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The map label for this gene is nusB

Identifier: 108757895

GI number: 108757895

Start: 5963471

End: 5963893

Strand: Reverse

Name: nusB

Synonym: MXAN_4761

Alternate gene names: 108757895

Gene position: 5963893-5963471 (Counterclockwise)

Preceding gene: 108759881

Following gene: 108762582

Centisome position: 65.25

GC content: 65.25

Gene sequence:

>423_bases
ATGGGCGCGCGAAGAACGGGACGTGAGCGTGCGCTGCAGGCGCTCTACCAGTTGGAGATGGCCACCGCGACGACGGCGGA
GGCGCTGGAGTCAGCCTGGTCGGCCGCCGAGGAGAGCAACAAGCGGGACCCGGACGCGGTGAAGTTCGCCCGGGAACTGG
TGGAAGGTGTGCAGTCCCACCGGGACGAAATCGACCAGCTCATTGAGCGGCACAGCCACAACTGGCGCCTGGACCGCATG
TCGCGCATCGACCGGAACGTGCTGCGACTGGGCATTTTCGAGCTGAAGTACCGCCCGGACATCCCCCGCAAGGTGTCCAT
CAACGAGGCGGTGGAGCTGGGCAAGAACTTCGGCAATGAAGAATCGAGCGCGTTCGTCAACGGGCTCCTGGACCGCGTCG
CGGTCGCCTTGAACAAGCCGTGA

Upstream 100 bases:

>100_bases
GAAGGCTGGGAACAAGGGAGCGGAGGCCACACTGGCCTGCATCGAGATGGTCAATCTGTACGCGAAGATGTCAGCGACGG
ACGGAAGGAAGGCGTAGGCC

Downstream 100 bases:

>100_bases
GCCGCTGACGCCAGCCGCGAGGGACGCGCCGTGAGCCAGACGACGACGCACGACATCGGATTGGAGGGCCTGGACACGCT
CGGCGGGGTGGACGCGCTCT

Product: transcription antitermination factor NusB

Products: NA

Alternate protein names: Protein nusB

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MGARRTGRERALQALYQLEMATATTAEALESAWSAAEESNKRDPDAVKFARELVEGVQSHRDEIDQLIERHSHNWRLDRM
SRIDRNVLRLGIFELKYRPDIPRKVSINEAVELGKNFGNEESSAFVNGLLDRVAVALNKP

Sequences:

>Translated_140_residues
MGARRTGRERALQALYQLEMATATTAEALESAWSAAEESNKRDPDAVKFARELVEGVQSHRDEIDQLIERHSHNWRLDRM
SRIDRNVLRLGIFELKYRPDIPRKVSINEAVELGKNFGNEESSAFVNGLLDRVAVALNKP
>Mature_139_residues
GARRTGRERALQALYQLEMATATTAEALESAWSAAEESNKRDPDAVKFARELVEGVQSHRDEIDQLIERHSHNWRLDRMS
RIDRNVLRLGIFELKYRPDIPRKVSINEAVELGKNFGNEESSAFVNGLLDRVAVALNKP

Specific function: Involved in the transcription termination process

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family

Homologues:

Organism=Escherichia coli, GI1786618, Length=126, Percent_Identity=37.3015873015873, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NUSB_MYXXD (Q1D350)

Other databases:

- EMBL:   CP000113
- RefSeq:   YP_632923.1
- ProteinModelPortal:   Q1D350
- SMR:   Q1D350
- STRING:   Q1D350
- GeneID:   4104834
- GenomeReviews:   CP000113_GR
- KEGG:   mxa:MXAN_4761
- TIGR:   MXAN_4761
- eggNOG:   COG0781
- HOGENOM:   HBG734409
- OMA:   SHNDIAD
- PhylomeDB:   Q1D350
- BioCyc:   MXAN246197:MXAN_4761-MONOMER
- HAMAP:   MF_00073
- InterPro:   IPR011605
- InterPro:   IPR006027
- Gene3D:   G3DSA:1.10.940.10
- TIGRFAMs:   TIGR01951

Pfam domain/function: PF01029 NusB; SSF48013 NusB_RsmB_TIM44

EC number: NA

Molecular weight: Translated: 15930; Mature: 15799

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGARRTGRERALQALYQLEMATATTAEALESAWSAAEESNKRDPDAVKFARELVEGVQSH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RDEIDQLIERHSHNWRLDRMSRIDRNVLRLGIFELKYRPDIPRKVSINEAVELGKNFGNE
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC
ESSAFVNGLLDRVAVALNKP
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GARRTGRERALQALYQLEMATATTAEALESAWSAAEESNKRDPDAVKFARELVEGVQSH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RDEIDQLIERHSHNWRLDRMSRIDRNVLRLGIFELKYRPDIPRKVSINEAVELGKNFGNE
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC
ESSAFVNGLLDRVAVALNKP
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA