Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is 108757952

Identifier: 108757952

GI number: 108757952

Start: 2764551

End: 2765213

Strand: Direct

Name: 108757952

Synonym: MXAN_2378

Alternate gene names: NA

Gene position: 2764551-2765213 (Clockwise)

Preceding gene: 108761463

Following gene: 108757648

Centisome position: 30.25

GC content: 65.16

Gene sequence:

>663_bases
ATGACCTCACCCAACTTCATTCCTTCAACGAAGCCGCTTCCCTTCGAGCTGCACCCGTCCTCCATCCAGGGCCAGGGTGC
CTTCGCCATCCGCCGCATCCGCAAGGGCACGCGCATCATCGAGTACCTCGGTGAGCGCATCACGCAGGCGGAAGCGGACG
TCCGCTACGACGACGAATCGATGGCGCGGCACCACACGTTCCTGTTCAACCTCGACAAGAGGACGGTGCTGGACGCGGGG
ACGATTCACAACGAGGCGCGCTACATCAACCACTCGTGCGCGCCCAACTGCGAAGCCCTCATCGAAAAGGGCCACATCTA
CATCTACGCGCTCACCTCCATCGAGCCCGGTGAGGAGCTGGTGTACGACTACGGCTACGAGCGCACCGAGGACATGGGGC
CCGAAGCCGAGGCGCTCTACGTCTGCCGCTGCGGCGCGCCCAATTGCCGGGGCACCATCCTGGCCCCGGCGAAGAAGGCG
CCGGCCCGGAAGACGTCGGCCAAGAAGGCGAAGACTTCGTCGACGTCGAGAAAGAAGTCTGCGTCGAAATCCCGGGGCAA
CAAGGGCGCGGGGGGCAAGAAGGCGGCGGGGAAGAAGTCATCCGCCGGTACCCGCAAGTCCACCCAGCGGGCGAAGTCGC
CCAGCCGTAAGCGCGCGAGCTGA

Upstream 100 bases:

>100_bases
ATCATCGTTCGCCTTTCATCGGAAGTCGGACTGGTGCACGCTACACCGCCGCAGCCGGAGCGTCCTGGCCGACATCAACA
CCTGGGGCGCTCACAACAGA

Downstream 100 bases:

>100_bases
ACTGTGCACAGGTTCCGGCGCCCTCCCAAGGAGGGCGCCGCTTACCGGCTGTTCGTGCCGTGATGGTGCTGGGCACGTAT
GGGGCTGCTCATTGACGGTG

Product: SET domain-containing protein

Products: NA

Alternate protein names: Histone-Lysine N-Methyltransferase; SET Domain-Containing Protein; SET Domain Protein; Set Domain Protein; HistoNe-Lysine N-Methyltransferase H3 Lysine-4 Specific; Setd1a Protein; Nuclear Protein Set; Zinc Finger Protein

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTSPNFIPSTKPLPFELHPSSIQGQGAFAIRRIRKGTRIIEYLGERITQAEADVRYDDESMARHHTFLFNLDKRTVLDAG
TIHNEARYINHSCAPNCEALIEKGHIYIYALTSIEPGEELVYDYGYERTEDMGPEAEALYVCRCGAPNCRGTILAPAKKA
PARKTSAKKAKTSSTSRKKSASKSRGNKGAGGKKAAGKKSSAGTRKSTQRAKSPSRKRAS

Sequences:

>Translated_220_residues
MTSPNFIPSTKPLPFELHPSSIQGQGAFAIRRIRKGTRIIEYLGERITQAEADVRYDDESMARHHTFLFNLDKRTVLDAG
TIHNEARYINHSCAPNCEALIEKGHIYIYALTSIEPGEELVYDYGYERTEDMGPEAEALYVCRCGAPNCRGTILAPAKKA
PARKTSAKKAKTSSTSRKKSASKSRGNKGAGGKKAAGKKSSAGTRKSTQRAKSPSRKRAS
>Mature_219_residues
TSPNFIPSTKPLPFELHPSSIQGQGAFAIRRIRKGTRIIEYLGERITQAEADVRYDDESMARHHTFLFNLDKRTVLDAGT
IHNEARYINHSCAPNCEALIEKGHIYIYALTSIEPGEELVYDYGYERTEDMGPEAEALYVCRCGAPNCRGTILAPAKKAP
ARKTSAKKAKTSSTSRKKSASKSRGNKGAGGKKAAGKKSSAGTRKSTQRAKSPSRKRAS

Specific function: Unknown

COG id: COG2940

COG function: function code R; Proteins containing SET domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI210032580, Length=141, Percent_Identity=37.5886524822695, Blast_Score=97, Evalue=9e-21,
Organism=Homo sapiens, GI56550039, Length=138, Percent_Identity=39.1304347826087, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI110349788, Length=167, Percent_Identity=33.5329341317365, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI55741677, Length=141, Percent_Identity=35.4609929078014, Blast_Score=87, Evalue=8e-18,
Organism=Homo sapiens, GI7662046, Length=138, Percent_Identity=39.8550724637681, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI224465233, Length=179, Percent_Identity=32.4022346368715, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI19913358, Length=137, Percent_Identity=36.4963503649635, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI19913350, Length=137, Percent_Identity=36.4963503649635, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI19913348, Length=137, Percent_Identity=36.4963503649635, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI109633019, Length=137, Percent_Identity=36.4963503649635, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI19923586, Length=145, Percent_Identity=34.4827586206897, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI27477095, Length=145, Percent_Identity=34.4827586206897, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI91718902, Length=138, Percent_Identity=40.5797101449275, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI23510384, Length=122, Percent_Identity=40.1639344262295, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI21361095, Length=122, Percent_Identity=40.1639344262295, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI156142197, Length=148, Percent_Identity=33.7837837837838, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI156142199, Length=148, Percent_Identity=33.7837837837838, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI13699811, Length=171, Percent_Identity=32.1637426900585, Blast_Score=75, Evalue=3e-14,
Organism=Homo sapiens, GI19923202, Length=122, Percent_Identity=40.1639344262295, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI13375930, Length=156, Percent_Identity=29.4871794871795, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI301171597, Length=156, Percent_Identity=29.4871794871795, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI197313748, Length=136, Percent_Identity=30.8823529411765, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI301171588, Length=153, Percent_Identity=29.4117647058824, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI148762969, Length=138, Percent_Identity=36.9565217391304, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17565204, Length=204, Percent_Identity=30.8823529411765, Blast_Score=85, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17552318, Length=141, Percent_Identity=37.5886524822695, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17552316, Length=141, Percent_Identity=37.5886524822695, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17552320, Length=141, Percent_Identity=37.5886524822695, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI193210440, Length=139, Percent_Identity=38.8489208633094, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI71993684, Length=203, Percent_Identity=30.5418719211823, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193202392, Length=148, Percent_Identity=30.4054054054054, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI25141373, Length=148, Percent_Identity=30.4054054054054, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6321911, Length=147, Percent_Identity=41.4965986394558, Blast_Score=100, Evalue=1e-22,
Organism=Drosophila melanogaster, GI28571451, Length=135, Percent_Identity=42.2222222222222, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24639197, Length=135, Percent_Identity=42.2222222222222, Blast_Score=96, Evalue=1e-20,
Organism=Drosophila melanogaster, GI19550184, Length=138, Percent_Identity=36.231884057971, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI17136556, Length=138, Percent_Identity=36.231884057971, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI62472551, Length=138, Percent_Identity=36.231884057971, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI17136558, Length=138, Percent_Identity=36.231884057971, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI19550181, Length=138, Percent_Identity=36.231884057971, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI17737643, Length=136, Percent_Identity=35.2941176470588, Blast_Score=87, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24647050, Length=151, Percent_Identity=36.4238410596026, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI281360813, Length=136, Percent_Identity=38.2352941176471, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24641786, Length=136, Percent_Identity=38.2352941176471, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI221331070, Length=122, Percent_Identity=42.6229508196721, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24662251, Length=122, Percent_Identity=42.6229508196721, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24650756, Length=162, Percent_Identity=32.0987654320988, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI18543183, Length=165, Percent_Identity=30.3030303030303, Blast_Score=68, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24135; Mature: 24003

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS50280 SET ; PS50868 POST_SET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MTSPNFIPSTKPLPFELHPSSIQGQGAFAIRRIRKGTRIIEYLGERITQAEADVRYDDES
CCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
MARHHTFLFNLDKRTVLDAGTIHNEARYINHSCAPNCEALIEKGHIYIYALTSIEPGEEL
HHHHEEEEEECCCHHEECCCCCCCHHHHHCCCCCCCHHHHHHCCCEEEEEECCCCCCHHH
VYDYGYERTEDMGPEAEALYVCRCGAPNCRGTILAPAKKAPARKTSAKKAKTSSTSRKKS
HHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHCCHHHHHH
ASKSRGNKGAGGKKAAGKKSSAGTRKSTQRAKSPSRKRAS
HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TSPNFIPSTKPLPFELHPSSIQGQGAFAIRRIRKGTRIIEYLGERITQAEADVRYDDES
CCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
MARHHTFLFNLDKRTVLDAGTIHNEARYINHSCAPNCEALIEKGHIYIYALTSIEPGEEL
HHHHEEEEEECCCHHEECCCCCCCHHHHHCCCCCCCHHHHHHCCCEEEEEECCCCCCHHH
VYDYGYERTEDMGPEAEALYVCRCGAPNCRGTILAPAKKAPARKTSAKKAKTSSTSRKKS
HHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHCCHHHHHH
ASKSRGNKGAGGKKAAGKKSSAGTRKSTQRAKSPSRKRAS
HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA