| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758093
Identifier: 108758093
GI number: 108758093
Start: 4865667
End: 4868267
Strand: Reverse
Name: 108758093
Synonym: MXAN_3995
Alternate gene names: NA
Gene position: 4868267-4865667 (Counterclockwise)
Preceding gene: 108758405
Following gene: 108756854
Centisome position: 53.26
GC content: 63.4
Gene sequence:
>2601_bases GTGGTGGTGGTCAGACGACCTGGGAGCCGTGCCCATGAAGGGGGAAGGGTGATGGCGGACACAGCCGTTGCTTCACAGTC ACATGCTGGCGGCGAGCGCTTCGAGCTTCGGCGTGAACCGGGAGCCGAGGGCGTCTTCTATCTCGTCGCGGTGGCCCCCA CGGAGCTCAAGCTCTCCCTGAAGAGCCACCGGGCCGCTCAGGACAGGATTGCCTTCATCCTGGAGGGAACGCACAAGAAC CTGCCGGCTGACACGGTCTGCAGCGTTCTGATCAAGACGCACGCGCGTGGGATGCCAGCGCGGGAGTACACGCTGGTCAA CGTCCCACTGCGTGTCAATGGCAGGTCATGCACCTTGGAGTTCGAGGCGGACATCTACGAGGCGAGCTTCTTCGGCCGGG GCCACGCGGAGATGACCGTCATTCCTGACTTCCCCTTCGCGCAGGAATGCTGCCTCGAAAAGCCCTTTGAGTTCGACATC CCCTTGGGGCTCAGGGGGCTCGACCTGAGCGTCCCTGTCCTGTTTGGCCGGCGGTTCCGCTTGAAGCCGGACATGGATGC ACGTTTCACCGGCGCGACGCTTCGGCTCTCCATCTACCACTCCGTGGAGCCGAAGCGTGGCGTGGCGCCGAGGATGGCTC CAGAGGCGCAGCGCTATGCCGCGCTGGAATGGGGCGCTTCCGACTTGGGCGCGAAGGACTGGAGAGTTGGCTGCGCCTGG AGTGGGGACGGTCTCCGACTGCCATGGCGTGAGCCCATTCAGGGCGAGTACGCCTTCGACCTGCGGCTCGAAGTGCTCCG AGACATCGAGGGGGAGACGCGGCCCTACGTGGTGTGGGATCAGCCAAGGGCATGCGTGTGCCCGAAGCCGAAGCTGACCG GGTTCGAATTCAAGCACCACGCGGTCACCGCGACGGTGGAGCATCTGGATCCGGATTTCGAGCTCCCCTTGGAGCTGACC CATTGGCGGTACGAGGCTCAGACGCGAGGAGAGGCCCTGTCCTTCACCCTGATGGACCCCGTCTCGCGGCCGGTGTTGGT GAACGCCAACGAGAGGGGCCTGTTCCTACGGCAATTCCTCGACGCTGAGGACTGGCTGCGCCGGAAGAGCTTCGCCTTGT TGCGGATTCCGCGCTCGTTGACGGGGTCCGATGAATACGTGCCCATCCGCTCGGTGCTGGACTTCGATGAGACACAATTC CTCGCGTTCGAGGACGAGGACCTGTGGCTGGAGGCCCCAGCGTCGGCCAGGGCTCCCTCGCGACAGAAGCAGGACCGGGT GCGCCAGGAGTTGGTGACGGCACTGGCCTCCAAGGAATTGGCGGTCCGGCCTTCGCGCATGCCTCGCTTCGGGGACGTCT GGCTGGGGGCTCGCGACAACCACCTGCTCATCACCGTGAAGGTCATCGGGGATCTCGACTACTGGCGTGAGGCCTCGCCT GTCTTTTCGCTCTGCGACGACCAGCGTCCCGTGGAGCCAACGGTCTCTCGGGAGGCCGAGGTGCTTCGGTTGGATGCGCG GCCCCTTGATGGGAATCCTCGTTACTACGAGGCGCTCGTTCGATTCGACGATCCTCGAATCCGCCAGAAGGTCTTCATCC AGGGGCGAGTCTCAAAACCGGATGCACGGCTCTGGGACGAATTGGTGGCAGCGCCACCGGCCTTCTTCGTGGAGTACCCA GGCGTTCCCCAACTCCAGGGACTTCGCGCCGAGTTCGTCCAGCTCACGGATGATACGTCCATCCTGGAAGTCCGCTGTCA GGCCCTCCACGTTCCCAATGGAAAGGAGGGGGATGTCATCGAGTTCCGCCTGTATGAGTTCTTCGCTGACGTCGCGGAGC CCGTTGTCTTCGGTGCCGTGCCCTTCCGGTATGAGGTCGCGAAGGGGGCGGCGGGGCAATGCGACGCTCGTGGACGGGTG GTGGCGCGTCTCCGGGAGCCGGCGCTCGTCGAGCGGATGCGGCGCAAGGGCCAGTTTCGGATTGAAGCGCGCCTGGTGGA GCGGGCGAATGCCAACCACTCGAGCGCGCTTCCTGCCATCCACCTGGACCTGGAGGGAACACCGCGCCGCATCGAAGGAA CGCTCATCTACGGCAGCCACCCGAATGTGACGGAGGCATTCCGGAGGAAGGTGCTGATCATCGCCGAGCAACTGGAGATG AATGCCGATGATTTGATGGCGTGCATGGCCTTTGAGACAGGCAATGCCTTCCGGGCAGATACACCGAACCGGGCTGGGCA TCAGGCTTTCGGTCTCATTCAGTTCACGGCCATCAACGAAGGAAAAGATGCGCTCGACATCAAGCTGTCCGCACTGGTGC GGATGAGCGCTGTCGAACAGCTCGACTACGTCGCCAAGTACTTCCGCATGTGGAAGGCGCGGTCGAAGCTGCCTCTAGAC AATCTGGGTGATGTCTACGCGTGCATCCTCTGTCCAGAAGCGCTCGGCAAGGACGCGTCCTTCGTCTGTTACGCCAAGGG GTCGAGGGGCTACGAACCCAACAAGGGGTTGGACCGCGGTGGCAAGGGCTTCATCACCAAGGCAGACATCTTGGTTCCGG TGGAGCGGCACCTTCGTGAAGGCCAGAAGTTCCGCAAATAG
Upstream 100 bases:
>100_bases TTCATCAGAACGACGCGGACCTTGCTCGGGAGCTGAAGCTCTCGTTGCCCGAGCGGATCGTGCCCCGAGTACACGACGAC GTGCGGATTCGCCCCAATCT
Downstream 100 bases:
>100_bases AGACGTCTCCTTCAGGTGACAGCATGTTTCTCCATCCTTGTCTGAAAGACGGGTTGCGCGAGTACATTGTCCTCGCGCTC CATGAGGGGCTGCCCAACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 866; Mature: 866
Protein sequence:
>866_residues MVVVRRPGSRAHEGGRVMADTAVASQSHAGGERFELRREPGAEGVFYLVAVAPTELKLSLKSHRAAQDRIAFILEGTHKN LPADTVCSVLIKTHARGMPAREYTLVNVPLRVNGRSCTLEFEADIYEASFFGRGHAEMTVIPDFPFAQECCLEKPFEFDI PLGLRGLDLSVPVLFGRRFRLKPDMDARFTGATLRLSIYHSVEPKRGVAPRMAPEAQRYAALEWGASDLGAKDWRVGCAW SGDGLRLPWREPIQGEYAFDLRLEVLRDIEGETRPYVVWDQPRACVCPKPKLTGFEFKHHAVTATVEHLDPDFELPLELT HWRYEAQTRGEALSFTLMDPVSRPVLVNANERGLFLRQFLDAEDWLRRKSFALLRIPRSLTGSDEYVPIRSVLDFDETQF LAFEDEDLWLEAPASARAPSRQKQDRVRQELVTALASKELAVRPSRMPRFGDVWLGARDNHLLITVKVIGDLDYWREASP VFSLCDDQRPVEPTVSREAEVLRLDARPLDGNPRYYEALVRFDDPRIRQKVFIQGRVSKPDARLWDELVAAPPAFFVEYP GVPQLQGLRAEFVQLTDDTSILEVRCQALHVPNGKEGDVIEFRLYEFFADVAEPVVFGAVPFRYEVAKGAAGQCDARGRV VARLREPALVERMRRKGQFRIEARLVERANANHSSALPAIHLDLEGTPRRIEGTLIYGSHPNVTEAFRRKVLIIAEQLEM NADDLMACMAFETGNAFRADTPNRAGHQAFGLIQFTAINEGKDALDIKLSALVRMSAVEQLDYVAKYFRMWKARSKLPLD NLGDVYACILCPEALGKDASFVCYAKGSRGYEPNKGLDRGGKGFITKADILVPVERHLREGQKFRK
Sequences:
>Translated_866_residues MVVVRRPGSRAHEGGRVMADTAVASQSHAGGERFELRREPGAEGVFYLVAVAPTELKLSLKSHRAAQDRIAFILEGTHKN LPADTVCSVLIKTHARGMPAREYTLVNVPLRVNGRSCTLEFEADIYEASFFGRGHAEMTVIPDFPFAQECCLEKPFEFDI PLGLRGLDLSVPVLFGRRFRLKPDMDARFTGATLRLSIYHSVEPKRGVAPRMAPEAQRYAALEWGASDLGAKDWRVGCAW SGDGLRLPWREPIQGEYAFDLRLEVLRDIEGETRPYVVWDQPRACVCPKPKLTGFEFKHHAVTATVEHLDPDFELPLELT HWRYEAQTRGEALSFTLMDPVSRPVLVNANERGLFLRQFLDAEDWLRRKSFALLRIPRSLTGSDEYVPIRSVLDFDETQF LAFEDEDLWLEAPASARAPSRQKQDRVRQELVTALASKELAVRPSRMPRFGDVWLGARDNHLLITVKVIGDLDYWREASP VFSLCDDQRPVEPTVSREAEVLRLDARPLDGNPRYYEALVRFDDPRIRQKVFIQGRVSKPDARLWDELVAAPPAFFVEYP GVPQLQGLRAEFVQLTDDTSILEVRCQALHVPNGKEGDVIEFRLYEFFADVAEPVVFGAVPFRYEVAKGAAGQCDARGRV VARLREPALVERMRRKGQFRIEARLVERANANHSSALPAIHLDLEGTPRRIEGTLIYGSHPNVTEAFRRKVLIIAEQLEM NADDLMACMAFETGNAFRADTPNRAGHQAFGLIQFTAINEGKDALDIKLSALVRMSAVEQLDYVAKYFRMWKARSKLPLD NLGDVYACILCPEALGKDASFVCYAKGSRGYEPNKGLDRGGKGFITKADILVPVERHLREGQKFRK >Mature_866_residues MVVVRRPGSRAHEGGRVMADTAVASQSHAGGERFELRREPGAEGVFYLVAVAPTELKLSLKSHRAAQDRIAFILEGTHKN LPADTVCSVLIKTHARGMPAREYTLVNVPLRVNGRSCTLEFEADIYEASFFGRGHAEMTVIPDFPFAQECCLEKPFEFDI PLGLRGLDLSVPVLFGRRFRLKPDMDARFTGATLRLSIYHSVEPKRGVAPRMAPEAQRYAALEWGASDLGAKDWRVGCAW SGDGLRLPWREPIQGEYAFDLRLEVLRDIEGETRPYVVWDQPRACVCPKPKLTGFEFKHHAVTATVEHLDPDFELPLELT HWRYEAQTRGEALSFTLMDPVSRPVLVNANERGLFLRQFLDAEDWLRRKSFALLRIPRSLTGSDEYVPIRSVLDFDETQF LAFEDEDLWLEAPASARAPSRQKQDRVRQELVTALASKELAVRPSRMPRFGDVWLGARDNHLLITVKVIGDLDYWREASP VFSLCDDQRPVEPTVSREAEVLRLDARPLDGNPRYYEALVRFDDPRIRQKVFIQGRVSKPDARLWDELVAAPPAFFVEYP GVPQLQGLRAEFVQLTDDTSILEVRCQALHVPNGKEGDVIEFRLYEFFADVAEPVVFGAVPFRYEVAKGAAGQCDARGRV VARLREPALVERMRRKGQFRIEARLVERANANHSSALPAIHLDLEGTPRRIEGTLIYGSHPNVTEAFRRKVLIIAEQLEM NADDLMACMAFETGNAFRADTPNRAGHQAFGLIQFTAINEGKDALDIKLSALVRMSAVEQLDYVAKYFRMWKARSKLPLD NLGDVYACILCPEALGKDASFVCYAKGSRGYEPNKGLDRGGKGFITKADILVPVERHLREGQKFRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97712; Mature: 97712
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVVRRPGSRAHEGGRVMADTAVASQSHAGGERFELRREPGAEGVFYLVAVAPTELKLSL CEEEECCCCCCCCCCEEEEEHHHHCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEEH KSHRAAQDRIAFILEGTHKNLPADTVCSVLIKTHARGMPAREYTLVNVPLRVNGRSCTLE HHCCCHHCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEEE FEADIYEASFFGRGHAEMTVIPDFPFAQECCLEKPFEFDIPLGLRGLDLSVPVLFGRRFR EECCEEEEEECCCCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCEECEEEECCEEE LKPDMDARFTGATLRLSIYHSVEPKRGVAPRMAPEAQRYAALEWGASDLGAKDWRVGCAW CCCCCCCEECCEEEEEEEEECCCCCCCCCCCCCCCHHHHEEEECCCCCCCCCCCEEEEEE SGDGLRLPWREPIQGEYAFDLRLEVLRDIEGETRPYVVWDQPRACVCPKPKLTGFEFKHH CCCCCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCCEEEECCCCEEECCCCCCCCEEEECC AVTATVEHLDPDFELPLELTHWRYEAQTRGEALSFTLMDPVSRPVLVNANERGLFLRQFL EEEEEHHHCCCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCEEEECCCCCHHHHHHC DAEDWLRRKSFALLRIPRSLTGSDEYVPIRSVLDFDETQFLAFEDEDLWLEAPASARAPS CHHHHHHHHCEEEEECCCCCCCCCCCEEHHHHHCCCCCEEEEEECCCEEEECCCCCCCCC RQKQDRVRQELVTALASKELAVRPSRMPRFGDVWLGARDNHLLITVKVIGDLDYWREASP HHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEECCCCCEEEEEEEEECCCHHHHCCCC VFSLCDDQRPVEPTVSREAEVLRLDARPLDGNPRYYEALVRFDDPRIRQKVFIQGRVSKP HHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHEEHEEECCCCHHCEEEEEEECCCCC DARLWDELVAAPPAFFVEYPGVPQLQGLRAEFVQLTDDTSILEVRCQALHVPNGKEGDVI HHHHHHHHHHCCCEEEEECCCCCCCCCCHHHEEEECCCCCEEEEEEEEEECCCCCCCCEE EFRLYEFFADVAEPVVFGAVPFRYEVAKGAAGQCDARGRVVARLREPALVERMRRKGQFR EEHHHHHHHHHHCHHEECCCCCEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCEE IEARLVERANANHSSALPAIHLDLEGTPRRIEGTLIYGSHPNVTEAFRRKVLIIAEQLEM EEEEHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCHHHHHHCEEEEEEHHHCC NADDLMACMAFETGNAFRADTPNRAGHQAFGLIQFTAINEGKDALDIKLSALVRMSAVEQ CHHHHEEEEEEECCCEEECCCCCCCCCCEEEEEEEEEECCCCCCEEEHHHHHHHHHHHHH LDYVAKYFRMWKARSKLPLDNLGDVYACILCPEALGKDASFVCYAKGSRGYEPNKGLDRG HHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHCCCCCEEEEECCCCCCCCCCCCCCC GKGFITKADILVPVERHLREGQKFRK CCCEEEECEEEEEHHHHHHHHHHHCC >Mature Secondary Structure MVVVRRPGSRAHEGGRVMADTAVASQSHAGGERFELRREPGAEGVFYLVAVAPTELKLSL CEEEECCCCCCCCCCEEEEEHHHHCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEEH KSHRAAQDRIAFILEGTHKNLPADTVCSVLIKTHARGMPAREYTLVNVPLRVNGRSCTLE HHCCCHHCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEEE FEADIYEASFFGRGHAEMTVIPDFPFAQECCLEKPFEFDIPLGLRGLDLSVPVLFGRRFR EECCEEEEEECCCCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCEECEEEECCEEE LKPDMDARFTGATLRLSIYHSVEPKRGVAPRMAPEAQRYAALEWGASDLGAKDWRVGCAW CCCCCCCEECCEEEEEEEEECCCCCCCCCCCCCCCHHHHEEEECCCCCCCCCCCEEEEEE SGDGLRLPWREPIQGEYAFDLRLEVLRDIEGETRPYVVWDQPRACVCPKPKLTGFEFKHH CCCCCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCCEEEECCCCEEECCCCCCCCEEEECC AVTATVEHLDPDFELPLELTHWRYEAQTRGEALSFTLMDPVSRPVLVNANERGLFLRQFL EEEEEHHHCCCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCEEEECCCCCHHHHHHC DAEDWLRRKSFALLRIPRSLTGSDEYVPIRSVLDFDETQFLAFEDEDLWLEAPASARAPS CHHHHHHHHCEEEEECCCCCCCCCCCEEHHHHHCCCCCEEEEEECCCEEEECCCCCCCCC RQKQDRVRQELVTALASKELAVRPSRMPRFGDVWLGARDNHLLITVKVIGDLDYWREASP HHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEECCCCCEEEEEEEEECCCHHHHCCCC VFSLCDDQRPVEPTVSREAEVLRLDARPLDGNPRYYEALVRFDDPRIRQKVFIQGRVSKP HHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHEEHEEECCCCHHCEEEEEEECCCCC DARLWDELVAAPPAFFVEYPGVPQLQGLRAEFVQLTDDTSILEVRCQALHVPNGKEGDVI HHHHHHHHHHCCCEEEEECCCCCCCCCCHHHEEEECCCCCEEEEEEEEEECCCCCCCCEE EFRLYEFFADVAEPVVFGAVPFRYEVAKGAAGQCDARGRVVARLREPALVERMRRKGQFR EEHHHHHHHHHHCHHEECCCCCEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCEE IEARLVERANANHSSALPAIHLDLEGTPRRIEGTLIYGSHPNVTEAFRRKVLIIAEQLEM EEEEHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCHHHHHHCEEEEEEHHHCC NADDLMACMAFETGNAFRADTPNRAGHQAFGLIQFTAINEGKDALDIKLSALVRMSAVEQ CHHHHEEEEEEECCCEEECCCCCCCCCCEEEEEEEEEECCCCCCEEEHHHHHHHHHHHHH LDYVAKYFRMWKARSKLPLDNLGDVYACILCPEALGKDASFVCYAKGSRGYEPNKGLDRG HHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHCCCCCEEEEECCCCCCCCCCCCCCC GKGFITKADILVPVERHLREGQKFRK CCCEEEECEEEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA