| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757949
Identifier: 108757949
GI number: 108757949
Start: 5120154
End: 5121956
Strand: Reverse
Name: 108757949
Synonym: MXAN_4170
Alternate gene names: NA
Gene position: 5121956-5120154 (Counterclockwise)
Preceding gene: 108762019
Following gene: 108757546
Centisome position: 56.04
GC content: 67.78
Gene sequence:
>1803_bases TTGCAGTCTACCCGCGAGGAGTCCCCCATGAAGCAGTCCTCCAAGAAGTTTCCAGGCGTGTTGCGCACCTGGTCTGGCGT CGTCGCCGCATCCCTGCTCGCAGGGTGTGGTGGCTCCGAATCCCTCTCATCGGAGGAGCCGGCGGCCGCGGCGCAGGAGC AGGCGCAGACGGGCGCCGCGCCCATCCTCGATTCGATGGATGCCATCGCGCTCGACGGCGAGCTGACGTCGAAGACGCGC AGCCTCATCCGCGCGAAGCTCGCGCAGGGGCAGGTGCATCAGCAGGTTCCGGTGGTGTCGGACTCGGGGCAGGCGCTCGT GCTGAACGACCAGGGCCTCGATGGTGACGAGCAGGCCGGTGACGGCGTGTTCTCCGCCATTGGCGACGTGGACTTCGTCA CCCACCGCGCCACGCAGGACCGCATTCGCGAGTTCCAGGAACGCAATCCCCAGACGCCGCTGACGGTCGCGACCTTCGAC AACCGCGTCCGTGTCTCCGAGCGCGTCCTCACGCCGCTGTCGCCCGACGTCTTCCGGCCGGGTGTCCCCATCCCCATCTT CCCCGCGGGCATCTCCCACGCGGTGAAGCCGGAGAACTCGCTCATCATCACCCACCCCAACGTGGTCAATGACCCGACGC GCACGTATGACCCGTGCACGAACGCCGGCAACCCGAATGGTGTGTGGACGTTCAACCACCTGATGCGGGAGATGGCGAGC TCGTACGTGTCGCCAGCAAACCTGACGGAGCACTGGCTGCGTCAGTGGACCGTGAACCAGAACATCAACGGCTGGACGGT GCCGGCGCGCCCGGCGATGACCGCGCGAATCCTCACGCCGTGGCCGCGCTCGAGCGGCGCGCTGGAGCTGGCGCGGTCGC CGTTCAAGCTGGTGGCCATCGTCAACCGCCTGGACCTGGGCGCCAGCGCGGGGCCGTCCGCCTACGCTTCTGGTAACGCG GGCGAGCTGCGCTTCGTCTTCGCCGCGGTGGATCGTTCGAGCGGGACCTGTGGCGTGCGGCCCTTCCTGGTCATCTTCGA GTACGGTGTCCCGCACGCCAGCTGTGACGCGGTCCGCACCTGGGCGCAGGGGTGGCTGAACCTGTCGGCGCCGTCCATGA TTCTGGGCAGCTCCGCGTACAATGCGGCGCTGACGAGCCTCACGCAGCAGGTGGTGGTGCGCAACGCCGCGCCCCGCAAG CCGAACGGCAGCGCCATCAACCAGATCCGCACCAACGAGGAGTGGCTGCGCTACCCGTGGGAGCTGCGTGAGTTTCACCT GATGGGCTCGGGTCCCTCGGTGAACCGCCTGCAGGGCCAGCCGACGGTGCTGACGCCGGGTGATTCGCACAACAACACGA CGGTGCTGCGTGACTTCATCAACGCGAACACGCCCGCCATCCTGGCCAACAGCTACACCGTGCCGCCGACGTACCCCACG TCGAGCACGCCGTTCCTCGGCGCGTTCCCGTGGATTTCGTCGCCGACGGACTCGTACTGGCGTGCGTCGGGCATCTCCGT CAACGACGCCCGTCACGTCTTCTCGCGCAACACCTGCAACGGCTGCCACGGCCGCGAAACGCGCACCGAGTTCACGCACA TCGACGAGTACGGCGCGCTTTCGCCGTTCCTCGCCACGGGCATGGCCAGTCCTTCCACGGCCTTCTGGGTGCAGGACCCC GTCGTGACGTCGCTGAGCCGTCCGTTCTACGAAATCCAGATGCGCAACACGAACCTGGACAGCGTGGCGAACCAGGCCTG CCTGGCGCGCGCGTTCGACCGGCCTCTGCTCTCCGCGCACTGA
Upstream 100 bases:
>100_bases CGCTGTGGCGTGATTTGTCATTGCCACCAGCGGCGGCGCACGCGCCGCGCTTGAAGGCGTTGAAAGGGGACTCTGGCCTG CGGGGTGCACAAGGCCGCGT
Downstream 100 bases:
>100_bases CGCGGGGAAGCCCGACCGGGGCGCATCGATTCAACGGTGCGCCCCAGGGGGGGGGCCGAGGCCACTACATGAGCGGCGTC GGGAGGACGGTCAGCGGCGG
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 600; Mature: 600
Protein sequence:
>600_residues MQSTREESPMKQSSKKFPGVLRTWSGVVAASLLAGCGGSESLSSEEPAAAAQEQAQTGAAPILDSMDAIALDGELTSKTR SLIRAKLAQGQVHQQVPVVSDSGQALVLNDQGLDGDEQAGDGVFSAIGDVDFVTHRATQDRIREFQERNPQTPLTVATFD NRVRVSERVLTPLSPDVFRPGVPIPIFPAGISHAVKPENSLIITHPNVVNDPTRTYDPCTNAGNPNGVWTFNHLMREMAS SYVSPANLTEHWLRQWTVNQNINGWTVPARPAMTARILTPWPRSSGALELARSPFKLVAIVNRLDLGASAGPSAYASGNA GELRFVFAAVDRSSGTCGVRPFLVIFEYGVPHASCDAVRTWAQGWLNLSAPSMILGSSAYNAALTSLTQQVVVRNAAPRK PNGSAINQIRTNEEWLRYPWELREFHLMGSGPSVNRLQGQPTVLTPGDSHNNTTVLRDFINANTPAILANSYTVPPTYPT SSTPFLGAFPWISSPTDSYWRASGISVNDARHVFSRNTCNGCHGRETRTEFTHIDEYGALSPFLATGMASPSTAFWVQDP VVTSLSRPFYEIQMRNTNLDSVANQACLARAFDRPLLSAH
Sequences:
>Translated_600_residues MQSTREESPMKQSSKKFPGVLRTWSGVVAASLLAGCGGSESLSSEEPAAAAQEQAQTGAAPILDSMDAIALDGELTSKTR SLIRAKLAQGQVHQQVPVVSDSGQALVLNDQGLDGDEQAGDGVFSAIGDVDFVTHRATQDRIREFQERNPQTPLTVATFD NRVRVSERVLTPLSPDVFRPGVPIPIFPAGISHAVKPENSLIITHPNVVNDPTRTYDPCTNAGNPNGVWTFNHLMREMAS SYVSPANLTEHWLRQWTVNQNINGWTVPARPAMTARILTPWPRSSGALELARSPFKLVAIVNRLDLGASAGPSAYASGNA GELRFVFAAVDRSSGTCGVRPFLVIFEYGVPHASCDAVRTWAQGWLNLSAPSMILGSSAYNAALTSLTQQVVVRNAAPRK PNGSAINQIRTNEEWLRYPWELREFHLMGSGPSVNRLQGQPTVLTPGDSHNNTTVLRDFINANTPAILANSYTVPPTYPT SSTPFLGAFPWISSPTDSYWRASGISVNDARHVFSRNTCNGCHGRETRTEFTHIDEYGALSPFLATGMASPSTAFWVQDP VVTSLSRPFYEIQMRNTNLDSVANQACLARAFDRPLLSAH >Mature_600_residues MQSTREESPMKQSSKKFPGVLRTWSGVVAASLLAGCGGSESLSSEEPAAAAQEQAQTGAAPILDSMDAIALDGELTSKTR SLIRAKLAQGQVHQQVPVVSDSGQALVLNDQGLDGDEQAGDGVFSAIGDVDFVTHRATQDRIREFQERNPQTPLTVATFD NRVRVSERVLTPLSPDVFRPGVPIPIFPAGISHAVKPENSLIITHPNVVNDPTRTYDPCTNAGNPNGVWTFNHLMREMAS SYVSPANLTEHWLRQWTVNQNINGWTVPARPAMTARILTPWPRSSGALELARSPFKLVAIVNRLDLGASAGPSAYASGNA GELRFVFAAVDRSSGTCGVRPFLVIFEYGVPHASCDAVRTWAQGWLNLSAPSMILGSSAYNAALTSLTQQVVVRNAAPRK PNGSAINQIRTNEEWLRYPWELREFHLMGSGPSVNRLQGQPTVLTPGDSHNNTTVLRDFINANTPAILANSYTVPPTYPT SSTPFLGAFPWISSPTDSYWRASGISVNDARHVFSRNTCNGCHGRETRTEFTHIDEYGALSPFLATGMASPSTAFWVQDP VVTSLSRPFYEIQMRNTNLDSVANQACLARAFDRPLLSAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65091; Mature: 65091
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSTREESPMKQSSKKFPGVLRTWSGVVAASLLAGCGGSESLSSEEPAAAAQEQAQTGAA CCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCC PILDSMDAIALDGELTSKTRSLIRAKLAQGQVHQQVPVVSDSGQALVLNDQGLDGDEQAG HHHHCCCCEEECCCHHHHHHHHHHHHHHHCHHHHCCCEEECCCCEEEEECCCCCCCCHHC DGVFSAIGDVDFVTHRATQDRIREFQERNPQTPLTVATFDNRVRVSERVLTPLSPDVFRP CHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEHHHHHCCCCCCHHCCC GVPIPIFPAGISHAVKPENSLIITHPNVVNDPTRTYDPCTNAGNPNGVWTFNHLMREMAS CCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHH SYVSPANLTEHWLRQWTVNQNINGWTVPARPAMTARILTPWPRSSGALELARSPFKLVAI HHCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCEEEEECCCCCCCCCHHHHCCCHHHHHH VNRLDLGASAGPSAYASGNAGELRFVFAAVDRSSGTCGVRPFLVIFEYGVPHASCDAVRT HHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHH WAQGWLNLSAPSMILGSSAYNAALTSLTQQVVVRNAAPRKPNGSAINQIRTNEEWLRYPW HHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHCCC ELREFHLMGSGPSVNRLQGQPTVLTPGDSHNNTTVLRDFINANTPAILANSYTVPPTYPT EEEEEEEECCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCCEEEECCEECCCCCCC SSTPFLGAFPWISSPTDSYWRASGISVNDARHVFSRNTCNGCHGRETRTEFTHIDEYGAL CCCCCEEECCCCCCCCCCHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHCCC SPFLATGMASPSTAFWVQDPVVTSLSRPFYEIQMRNTNLDSVANQACLARAFDRPLLSAH CHHHHHCCCCCCCEEEECCHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQSTREESPMKQSSKKFPGVLRTWSGVVAASLLAGCGGSESLSSEEPAAAAQEQAQTGAA CCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCC PILDSMDAIALDGELTSKTRSLIRAKLAQGQVHQQVPVVSDSGQALVLNDQGLDGDEQAG HHHHCCCCEEECCCHHHHHHHHHHHHHHHCHHHHCCCEEECCCCEEEEECCCCCCCCHHC DGVFSAIGDVDFVTHRATQDRIREFQERNPQTPLTVATFDNRVRVSERVLTPLSPDVFRP CHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEHHHHHCCCCCCHHCCC GVPIPIFPAGISHAVKPENSLIITHPNVVNDPTRTYDPCTNAGNPNGVWTFNHLMREMAS CCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHH SYVSPANLTEHWLRQWTVNQNINGWTVPARPAMTARILTPWPRSSGALELARSPFKLVAI HHCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCEEEEECCCCCCCCCHHHHCCCHHHHHH VNRLDLGASAGPSAYASGNAGELRFVFAAVDRSSGTCGVRPFLVIFEYGVPHASCDAVRT HHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHH WAQGWLNLSAPSMILGSSAYNAALTSLTQQVVVRNAAPRKPNGSAINQIRTNEEWLRYPW HHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHCCC ELREFHLMGSGPSVNRLQGQPTVLTPGDSHNNTTVLRDFINANTPAILANSYTVPPTYPT EEEEEEEECCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCCEEEECCEECCCCCCC SSTPFLGAFPWISSPTDSYWRASGISVNDARHVFSRNTCNGCHGRETRTEFTHIDEYGAL CCCCCEEECCCCCCCCCCHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHCCC SPFLATGMASPSTAFWVQDPVVTSLSRPFYEIQMRNTNLDSVANQACLARAFDRPLLSAH CHHHHHCCCCCCCEEEECCHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA