Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is ydjH [C]

Identifier: 108757998

GI number: 108757998

Start: 877841

End: 878677

Strand: Reverse

Name: ydjH [C]

Synonym: MXAN_0768

Alternate gene names: 108757998

Gene position: 878677-877841 (Counterclockwise)

Preceding gene: 108758649

Following gene: 108761441

Centisome position: 9.61

GC content: 69.06

Gene sequence:

>837_bases
ATGGGTGACGCGTCCCTGCGCGATGTGCTGGTGGTGGGGAGCTACTGCCACGACCTGCTCCGGCATGGCCCCGGGCGGGA
AACACATGCGCTCGGCGGGTCGGCGGCGTACATCGCGTCCGTCCTGGATGCGATGGGGCTGGAGTACGCGGTGGCCGCGG
TGGCCGGCGAGGACTTCCGTTACGCGGACCAGGTCCGGCATCCGCCGCGCATCGTTCCGGGAACGCGCACCACGCAGTTC
ATCGCGGACTTCGAGGGAGAGGCACGGACGCTTCGCGTCAGCGCGAAGGCGGAGCCGATTCGCCCTGCGGACATCACCGT
GGACGCACGCGTGGCACTGGCGTGCGGGGTGGCGGGTGAGGTGCTGCCGGAGACGCTGCTCCATGTCTCTGAGCGGGCGC
GGCATGTGCTGGCGGATGCACAGGGGTTGATTCGGGCGCTCGATGATGACGGACGGGTGCTCAATCTCCGCCTGGAGGAC
ACGCCTTTCGCGGGGCTGCTGGAGCGGCTTCGGGTGCTGAAGGCCAGCGAGGAAGAAGCCCGGGCAATGGACATCGAGCG
GGTACGTCAGCGGACGTGCCTGGTGGTGACGCGTGGGGCGCGGGGCTGCACGGTGTTCACGGCGGATGCGCGCATCGACG
TGCCCACGGTTGCGGTGGAGGAAGTGGATGCCACGGGCGCGGGGGACTGCTTCATCGCGGGCTTCACGCTGGGGTTGCTG
CGAGGACTGCCGTTCGAACGCTGCGCCGCGCTGGCGAACTGGTTTGGCGCGCAGGCGGTGACGCAGGTGGGTGTGCCGAA
GCTGGATGTCAGCCGGCTTCCAACGGAACTGCGATAA

Upstream 100 bases:

>100_bases
GATGGCCGGCGCTGGTGGATTCTCAACATCGCCTGGACGGACGACAAGGCCGCGGGGGTTCCCGTGCCGAAGGACTTCAC
CCGGAAGTAGAACGCGCGCC

Downstream 100 bases:

>100_bases
GCAGCATTCAATGAAAAGCCAGAACACTGTTACGCCCTTGGGATGTGTGCTCGTAAGCCTTGCCCTGGGATGTTCCAGTG
GCGCGCACTCCACCGGGAGA

Product: PfkB family kinase

Products: ADP; D-ribose 5-phosphate

Alternate protein names: Ribokinase-Like Domain-Containing Protein; Carbohydrate Kinase Pfkb Family; PfkB Family Kinase; Carbohydrate Kinase PfkB

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MGDASLRDVLVVGSYCHDLLRHGPGRETHALGGSAAYIASVLDAMGLEYAVAAVAGEDFRYADQVRHPPRIVPGTRTTQF
IADFEGEARTLRVSAKAEPIRPADITVDARVALACGVAGEVLPETLLHVSERARHVLADAQGLIRALDDDGRVLNLRLED
TPFAGLLERLRVLKASEEEARAMDIERVRQRTCLVVTRGARGCTVFTADARIDVPTVAVEEVDATGAGDCFIAGFTLGLL
RGLPFERCAALANWFGAQAVTQVGVPKLDVSRLPTELR

Sequences:

>Translated_278_residues
MGDASLRDVLVVGSYCHDLLRHGPGRETHALGGSAAYIASVLDAMGLEYAVAAVAGEDFRYADQVRHPPRIVPGTRTTQF
IADFEGEARTLRVSAKAEPIRPADITVDARVALACGVAGEVLPETLLHVSERARHVLADAQGLIRALDDDGRVLNLRLED
TPFAGLLERLRVLKASEEEARAMDIERVRQRTCLVVTRGARGCTVFTADARIDVPTVAVEEVDATGAGDCFIAGFTLGLL
RGLPFERCAALANWFGAQAVTQVGVPKLDVSRLPTELR
>Mature_277_residues
GDASLRDVLVVGSYCHDLLRHGPGRETHALGGSAAYIASVLDAMGLEYAVAAVAGEDFRYADQVRHPPRIVPGTRTTQFI
ADFEGEARTLRVSAKAEPIRPADITVDARVALACGVAGEVLPETLLHVSERARHVLADAQGLIRALDDDGRVLNLRLEDT
PFAGLLERLRVLKASEEEARAMDIERVRQRTCLVVTRGARGCTVFTADARIDVPTVAVEEVDATGAGDCFIAGFTLGLLR
GLPFERCAALANWFGAQAVTQVGVPKLDVSRLPTELR

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.1.15

Molecular weight: Translated: 29877; Mature: 29746

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDASLRDVLVVGSYCHDLLRHGPGRETHALGGSAAYIASVLDAMGLEYAVAAVAGEDFR
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCH
YADQVRHPPRIVPGTRTTQFIADFEGEARTLRVSAKAEPIRPADITVDARVALACGVAGE
HHHHCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCEEECHHHHHHHCCHHH
VLPETLLHVSERARHVLADAQGLIRALDDDGRVLNLRLEDTPFAGLLERLRVLKASEEEA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHH
RAMDIERVRQRTCLVVTRGARGCTVFTADARIDVPTVAVEEVDATGAGDCFIAGFTLGLL
HHHHHHHHHCCEEEEEECCCCCCEEEEECCEECCCEEEHHHCCCCCCCCHHHHHHHHHHH
RGLPFERCAALANWFGAQAVTQVGVPKLDVSRLPTELR
HCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCC
>Mature Secondary Structure 
GDASLRDVLVVGSYCHDLLRHGPGRETHALGGSAAYIASVLDAMGLEYAVAAVAGEDFR
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCH
YADQVRHPPRIVPGTRTTQFIADFEGEARTLRVSAKAEPIRPADITVDARVALACGVAGE
HHHHCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCEEECHHHHHHHCCHHH
VLPETLLHVSERARHVLADAQGLIRALDDDGRVLNLRLEDTPFAGLLERLRVLKASEEEA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHH
RAMDIERVRQRTCLVVTRGARGCTVFTADARIDVPTVAVEEVDATGAGDCFIAGFTLGLL
HHHHHHHHHCCEEEEEECCCCCCEEEEECCEECCCEEEHHHCCCCCCCCHHHHHHHHHHH
RGLPFERCAALANWFGAQAVTQVGVPKLDVSRLPTELR
HCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; D-ribose

Specific reaction: ATP + D-ribose = ADP + D-ribose 5-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA