDLSLHRLMS

Sequences:

>Translated_296_residues
MSQAPETLTPLLLAGAPESLHDTLRSAPALEALLTELLDQGRAAWPTVALAPAALLHHVGRHLREEGTPLDALKQLHAAD
VYLACACAQGEPQALQLFEKHVLQKAAARLSRHLTAMVDEVLQVTRQRLLLGVHGCAPKIAEYSGRGSLGGWVRIVASRI
GGELLEQTGRHEQSSTPPEALEQLLSRDDPERNVLQAHSRQALSESLQAALATLSERERALLRLHHLHGLTMDRIATLYA
EPRSSVARHVAQARERLLKLTHRELAARLKLDGREVESLLGLVQSRLDLSLHRLMS
>Mature_295_residues
SQAPETLTPLLLAGAPESLHDTLRSAPALEALLTELLDQGRAAWPTVALAPAALLHHVGRHLREEGTPLDALKQLHAADV
YLACACAQGEPQALQLFEKHVLQKAAARLSRHLTAMVDEVLQVTRQRLLLGVHGCAPKIAEYSGRGSLGGWVRIVASRIG
GELLEQTGRHEQSSTPPEALEQLLSRDDPERNVLQAHSRQALSESLQAALATLSERERALLRLHHLHGLTMDRIATLYAE
PRSSVARHVAQARERLLKLTHRELAARLKLDGREVESLLGLVQSRLDLSLHRLMS

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32476; Mature: 32345

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAPETLTPLLLAGAPESLHDTLRSAPALEALLTELLDQGRAAWPTVALAPAALLHHVG
CCCCCHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
RHLREEGTPLDALKQLHAADVYLACACAQGEPQALQLFEKHVLQKAAARLSRHLTAMVDE
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLQVTRQRLLLGVHGCAPKIAEYSGRGSLGGWVRIVASRIGGELLEQTGRHEQSSTPPEA
HHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
LEQLLSRDDPERNVLQAHSRQALSESLQAALATLSERERALLRLHHLHGLTMDRIATLYA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
EPRSSVARHVAQARERLLKLTHRELAARLKLDGREVESLLGLVQSRLDLSLHRLMS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQAPETLTPLLLAGAPESLHDTLRSAPALEALLTELLDQGRAAWPTVALAPAALLHHVG
CCCCHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
RHLREEGTPLDALKQLHAADVYLACACAQGEPQALQLFEKHVLQKAAARLSRHLTAMVDE
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLQVTRQRLLLGVHGCAPKIAEYSGRGSLGGWVRIVASRIGGELLEQTGRHEQSSTPPEA
HHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
LEQLLSRDDPERNVLQAHSRQALSESLQAALATLSERERALLRLHHLHGLTMDRIATLYA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
EPRSSVARHVAQARERLLKLTHRELAARLKLDGREVESLLGLVQSRLDLSLHRLMS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA