Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is chiA1 [H]

Identifier: 108758285

GI number: 108758285

Start: 3437095

End: 3438894

Strand: Direct

Name: chiA1 [H]

Synonym: MXAN_2927

Alternate gene names: 108758285

Gene position: 3437095-3438894 (Clockwise)

Preceding gene: 108760310

Following gene: 108759803

Centisome position: 37.61

GC content: 66.67

Gene sequence:

>1800_bases
ATGCGTCGCAGTTGGTGGGCCTCTGGCCTGATCGCCACCGCCTTGTCCGTGGCTGGCTGTGATTCCGAAGTGCCGTCGTC
TCACGTTCGGGACATGACGGCGTTCCAGGATGCGGCCCTGGCCGCGGAGTGGGCAGCGGGCGTCGCGTACTCCGTGGGAA
CGCGCGTCACCTATCAAGGGCGCCTCTATGAGTGCCGCCAGCCGCACACGTCCCAGGCGGACTGGACACCGGTGGCGGTG
GCCTCGCTGTGGTTGGACCTGGGGCCCGCGGGCGGTGGTGAGCCGGACGCGGGCAGCGGCGGAACGGACGCGGGCACGGG
CGGGGACGTCACCGCGCCCACCGTGGGCTTGAGTGCCAGTGCCTCGCGCATCATCGCCGTGGGGCCGCTGAGCCTGACGG
CCACGGCGACGGACGACGTGGGCGTGACGCGGGTGGAGATTCTGGAGAACGGTGCCGTCGTCGCCACCGGCTCGCAGTTC
AGCCGGGCCTTCAGCGGTTGGGAGCAGAACGGCACGTATGTCTACGCGGTGCGCGCCTATGACGCCGCGGGCAACGTGGG
GACCACCACGCTCACCGTCGTCGTGGAGATTCCAGGTGGGCCGCCGCCGGGAGGAAAGCGCATCGTCGGCTACTTCACCG
CGTGGGGCATCTACGCGCGCAACTACCACGTGTCCAACGTGCAGCCGTCCAAGCTCACGCACATCAACTACGCGTTCTCC
AACATCTCCGGGGATGGACGCTGCATCCTCGGCGACCCGTTCGCGGACATCGACAAGAGCGGCGGCTGGCAGGGTGAGTG
GGACCCCGGTCAGTTGCGCGGCAACTTCCGCGCGTTCAAGGAGATGAAGCGGCAGAACCCGCACCTGAAGCTGCTCATCT
CCGTGGGCGGCTGGTCCTGGTCCACGCACTTCTCCACCGTGGCGTCCTCGCCTGCTTCGCGCGCGGCCTTCGTGAAGTCC
TGCGTGGACCTCTACATCCGTGGCCAGTACCCCGGTGTGGACCCCGTCAACGGCGAGGGCGTGTTCGACGGCATCGACAT
CGACTGGGAGTACCCGGTCGGCGGCGGCCTGCCAGGCAACAGCAACAGCCCGGCTGACAAGCAGAACTACACGCTGCTGA
TGCAGGAGTTCCGCAGTCAGCTCAACGCCGTCACCACGCAGACGGGCAAGCCGTACCTGCTCACCATCGCCACGGGCGCG
TCGCCGGACCTGCTGGAGAACAAGCAGGAGACGAAGAAGCTGTCCGACGTGCTCGATTGGATCAACGTGATGTCCTACGA
CTACCACGGGGCCTTCGAGAGCACGGTGAACTTCCACTCGGCGCTCCATCGCGTCACGGGTGACCCGGGCGCGGCCACGG
GCTTCTACACGGATGGCTCGGTGTCGAAGATGCTGGCGCTGGGCGTGCCGCCCGCGAAGATTGTCGTCGGCGTGCCCTTC
TACGGCCGGGGTTGGGGCAGCGTGCCCAACGTGAACAACGGCCTGTTCCAGAGTGGTGTGCCCACGCGCGGCACCTGGGA
TGACGGCTCGTCGGGTCTGACGGGTGTGTTCGACTTCAAGGACATCAAGGCCAACTACGAGCGCCCCGGTTCCGGTTACA
CGAAGTTCTTCCACCCGGAGGCGAAGGAGGCCTACGTCTACAACCCTGCCACGGGCATCTGGATTGGGTATGACGACGTG
CAGAGCATCAACGCCAAGGCGGACTACATCCTGAACAAGAACCTGGGCGGCGCGATGTTCTGGGAGTTGAGCGGTGATGA
CGGCTCGCTGCTCGATGCGCTGGCACGGAAGCTGCGCTGA

Upstream 100 bases:

>100_bases
ACCCGCAGACGAGCCGCGTGGAACCCTTGTCGAGAAGCCCGGGGCAGGCCTGCACCGGGCTTGGGCTCGGCATGTGTCCA
GCGCGGCGAGGAGCACATGC

Downstream 100 bases:

>100_bases
CCCGGGCTGAGCCTTTGACAGGCATTGTAAGCGTGTCGTGAAGCCATACGCCGGGGGACTTCTGTTCCCCGGCGTCATGG
CGTTAGGGTTTGCCGCATGT

Product: glycosy hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 599; Mature: 599

Protein sequence:

>599_residues
MRRSWWASGLIATALSVAGCDSEVPSSHVRDMTAFQDAALAAEWAAGVAYSVGTRVTYQGRLYECRQPHTSQADWTPVAV
ASLWLDLGPAGGGEPDAGSGGTDAGTGGDVTAPTVGLSASASRIIAVGPLSLTATATDDVGVTRVEILENGAVVATGSQF
SRAFSGWEQNGTYVYAVRAYDAAGNVGTTTLTVVVEIPGGPPPGGKRIVGYFTAWGIYARNYHVSNVQPSKLTHINYAFS
NISGDGRCILGDPFADIDKSGGWQGEWDPGQLRGNFRAFKEMKRQNPHLKLLISVGGWSWSTHFSTVASSPASRAAFVKS
CVDLYIRGQYPGVDPVNGEGVFDGIDIDWEYPVGGGLPGNSNSPADKQNYTLLMQEFRSQLNAVTTQTGKPYLLTIATGA
SPDLLENKQETKKLSDVLDWINVMSYDYHGAFESTVNFHSALHRVTGDPGAATGFYTDGSVSKMLALGVPPAKIVVGVPF
YGRGWGSVPNVNNGLFQSGVPTRGTWDDGSSGLTGVFDFKDIKANYERPGSGYTKFFHPEAKEAYVYNPATGIWIGYDDV
QSINAKADYILNKNLGGAMFWELSGDDGSLLDALARKLR

Sequences:

>Translated_599_residues
MRRSWWASGLIATALSVAGCDSEVPSSHVRDMTAFQDAALAAEWAAGVAYSVGTRVTYQGRLYECRQPHTSQADWTPVAV
ASLWLDLGPAGGGEPDAGSGGTDAGTGGDVTAPTVGLSASASRIIAVGPLSLTATATDDVGVTRVEILENGAVVATGSQF
SRAFSGWEQNGTYVYAVRAYDAAGNVGTTTLTVVVEIPGGPPPGGKRIVGYFTAWGIYARNYHVSNVQPSKLTHINYAFS
NISGDGRCILGDPFADIDKSGGWQGEWDPGQLRGNFRAFKEMKRQNPHLKLLISVGGWSWSTHFSTVASSPASRAAFVKS
CVDLYIRGQYPGVDPVNGEGVFDGIDIDWEYPVGGGLPGNSNSPADKQNYTLLMQEFRSQLNAVTTQTGKPYLLTIATGA
SPDLLENKQETKKLSDVLDWINVMSYDYHGAFESTVNFHSALHRVTGDPGAATGFYTDGSVSKMLALGVPPAKIVVGVPF
YGRGWGSVPNVNNGLFQSGVPTRGTWDDGSSGLTGVFDFKDIKANYERPGSGYTKFFHPEAKEAYVYNPATGIWIGYDDV
QSINAKADYILNKNLGGAMFWELSGDDGSLLDALARKLR
>Mature_599_residues
MRRSWWASGLIATALSVAGCDSEVPSSHVRDMTAFQDAALAAEWAAGVAYSVGTRVTYQGRLYECRQPHTSQADWTPVAV
ASLWLDLGPAGGGEPDAGSGGTDAGTGGDVTAPTVGLSASASRIIAVGPLSLTATATDDVGVTRVEILENGAVVATGSQF
SRAFSGWEQNGTYVYAVRAYDAAGNVGTTTLTVVVEIPGGPPPGGKRIVGYFTAWGIYARNYHVSNVQPSKLTHINYAFS
NISGDGRCILGDPFADIDKSGGWQGEWDPGQLRGNFRAFKEMKRQNPHLKLLISVGGWSWSTHFSTVASSPASRAAFVKS
CVDLYIRGQYPGVDPVNGEGVFDGIDIDWEYPVGGGLPGNSNSPADKQNYTLLMQEFRSQLNAVTTQTGKPYLLTIATGA
SPDLLENKQETKKLSDVLDWINVMSYDYHGAFESTVNFHSALHRVTGDPGAATGFYTDGSVSKMLALGVPPAKIVVGVPF
YGRGWGSVPNVNNGLFQSGVPTRGTWDDGSSGLTGVFDFKDIKANYERPGSGYTKFFHPEAKEAYVYNPATGIWIGYDDV
QSINAKADYILNKNLGGAMFWELSGDDGSLLDALARKLR

Specific function: Unknown

COG id: COG3325

COG function: function code G; Chitinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 fibronectin type-III domains [H]

Homologues:

Organism=Homo sapiens, GI4502809, Length=405, Percent_Identity=29.8765432098765, Blast_Score=168, Evalue=2e-41,
Organism=Homo sapiens, GI144226251, Length=388, Percent_Identity=31.4432989690722, Blast_Score=162, Evalue=1e-39,
Organism=Homo sapiens, GI133893286, Length=387, Percent_Identity=29.4573643410853, Blast_Score=155, Evalue=7e-38,
Organism=Homo sapiens, GI68533255, Length=408, Percent_Identity=25.9803921568627, Blast_Score=129, Evalue=8e-30,
Organism=Homo sapiens, GI68533253, Length=392, Percent_Identity=26.2755102040816, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI42542398, Length=283, Percent_Identity=30.7420494699647, Blast_Score=122, Evalue=9e-28,
Organism=Homo sapiens, GI68533260, Length=320, Percent_Identity=27.5, Blast_Score=121, Evalue=2e-27,
Organism=Homo sapiens, GI58386720, Length=398, Percent_Identity=25.8793969849246, Blast_Score=118, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71995504, Length=398, Percent_Identity=31.4070351758794, Blast_Score=173, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI17563680, Length=398, Percent_Identity=31.4070351758794, Blast_Score=169, Evalue=5e-42,
Organism=Caenorhabditis elegans, GI17551250, Length=384, Percent_Identity=32.5520833333333, Blast_Score=160, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17559362, Length=395, Percent_Identity=29.1139240506329, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI17535565, Length=434, Percent_Identity=24.1935483870968, Blast_Score=101, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI17531695, Length=411, Percent_Identity=25.0608272506083, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17539198, Length=407, Percent_Identity=24.0786240786241, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI72000004, Length=402, Percent_Identity=23.6318407960199, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17535579, Length=422, Percent_Identity=23.696682464455, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17535575, Length=408, Percent_Identity=23.7745098039216, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17536195, Length=411, Percent_Identity=23.1143552311436, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17531683, Length=411, Percent_Identity=22.8710462287105, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17535585, Length=401, Percent_Identity=22.9426433915212, Blast_Score=86, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI71993650, Length=445, Percent_Identity=23.3707865168539, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI212645385, Length=405, Percent_Identity=22.2222222222222, Blast_Score=82, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI32564156, Length=405, Percent_Identity=22.2222222222222, Blast_Score=82, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17531685, Length=399, Percent_Identity=23.3082706766917, Blast_Score=79, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI32564165, Length=397, Percent_Identity=22.6700251889169, Blast_Score=79, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI193210674, Length=250, Percent_Identity=22.8, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17535567, Length=401, Percent_Identity=23.1920199501247, Blast_Score=67, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6320579, Length=314, Percent_Identity=28.343949044586, Blast_Score=116, Evalue=8e-27,
Organism=Drosophila melanogaster, GI24655584, Length=399, Percent_Identity=29.0726817042606, Blast_Score=168, Evalue=8e-42,
Organism=Drosophila melanogaster, GI161077700, Length=391, Percent_Identity=29.156010230179, Blast_Score=166, Evalue=5e-41,
Organism=Drosophila melanogaster, GI45550474, Length=393, Percent_Identity=30.0254452926209, Blast_Score=165, Evalue=7e-41,
Organism=Drosophila melanogaster, GI221329807, Length=391, Percent_Identity=29.156010230179, Blast_Score=164, Evalue=2e-40,
Organism=Drosophila melanogaster, GI21358195, Length=392, Percent_Identity=27.8061224489796, Blast_Score=139, Evalue=6e-33,
Organism=Drosophila melanogaster, GI221330815, Length=393, Percent_Identity=26.4631043256997, Blast_Score=138, Evalue=9e-33,
Organism=Drosophila melanogaster, GI22024049, Length=393, Percent_Identity=29.0076335877863, Blast_Score=136, Evalue=3e-32,
Organism=Drosophila melanogaster, GI28573679, Length=412, Percent_Identity=29.126213592233, Blast_Score=131, Evalue=2e-30,
Organism=Drosophila melanogaster, GI116007452, Length=418, Percent_Identity=24.4019138755981, Blast_Score=115, Evalue=7e-26,
Organism=Drosophila melanogaster, GI24640248, Length=385, Percent_Identity=24.4155844155844, Blast_Score=109, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24656647, Length=299, Percent_Identity=23.4113712374582, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI17137072, Length=368, Percent_Identity=21.7391304347826, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003610
- InterPro:   IPR011583
- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR001223
- InterPro:   IPR001579
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783 [H]

Pfam domain/function: PF02839 CBM_5_12; PF00041 fn3; PF00704 Glyco_hydro_18 [H]

EC number: =3.2.1.14 [H]

Molecular weight: Translated: 63818; Mature: 63818

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01095 CHITINASE_18

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSWWASGLIATALSVAGCDSEVPSSHVRDMTAFQDAALAAEWAAGVAYSVGTRVTYQG
CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCEEEECC
RLYECRQPHTSQADWTPVAVASLWLDLGPAGGGEPDAGSGGTDAGTGGDVTAPTVGLSAS
CEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASRIIAVGPLSLTATATDDVGVTRVEILENGAVVATGSQFSRAFSGWEQNGTYVYAVRAY
CCEEEEEECCEEEEECCCCCCCEEEEEECCCCEEEECHHHHHHHCCCCCCCCEEEEEEEE
DAAGNVGTTTLTVVVEIPGGPPPGGKRIVGYFTAWGIYARNYHVSNVQPSKLTHINYAFS
CCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCEEEEEEEEE
NISGDGRCILGDPFADIDKSGGWQGEWDPGQLRGNFRAFKEMKRQNPHLKLLISVGGWSW
CCCCCCEEEECCCHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCEEEEEEECCCCE
STHFSTVASSPASRAAFVKSCVDLYIRGQYPGVDPVNGEGVFDGIDIDWEYPVGGGLPGN
EHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCEECCEEEEECCCCCCCCCCC
SNSPADKQNYTLLMQEFRSQLNAVTTQTGKPYLLTIATGASPDLLENKQETKKLSDVLDW
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHHH
INVMSYDYHGAFESTVNFHSALHRVTGDPGAATGFYTDGSVSKMLALGVPPAKIVVGVPF
HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHEEECCCCHHEEEECCC
YGRGWGSVPNVNNGLFQSGVPTRGTWDDGSSGLTGVFDFKDIKANYERPGSGYTKFFHPE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHCCCCCCCCCCCEEECCC
AKEAYVYNPATGIWIGYDDVQSINAKADYILNKNLGGAMFWELSGDDGSLLDALARKLR
CCCEEEECCCCEEEEECHHHHHCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCC
>Mature Secondary Structure
MRRSWWASGLIATALSVAGCDSEVPSSHVRDMTAFQDAALAAEWAAGVAYSVGTRVTYQG
CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCEEEECC
RLYECRQPHTSQADWTPVAVASLWLDLGPAGGGEPDAGSGGTDAGTGGDVTAPTVGLSAS
CEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASRIIAVGPLSLTATATDDVGVTRVEILENGAVVATGSQFSRAFSGWEQNGTYVYAVRAY
CCEEEEEECCEEEEECCCCCCCEEEEEECCCCEEEECHHHHHHHCCCCCCCCEEEEEEEE
DAAGNVGTTTLTVVVEIPGGPPPGGKRIVGYFTAWGIYARNYHVSNVQPSKLTHINYAFS
CCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCEEEEEEEEE
NISGDGRCILGDPFADIDKSGGWQGEWDPGQLRGNFRAFKEMKRQNPHLKLLISVGGWSW
CCCCCCEEEECCCHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCEEEEEEECCCCE
STHFSTVASSPASRAAFVKSCVDLYIRGQYPGVDPVNGEGVFDGIDIDWEYPVGGGLPGN
EHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCEECCEEEEECCCCCCCCCCC
SNSPADKQNYTLLMQEFRSQLNAVTTQTGKPYLLTIATGASPDLLENKQETKKLSDVLDW
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHHH
INVMSYDYHGAFESTVNFHSALHRVTGDPGAATGFYTDGSVSKMLALGVPPAKIVVGVPF
HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHEEECCCCHHEEEECCC
YGRGWGSVPNVNNGLFQSGVPTRGTWDDGSSGLTGVFDFKDIKANYERPGSGYTKFFHPE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHCCCCCCCCCCCEEECCC
AKEAYVYNPATGIWIGYDDVQSINAKADYILNKNLGGAMFWELSGDDGSLLDALARKLR
CCCEEEECCCCEEEEECHHHHHCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2203782; 8103047 [H]