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The map label for this gene is yeeY [H]

Identifier: 108758282

GI number: 108758282

Start: 6835726

End: 6836622

Strand: Direct

Name: yeeY [H]

Synonym: MXAN_5492

Alternate gene names: 108758282

Gene position: 6835726-6836622 (Clockwise)

Preceding gene: 108760921

Following gene: 108757555

Centisome position: 74.79

GC content: 71.57

Gene sequence:

>897_bases
ATGTCGGGCATGAACGTCACGTTGGAGCATGCCCGCGCCCTGGACGCCCTCGCCCGCCATGGCACCTTCACTGCCGCGGC
GGAGGCCCTGCGAAAGGGACACACGGCGGTGATGTACGCGCTGCGCACGCTCGAGGCGCAGACGGAGCTGACGCTGCTCG
ACCGGCGCGGCTACCGCACCCGGCTGACGCCCGCCGGGGAACGGATTCTGGAGCACTGCCGCAAGCTGCTGGCCGCCGAG
CGCGAGTTGGAGGCCGCGTGCGCGGAGATTCGCGCTGGCTGGGAGCCCGCGCTGCGCATCGTCTTCGACGGCATCTTCCC
CGCCGAGCCCCTGCTGCGCGTGCTGAAGGAATTGCGCGCCGAGGGCGCCAGCACCCGCTTCCACGTCTCCGCGGAGTTCC
TCTCCGGCGTGGAGGCGGCCTTCGTGCGCGAGGAGGCGAACCTGATGGTGACGCTGCTGCCGCCCACCGTGCCGGGCCTG
CGCACGTACCGCCTGCCGGAGCTCAAGGCCATCCTGGTGGCCCACCGGGGCCATCCCCTGGCCCGGCGGCGGGGACCGTT
GAAGGACGAGGATCTGGCCGAGCACCTGGTGCTCACGGTGCGCGGCTCGGACCCTCGGCTCCAGCTCAGCACCGGCGAGC
TGGAGGCACGCTCCACGGTGCATCTCAATGACTTCGCGGCGAAGAAGGCGGCCATCCTGGAGGGGCTGGGCTTCGGGTGG
CTGCCCGAATACATGGCCACCCGCGAGCTGCGCCGGGGCGAGCTGAAGGCCCTGAAGCTGGCGGGTGACGCCACCCACGC
ATTCCGCCCCCAGCTCCACCACCACTCGGGCATCCCCCTGGGGCGGGCCGCCCGCCGAATCGTGCAAGCGCTCACGGAGA
CGGAATCCACCTCTTGA

Upstream 100 bases:

>100_bases
CATAAGGCGCGCTGCGTCATGCGTCATGAAGCAGCCAGCCCAGCGCAGAGGACGCGGCACGAGCACAGAGAACTGCCTGC
ATCTGTCTGAAGATTGCACA

Downstream 100 bases:

>100_bases
GTGCGCCTGGAATCAGCGCCGGGTGCGCGTGCTAGCTTCGCGCACATCATGAAAGGCAGTGACCTCCGGGAAGGCGTCGT
TCGCGTGTTGAGCCGGGATC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSGMNVTLEHARALDALARHGTFTAAAEALRKGHTAVMYALRTLEAQTELTLLDRRGYRTRLTPAGERILEHCRKLLAAE
RELEAACAEIRAGWEPALRIVFDGIFPAEPLLRVLKELRAEGASTRFHVSAEFLSGVEAAFVREEANLMVTLLPPTVPGL
RTYRLPELKAILVAHRGHPLARRRGPLKDEDLAEHLVLTVRGSDPRLQLSTGELEARSTVHLNDFAAKKAAILEGLGFGW
LPEYMATRELRRGELKALKLAGDATHAFRPQLHHHSGIPLGRAARRIVQALTETESTS

Sequences:

>Translated_298_residues
MSGMNVTLEHARALDALARHGTFTAAAEALRKGHTAVMYALRTLEAQTELTLLDRRGYRTRLTPAGERILEHCRKLLAAE
RELEAACAEIRAGWEPALRIVFDGIFPAEPLLRVLKELRAEGASTRFHVSAEFLSGVEAAFVREEANLMVTLLPPTVPGL
RTYRLPELKAILVAHRGHPLARRRGPLKDEDLAEHLVLTVRGSDPRLQLSTGELEARSTVHLNDFAAKKAAILEGLGFGW
LPEYMATRELRRGELKALKLAGDATHAFRPQLHHHSGIPLGRAARRIVQALTETESTS
>Mature_297_residues
SGMNVTLEHARALDALARHGTFTAAAEALRKGHTAVMYALRTLEAQTELTLLDRRGYRTRLTPAGERILEHCRKLLAAER
ELEAACAEIRAGWEPALRIVFDGIFPAEPLLRVLKELRAEGASTRFHVSAEFLSGVEAAFVREEANLMVTLLPPTVPGLR
TYRLPELKAILVAHRGHPLARRRGPLKDEDLAEHLVLTVRGSDPRLQLSTGELEARSTVHLNDFAAKKAAILEGLGFGWL
PEYMATRELRRGELKALKLAGDATHAFRPQLHHHSGIPLGRAARRIVQALTETESTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=271, Percent_Identity=30.6273062730627, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1789492, Length=272, Percent_Identity=30.1470588235294, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1787949, Length=255, Percent_Identity=29.0196078431373, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786713, Length=252, Percent_Identity=25.7936507936508, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1786508, Length=245, Percent_Identity=23.6734693877551, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32948; Mature: 32816

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGMNVTLEHARALDALARHGTFTAAAEALRKGHTAVMYALRTLEAQTELTLLDRRGYRT
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCCE
RLTPAGERILEHCRKLLAAERELEAACAEIRAGWEPALRIVFDGIFPAEPLLRVLKELRA
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHC
EGASTRFHVSAEFLSGVEAAFVREEANLMVTLLPPTVPGLRTYRLPELKAILVAHRGHPL
CCCCCEEEEEHHHHCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCH
ARRRGPLKDEDLAEHLVLTVRGSDPRLQLSTGELEARSTVHLNDFAAKKAAILEGLGFGW
HHHCCCCCHHHHHHHEEEEEECCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHHHCCCCC
LPEYMATRELRRGELKALKLAGDATHAFRPQLHHHSGIPLGRAARRIVQALTETESTS
HHHHHHHHHHHCCCHHEEEECCCCCHHHCCCHHCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SGMNVTLEHARALDALARHGTFTAAAEALRKGHTAVMYALRTLEAQTELTLLDRRGYRT
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCCE
RLTPAGERILEHCRKLLAAERELEAACAEIRAGWEPALRIVFDGIFPAEPLLRVLKELRA
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHC
EGASTRFHVSAEFLSGVEAAFVREEANLMVTLLPPTVPGLRTYRLPELKAILVAHRGHPL
CCCCCEEEEEHHHHCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCH
ARRRGPLKDEDLAEHLVLTVRGSDPRLQLSTGELEARSTVHLNDFAAKKAAILEGLGFGW
HHHCCCCCHHHHHHHEEEEEECCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHHHCCCCC
LPEYMATRELRRGELKALKLAGDATHAFRPQLHHHSGIPLGRAARRIVQALTETESTS
HHHHHHHHHHHCCCHHEEEECCCCCHHHCCCHHCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]