| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is chiA1 [H]
Identifier: 108758285
GI number: 108758285
Start: 3437095
End: 3438894
Strand: Direct
Name: chiA1 [H]
Synonym: MXAN_2927
Alternate gene names: 108758285
Gene position: 3437095-3438894 (Clockwise)
Preceding gene: 108760310
Following gene: 108759803
Centisome position: 37.61
GC content: 66.67
Gene sequence:
>1800_bases ATGCGTCGCAGTTGGTGGGCCTCTGGCCTGATCGCCACCGCCTTGTCCGTGGCTGGCTGTGATTCCGAAGTGCCGTCGTC TCACGTTCGGGACATGACGGCGTTCCAGGATGCGGCCCTGGCCGCGGAGTGGGCAGCGGGCGTCGCGTACTCCGTGGGAA CGCGCGTCACCTATCAAGGGCGCCTCTATGAGTGCCGCCAGCCGCACACGTCCCAGGCGGACTGGACACCGGTGGCGGTG GCCTCGCTGTGGTTGGACCTGGGGCCCGCGGGCGGTGGTGAGCCGGACGCGGGCAGCGGCGGAACGGACGCGGGCACGGG CGGGGACGTCACCGCGCCCACCGTGGGCTTGAGTGCCAGTGCCTCGCGCATCATCGCCGTGGGGCCGCTGAGCCTGACGG CCACGGCGACGGACGACGTGGGCGTGACGCGGGTGGAGATTCTGGAGAACGGTGCCGTCGTCGCCACCGGCTCGCAGTTC AGCCGGGCCTTCAGCGGTTGGGAGCAGAACGGCACGTATGTCTACGCGGTGCGCGCCTATGACGCCGCGGGCAACGTGGG GACCACCACGCTCACCGTCGTCGTGGAGATTCCAGGTGGGCCGCCGCCGGGAGGAAAGCGCATCGTCGGCTACTTCACCG CGTGGGGCATCTACGCGCGCAACTACCACGTGTCCAACGTGCAGCCGTCCAAGCTCACGCACATCAACTACGCGTTCTCC AACATCTCCGGGGATGGACGCTGCATCCTCGGCGACCCGTTCGCGGACATCGACAAGAGCGGCGGCTGGCAGGGTGAGTG GGACCCCGGTCAGTTGCGCGGCAACTTCCGCGCGTTCAAGGAGATGAAGCGGCAGAACCCGCACCTGAAGCTGCTCATCT CCGTGGGCGGCTGGTCCTGGTCCACGCACTTCTCCACCGTGGCGTCCTCGCCTGCTTCGCGCGCGGCCTTCGTGAAGTCC TGCGTGGACCTCTACATCCGTGGCCAGTACCCCGGTGTGGACCCCGTCAACGGCGAGGGCGTGTTCGACGGCATCGACAT CGACTGGGAGTACCCGGTCGGCGGCGGCCTGCCAGGCAACAGCAACAGCCCGGCTGACAAGCAGAACTACACGCTGCTGA TGCAGGAGTTCCGCAGTCAGCTCAACGCCGTCACCACGCAGACGGGCAAGCCGTACCTGCTCACCATCGCCACGGGCGCG TCGCCGGACCTGCTGGAGAACAAGCAGGAGACGAAGAAGCTGTCCGACGTGCTCGATTGGATCAACGTGATGTCCTACGA CTACCACGGGGCCTTCGAGAGCACGGTGAACTTCCACTCGGCGCTCCATCGCGTCACGGGTGACCCGGGCGCGGCCACGG GCTTCTACACGGATGGCTCGGTGTCGAAGATGCTGGCGCTGGGCGTGCCGCCCGCGAAGATTGTCGTCGGCGTGCCCTTC TACGGCCGGGGTTGGGGCAGCGTGCCCAACGTGAACAACGGCCTGTTCCAGAGTGGTGTGCCCACGCGCGGCACCTGGGA TGACGGCTCGTCGGGTCTGACGGGTGTGTTCGACTTCAAGGACATCAAGGCCAACTACGAGCGCCCCGGTTCCGGTTACA CGAAGTTCTTCCACCCGGAGGCGAAGGAGGCCTACGTCTACAACCCTGCCACGGGCATCTGGATTGGGTATGACGACGTG CAGAGCATCAACGCCAAGGCGGACTACATCCTGAACAAGAACCTGGGCGGCGCGATGTTCTGGGAGTTGAGCGGTGATGA CGGCTCGCTGCTCGATGCGCTGGCACGGAAGCTGCGCTGA
Upstream 100 bases:
>100_bases ACCCGCAGACGAGCCGCGTGGAACCCTTGTCGAGAAGCCCGGGGCAGGCCTGCACCGGGCTTGGGCTCGGCATGTGTCCA GCGCGGCGAGGAGCACATGC
Downstream 100 bases:
>100_bases CCCGGGCTGAGCCTTTGACAGGCATTGTAAGCGTGTCGTGAAGCCATACGCCGGGGGACTTCTGTTCCCCGGCGTCATGG CGTTAGGGTTTGCCGCATGT
Product: glycosy hydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 599; Mature: 599
Protein sequence:
>599_residues MRRSWWASGLIATALSVAGCDSEVPSSHVRDMTAFQDAALAAEWAAGVAYSVGTRVTYQGRLYECRQPHTSQADWTPVAV ASLWLDLGPAGGGEPDAGSGGTDAGTGGDVTAPTVGLSASASRIIAVGPLSLTATATDDVGVTRVEILENGAVVATGSQF SRAFSGWEQNGTYVYAVRAYDAAGNVGTTTLTVVVEIPGGPPPGGKRIVGYFTAWGIYARNYHVSNVQPSKLTHINYAFS NISGDGRCILGDPFADIDKSGGWQGEWDPGQLRGNFRAFKEMKRQNPHLKLLISVGGWSWSTHFSTVASSPASRAAFVKS CVDLYIRGQYPGVDPVNGEGVFDGIDIDWEYPVGGGLPGNSNSPADKQNYTLLMQEFRSQLNAVTTQTGKPYLLTIATGA SPDLLENKQETKKLSDVLDWINVMSYDYHGAFESTVNFHSALHRVTGDPGAATGFYTDGSVSKMLALGVPPAKIVVGVPF YGRGWGSVPNVNNGLFQSGVPTRGTWDDGSSGLTGVFDFKDIKANYERPGSGYTKFFHPEAKEAYVYNPATGIWIGYDDV QSINAKADYILNKNLGGAMFWELSGDDGSLLDALARKLR
Sequences:
>Translated_599_residues MRRSWWASGLIATALSVAGCDSEVPSSHVRDMTAFQDAALAAEWAAGVAYSVGTRVTYQGRLYECRQPHTSQADWTPVAV ASLWLDLGPAGGGEPDAGSGGTDAGTGGDVTAPTVGLSASASRIIAVGPLSLTATATDDVGVTRVEILENGAVVATGSQF SRAFSGWEQNGTYVYAVRAYDAAGNVGTTTLTVVVEIPGGPPPGGKRIVGYFTAWGIYARNYHVSNVQPSKLTHINYAFS NISGDGRCILGDPFADIDKSGGWQGEWDPGQLRGNFRAFKEMKRQNPHLKLLISVGGWSWSTHFSTVASSPASRAAFVKS CVDLYIRGQYPGVDPVNGEGVFDGIDIDWEYPVGGGLPGNSNSPADKQNYTLLMQEFRSQLNAVTTQTGKPYLLTIATGA SPDLLENKQETKKLSDVLDWINVMSYDYHGAFESTVNFHSALHRVTGDPGAATGFYTDGSVSKMLALGVPPAKIVVGVPF YGRGWGSVPNVNNGLFQSGVPTRGTWDDGSSGLTGVFDFKDIKANYERPGSGYTKFFHPEAKEAYVYNPATGIWIGYDDV QSINAKADYILNKNLGGAMFWELSGDDGSLLDALARKLR >Mature_599_residues MRRSWWASGLIATALSVAGCDSEVPSSHVRDMTAFQDAALAAEWAAGVAYSVGTRVTYQGRLYECRQPHTSQADWTPVAV ASLWLDLGPAGGGEPDAGSGGTDAGTGGDVTAPTVGLSASASRIIAVGPLSLTATATDDVGVTRVEILENGAVVATGSQF SRAFSGWEQNGTYVYAVRAYDAAGNVGTTTLTVVVEIPGGPPPGGKRIVGYFTAWGIYARNYHVSNVQPSKLTHINYAFS NISGDGRCILGDPFADIDKSGGWQGEWDPGQLRGNFRAFKEMKRQNPHLKLLISVGGWSWSTHFSTVASSPASRAAFVKS CVDLYIRGQYPGVDPVNGEGVFDGIDIDWEYPVGGGLPGNSNSPADKQNYTLLMQEFRSQLNAVTTQTGKPYLLTIATGA SPDLLENKQETKKLSDVLDWINVMSYDYHGAFESTVNFHSALHRVTGDPGAATGFYTDGSVSKMLALGVPPAKIVVGVPF YGRGWGSVPNVNNGLFQSGVPTRGTWDDGSSGLTGVFDFKDIKANYERPGSGYTKFFHPEAKEAYVYNPATGIWIGYDDV QSINAKADYILNKNLGGAMFWELSGDDGSLLDALARKLR
Specific function: Unknown
COG id: COG3325
COG function: function code G; Chitinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 fibronectin type-III domains [H]
Homologues:
Organism=Homo sapiens, GI4502809, Length=405, Percent_Identity=29.8765432098765, Blast_Score=168, Evalue=2e-41, Organism=Homo sapiens, GI144226251, Length=388, Percent_Identity=31.4432989690722, Blast_Score=162, Evalue=1e-39, Organism=Homo sapiens, GI133893286, Length=387, Percent_Identity=29.4573643410853, Blast_Score=155, Evalue=7e-38, Organism=Homo sapiens, GI68533255, Length=408, Percent_Identity=25.9803921568627, Blast_Score=129, Evalue=8e-30, Organism=Homo sapiens, GI68533253, Length=392, Percent_Identity=26.2755102040816, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI42542398, Length=283, Percent_Identity=30.7420494699647, Blast_Score=122, Evalue=9e-28, Organism=Homo sapiens, GI68533260, Length=320, Percent_Identity=27.5, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI58386720, Length=398, Percent_Identity=25.8793969849246, Blast_Score=118, Evalue=1e-26, Organism=Caenorhabditis elegans, GI71995504, Length=398, Percent_Identity=31.4070351758794, Blast_Score=173, Evalue=3e-43, Organism=Caenorhabditis elegans, GI17563680, Length=398, Percent_Identity=31.4070351758794, Blast_Score=169, Evalue=5e-42, Organism=Caenorhabditis elegans, GI17551250, Length=384, Percent_Identity=32.5520833333333, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17559362, Length=395, Percent_Identity=29.1139240506329, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17535565, Length=434, Percent_Identity=24.1935483870968, Blast_Score=101, Evalue=9e-22, Organism=Caenorhabditis elegans, GI17531695, Length=411, Percent_Identity=25.0608272506083, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17539198, Length=407, Percent_Identity=24.0786240786241, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI72000004, Length=402, Percent_Identity=23.6318407960199, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17535579, Length=422, Percent_Identity=23.696682464455, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17535575, Length=408, Percent_Identity=23.7745098039216, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17536195, Length=411, Percent_Identity=23.1143552311436, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17531683, Length=411, Percent_Identity=22.8710462287105, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17535585, Length=401, Percent_Identity=22.9426433915212, Blast_Score=86, Evalue=6e-17, Organism=Caenorhabditis elegans, GI71993650, Length=445, Percent_Identity=23.3707865168539, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI212645385, Length=405, Percent_Identity=22.2222222222222, Blast_Score=82, Evalue=8e-16, Organism=Caenorhabditis elegans, GI32564156, Length=405, Percent_Identity=22.2222222222222, Blast_Score=82, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17531685, Length=399, Percent_Identity=23.3082706766917, Blast_Score=79, Evalue=7e-15, Organism=Caenorhabditis elegans, GI32564165, Length=397, Percent_Identity=22.6700251889169, Blast_Score=79, Evalue=9e-15, Organism=Caenorhabditis elegans, GI193210674, Length=250, Percent_Identity=22.8, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17535567, Length=401, Percent_Identity=23.1920199501247, Blast_Score=67, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6320579, Length=314, Percent_Identity=28.343949044586, Blast_Score=116, Evalue=8e-27, Organism=Drosophila melanogaster, GI24655584, Length=399, Percent_Identity=29.0726817042606, Blast_Score=168, Evalue=8e-42, Organism=Drosophila melanogaster, GI161077700, Length=391, Percent_Identity=29.156010230179, Blast_Score=166, Evalue=5e-41, Organism=Drosophila melanogaster, GI45550474, Length=393, Percent_Identity=30.0254452926209, Blast_Score=165, Evalue=7e-41, Organism=Drosophila melanogaster, GI221329807, Length=391, Percent_Identity=29.156010230179, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI21358195, Length=392, Percent_Identity=27.8061224489796, Blast_Score=139, Evalue=6e-33, Organism=Drosophila melanogaster, GI221330815, Length=393, Percent_Identity=26.4631043256997, Blast_Score=138, Evalue=9e-33, Organism=Drosophila melanogaster, GI22024049, Length=393, Percent_Identity=29.0076335877863, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI28573679, Length=412, Percent_Identity=29.126213592233, Blast_Score=131, Evalue=2e-30, Organism=Drosophila melanogaster, GI116007452, Length=418, Percent_Identity=24.4019138755981, Blast_Score=115, Evalue=7e-26, Organism=Drosophila melanogaster, GI24640248, Length=385, Percent_Identity=24.4155844155844, Blast_Score=109, Evalue=6e-24, Organism=Drosophila melanogaster, GI24656647, Length=299, Percent_Identity=23.4113712374582, Blast_Score=77, Evalue=4e-14, Organism=Drosophila melanogaster, GI17137072, Length=368, Percent_Identity=21.7391304347826, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003610 - InterPro: IPR011583 - InterPro: IPR008957 - InterPro: IPR003961 - InterPro: IPR001223 - InterPro: IPR001579 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013783 [H]
Pfam domain/function: PF02839 CBM_5_12; PF00041 fn3; PF00704 Glyco_hydro_18 [H]
EC number: =3.2.1.14 [H]
Molecular weight: Translated: 63818; Mature: 63818
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01095 CHITINASE_18
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSWWASGLIATALSVAGCDSEVPSSHVRDMTAFQDAALAAEWAAGVAYSVGTRVTYQG CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCEEEECC RLYECRQPHTSQADWTPVAVASLWLDLGPAGGGEPDAGSGGTDAGTGGDVTAPTVGLSAS CEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASRIIAVGPLSLTATATDDVGVTRVEILENGAVVATGSQFSRAFSGWEQNGTYVYAVRAY CCEEEEEECCEEEEECCCCCCCEEEEEECCCCEEEECHHHHHHHCCCCCCCCEEEEEEEE DAAGNVGTTTLTVVVEIPGGPPPGGKRIVGYFTAWGIYARNYHVSNVQPSKLTHINYAFS CCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCEEEEEEEEE NISGDGRCILGDPFADIDKSGGWQGEWDPGQLRGNFRAFKEMKRQNPHLKLLISVGGWSW CCCCCCEEEECCCHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCEEEEEEECCCCE STHFSTVASSPASRAAFVKSCVDLYIRGQYPGVDPVNGEGVFDGIDIDWEYPVGGGLPGN EHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCEECCEEEEECCCCCCCCCCC SNSPADKQNYTLLMQEFRSQLNAVTTQTGKPYLLTIATGASPDLLENKQETKKLSDVLDW CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHHH INVMSYDYHGAFESTVNFHSALHRVTGDPGAATGFYTDGSVSKMLALGVPPAKIVVGVPF HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHEEECCCCHHEEEECCC YGRGWGSVPNVNNGLFQSGVPTRGTWDDGSSGLTGVFDFKDIKANYERPGSGYTKFFHPE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHCCCCCCCCCCCEEECCC AKEAYVYNPATGIWIGYDDVQSINAKADYILNKNLGGAMFWELSGDDGSLLDALARKLR CCCEEEECCCCEEEEECHHHHHCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCC >Mature Secondary Structure MRRSWWASGLIATALSVAGCDSEVPSSHVRDMTAFQDAALAAEWAAGVAYSVGTRVTYQG CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCEEEECC RLYECRQPHTSQADWTPVAVASLWLDLGPAGGGEPDAGSGGTDAGTGGDVTAPTVGLSAS CEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASRIIAVGPLSLTATATDDVGVTRVEILENGAVVATGSQFSRAFSGWEQNGTYVYAVRAY CCEEEEEECCEEEEECCCCCCCEEEEEECCCCEEEECHHHHHHHCCCCCCCCEEEEEEEE DAAGNVGTTTLTVVVEIPGGPPPGGKRIVGYFTAWGIYARNYHVSNVQPSKLTHINYAFS CCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCEEEEEEEEE NISGDGRCILGDPFADIDKSGGWQGEWDPGQLRGNFRAFKEMKRQNPHLKLLISVGGWSW CCCCCCEEEECCCHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCEEEEEEECCCCE STHFSTVASSPASRAAFVKSCVDLYIRGQYPGVDPVNGEGVFDGIDIDWEYPVGGGLPGN EHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCEECCEEEEECCCCCCCCCCC SNSPADKQNYTLLMQEFRSQLNAVTTQTGKPYLLTIATGASPDLLENKQETKKLSDVLDW CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHHH INVMSYDYHGAFESTVNFHSALHRVTGDPGAATGFYTDGSVSKMLALGVPPAKIVVGVPF HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHEEECCCCHHEEEECCC YGRGWGSVPNVNNGLFQSGVPTRGTWDDGSSGLTGVFDFKDIKANYERPGSGYTKFFHPE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHCCCCCCCCCCCEEECCC AKEAYVYNPATGIWIGYDDVQSINAKADYILNKNLGGAMFWELSGDDGSLLDALARKLR CCCEEEECCCCEEEEECHHHHHCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2203782; 8103047 [H]