| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is ydjH [C]
Identifier: 108757998
GI number: 108757998
Start: 877841
End: 878677
Strand: Reverse
Name: ydjH [C]
Synonym: MXAN_0768
Alternate gene names: 108757998
Gene position: 878677-877841 (Counterclockwise)
Preceding gene: 108758649
Following gene: 108761441
Centisome position: 9.61
GC content: 69.06
Gene sequence:
>837_bases ATGGGTGACGCGTCCCTGCGCGATGTGCTGGTGGTGGGGAGCTACTGCCACGACCTGCTCCGGCATGGCCCCGGGCGGGA AACACATGCGCTCGGCGGGTCGGCGGCGTACATCGCGTCCGTCCTGGATGCGATGGGGCTGGAGTACGCGGTGGCCGCGG TGGCCGGCGAGGACTTCCGTTACGCGGACCAGGTCCGGCATCCGCCGCGCATCGTTCCGGGAACGCGCACCACGCAGTTC ATCGCGGACTTCGAGGGAGAGGCACGGACGCTTCGCGTCAGCGCGAAGGCGGAGCCGATTCGCCCTGCGGACATCACCGT GGACGCACGCGTGGCACTGGCGTGCGGGGTGGCGGGTGAGGTGCTGCCGGAGACGCTGCTCCATGTCTCTGAGCGGGCGC GGCATGTGCTGGCGGATGCACAGGGGTTGATTCGGGCGCTCGATGATGACGGACGGGTGCTCAATCTCCGCCTGGAGGAC ACGCCTTTCGCGGGGCTGCTGGAGCGGCTTCGGGTGCTGAAGGCCAGCGAGGAAGAAGCCCGGGCAATGGACATCGAGCG GGTACGTCAGCGGACGTGCCTGGTGGTGACGCGTGGGGCGCGGGGCTGCACGGTGTTCACGGCGGATGCGCGCATCGACG TGCCCACGGTTGCGGTGGAGGAAGTGGATGCCACGGGCGCGGGGGACTGCTTCATCGCGGGCTTCACGCTGGGGTTGCTG CGAGGACTGCCGTTCGAACGCTGCGCCGCGCTGGCGAACTGGTTTGGCGCGCAGGCGGTGACGCAGGTGGGTGTGCCGAA GCTGGATGTCAGCCGGCTTCCAACGGAACTGCGATAA
Upstream 100 bases:
>100_bases GATGGCCGGCGCTGGTGGATTCTCAACATCGCCTGGACGGACGACAAGGCCGCGGGGGTTCCCGTGCCGAAGGACTTCAC CCGGAAGTAGAACGCGCGCC
Downstream 100 bases:
>100_bases GCAGCATTCAATGAAAAGCCAGAACACTGTTACGCCCTTGGGATGTGTGCTCGTAAGCCTTGCCCTGGGATGTTCCAGTG GCGCGCACTCCACCGGGAGA
Product: PfkB family kinase
Products: ADP; D-ribose 5-phosphate
Alternate protein names: Ribokinase-Like Domain-Containing Protein; Carbohydrate Kinase Pfkb Family; PfkB Family Kinase; Carbohydrate Kinase PfkB
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MGDASLRDVLVVGSYCHDLLRHGPGRETHALGGSAAYIASVLDAMGLEYAVAAVAGEDFRYADQVRHPPRIVPGTRTTQF IADFEGEARTLRVSAKAEPIRPADITVDARVALACGVAGEVLPETLLHVSERARHVLADAQGLIRALDDDGRVLNLRLED TPFAGLLERLRVLKASEEEARAMDIERVRQRTCLVVTRGARGCTVFTADARIDVPTVAVEEVDATGAGDCFIAGFTLGLL RGLPFERCAALANWFGAQAVTQVGVPKLDVSRLPTELR
Sequences:
>Translated_278_residues MGDASLRDVLVVGSYCHDLLRHGPGRETHALGGSAAYIASVLDAMGLEYAVAAVAGEDFRYADQVRHPPRIVPGTRTTQF IADFEGEARTLRVSAKAEPIRPADITVDARVALACGVAGEVLPETLLHVSERARHVLADAQGLIRALDDDGRVLNLRLED TPFAGLLERLRVLKASEEEARAMDIERVRQRTCLVVTRGARGCTVFTADARIDVPTVAVEEVDATGAGDCFIAGFTLGLL RGLPFERCAALANWFGAQAVTQVGVPKLDVSRLPTELR >Mature_277_residues GDASLRDVLVVGSYCHDLLRHGPGRETHALGGSAAYIASVLDAMGLEYAVAAVAGEDFRYADQVRHPPRIVPGTRTTQFI ADFEGEARTLRVSAKAEPIRPADITVDARVALACGVAGEVLPETLLHVSERARHVLADAQGLIRALDDDGRVLNLRLEDT PFAGLLERLRVLKASEEEARAMDIERVRQRTCLVVTRGARGCTVFTADARIDVPTVAVEEVDATGAGDCFIAGFTLGLLR GLPFERCAALANWFGAQAVTQVGVPKLDVSRLPTELR
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.15
Molecular weight: Translated: 29877; Mature: 29746
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDASLRDVLVVGSYCHDLLRHGPGRETHALGGSAAYIASVLDAMGLEYAVAAVAGEDFR CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCH YADQVRHPPRIVPGTRTTQFIADFEGEARTLRVSAKAEPIRPADITVDARVALACGVAGE HHHHCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCEEECHHHHHHHCCHHH VLPETLLHVSERARHVLADAQGLIRALDDDGRVLNLRLEDTPFAGLLERLRVLKASEEEA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHH RAMDIERVRQRTCLVVTRGARGCTVFTADARIDVPTVAVEEVDATGAGDCFIAGFTLGLL HHHHHHHHHCCEEEEEECCCCCCEEEEECCEECCCEEEHHHCCCCCCCCHHHHHHHHHHH RGLPFERCAALANWFGAQAVTQVGVPKLDVSRLPTELR HCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCC >Mature Secondary Structure GDASLRDVLVVGSYCHDLLRHGPGRETHALGGSAAYIASVLDAMGLEYAVAAVAGEDFR CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCH YADQVRHPPRIVPGTRTTQFIADFEGEARTLRVSAKAEPIRPADITVDARVALACGVAGE HHHHCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCEEECHHHHHHHCCHHH VLPETLLHVSERARHVLADAQGLIRALDDDGRVLNLRLEDTPFAGLLERLRVLKASEEEA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHH RAMDIERVRQRTCLVVTRGARGCTVFTADARIDVPTVAVEEVDATGAGDCFIAGFTLGLL HHHHHHHHHCCEEEEEECCCCCCEEEEECCEECCCEEEHHHCCCCCCCCHHHHHHHHHHH RGLPFERCAALANWFGAQAVTQVGVPKLDVSRLPTELR HCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; D-ribose
Specific reaction: ATP + D-ribose = ADP + D-ribose 5-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA