| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757759
Identifier: 108757759
GI number: 108757759
Start: 1562541
End: 1564226
Strand: Direct
Name: 108757759
Synonym: MXAN_1333
Alternate gene names: NA
Gene position: 1562541-1564226 (Clockwise)
Preceding gene: 108761247
Following gene: 108759842
Centisome position: 17.1
GC content: 68.56
Gene sequence:
>1686_bases TTGTCGGTCCGTGCTGTGTCACTTGCGCGGTGCTTACAGTCTTCGTGTCACCAGCGCTTGCGTTGTCACCGGGGCCTAAG GTGTAGAATCGGACTGATGCGCGCCCTCACGCGGTCCGTCTGGCTCATTCCCGTGCTCTTGCTGTCGTGTTCCGACGCGG GCCTCTACGCGCTCAATGGCCGTGGCCCTGGCGGGAAGGACCGCGCCAGCTTCGCCGGCACCGTCTGCGTGCCGCTCGCG GGCGGCGAGGCCTTTCCCACGAAGGTGATTTTCGCGCTCCAGGGCGGCGAAGGCGTCGAGCGCGAGGTGGTGGGTTACGC CAACGAGGCGCTGTCCACGCTCTCCAGCCGCTTCTCCGGTCCCTTCGTCCAGTTCGGCCTCGTCGCGTACCACACGGTGG CGACGGGCCTGCTGGGCCGCTTCTCGGATGCGTCCGACTTCCAGGCCGCGCTGCCGCGCTACGCCACCTACCAGGAGTCC GGCCCCGTGAGCGTCCGCGCCGCCCTGCGGCTGGCCAAGACGCTGCTGTCGGGCGACATGCAGACGTCCTGCCGCGGCGA GGTCGCCCGCACGCGCTACGTCATCGTCGTCGTGGTGCGAAGCCAGGACACCAGTTGCGCCAACCCGGCCTTCAACGTGG GGCTCGACTCGCGTTGCAGCGCGCTGGGCAACACGTCGGCGTGCAGCCAGTGTGAGCTCACCGCCGTCACCGGCGAAATC AAGGCGCTGGCCTCGCAGTTCAGCGCGGGCGAAGTGGTGGTGCAGCCCATCTACGTGCGCGGCGAGACGCCAGACCCCAT CACCCGCCAGCACGTGGCCGCCATCGCCAACGCTGGCGGCACCGAGCCGCTGGAGACGGACGCGGCGGGTCTGTCGGGCA CCCTCACCAACATCCAGTACGCCGCGCGGACCAACACCCTCAAGCTCAAGCGCTTCTTCGCCTACAACCGCAACGTGGTG GTGCGCGCCGGGCAGGTGCTCGTCGATAGCGACGGGGACGGCCTTCCCGACGAGGATGAGGCGTTGATGGGCACCGACCC CCTGCGCCAGGACACGGACCAGGACGGGTTGATGGACGGCGTCGAGGTCCGCATGGGCCTGGACCCGCTCCAGCCGGACG TCATCAACGGCTGCAACGTGTCCCTGGACGAGGACGGCGACCGGCTCAACACCTGCGAGGAGCGCGTGCTTGGCACCAAC GCCTGCATCGGTGACACGGATGGGGACGCGCTTCCGGACCTGGTGGAGGCGCTGGTGATGACGAACCCGCTCATCCCCGA GGACCTGCTCGATACGGACCGCGACGGCATCACCAACGTGTCGGAGGTGGAGGCGCACGGAGACCCGCTCAGCGCCGACC TCGACTTCCACCGCGAGCGCGGCTACGGCTACGAATTGGTGGAGACCACGCCCACCGCGGACGGCCGCAGCTGCTACCAG GTGCGCGTGGAGAACGTCACCGTCGTCCCCACCCGCGAGCGGCCACACCCCTTCATCCCGGGCGAAGTCATCAAGGCGGG CACCAACGAGGTGTACCTCTACCTTCAGGCTGGCCGGGACAATGATCCACGGGGCGCGGGCATCGGCTCGCTCCTCATCC AGGAAATCCAATACAGCGAAGAGGGGGGCCGCCTGCCGGCGGGCATCATCCCCCTGGATCCCGATACCTTCATCCCGGGG ACCTGA
Upstream 100 bases:
>100_bases TGCTCACGCTGTAGGCCGTCACCTGGCTGTCCATGCCCGGAGGACACCGGGAGTCACGGCGCCTCCGGGGGGCTCAGCGC CCGTTCCACGGGGGGCCGAA
Downstream 100 bases:
>100_bases AGCCCTCCTTGGATGTGGGGTCCACCCCTCGCCCTCACTGGGGAGTTCCCCCCACACCTTTTGTTCGACGCGTCCCTGCT CGTGCCCAACTCACTGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: Thrombospondin Type 3 Repeat Protein; Thrombospondin Type 3 Repeat-Containing Protein; Mtsb Protein Involved In Cell-Cell Cohesion; AAA ATPase; S-Layer-Like Domain-Containing Protein; Mtsd Protein Involved In Cell-Cell Cohesion; Mtse Protein Involved In Cell-Cell Cohesion; Ig Domain-Containing Protein
Number of amino acids: Translated: 561; Mature: 560
Protein sequence:
>561_residues MSVRAVSLARCLQSSCHQRLRCHRGLRCRIGLMRALTRSVWLIPVLLLSCSDAGLYALNGRGPGGKDRASFAGTVCVPLA GGEAFPTKVIFALQGGEGVEREVVGYANEALSTLSSRFSGPFVQFGLVAYHTVATGLLGRFSDASDFQAALPRYATYQES GPVSVRAALRLAKTLLSGDMQTSCRGEVARTRYVIVVVVRSQDTSCANPAFNVGLDSRCSALGNTSACSQCELTAVTGEI KALASQFSAGEVVVQPIYVRGETPDPITRQHVAAIANAGGTEPLETDAAGLSGTLTNIQYAARTNTLKLKRFFAYNRNVV VRAGQVLVDSDGDGLPDEDEALMGTDPLRQDTDQDGLMDGVEVRMGLDPLQPDVINGCNVSLDEDGDRLNTCEERVLGTN ACIGDTDGDALPDLVEALVMTNPLIPEDLLDTDRDGITNVSEVEAHGDPLSADLDFHRERGYGYELVETTPTADGRSCYQ VRVENVTVVPTRERPHPFIPGEVIKAGTNEVYLYLQAGRDNDPRGAGIGSLLIQEIQYSEEGGRLPAGIIPLDPDTFIPG T
Sequences:
>Translated_561_residues MSVRAVSLARCLQSSCHQRLRCHRGLRCRIGLMRALTRSVWLIPVLLLSCSDAGLYALNGRGPGGKDRASFAGTVCVPLA GGEAFPTKVIFALQGGEGVEREVVGYANEALSTLSSRFSGPFVQFGLVAYHTVATGLLGRFSDASDFQAALPRYATYQES GPVSVRAALRLAKTLLSGDMQTSCRGEVARTRYVIVVVVRSQDTSCANPAFNVGLDSRCSALGNTSACSQCELTAVTGEI KALASQFSAGEVVVQPIYVRGETPDPITRQHVAAIANAGGTEPLETDAAGLSGTLTNIQYAARTNTLKLKRFFAYNRNVV VRAGQVLVDSDGDGLPDEDEALMGTDPLRQDTDQDGLMDGVEVRMGLDPLQPDVINGCNVSLDEDGDRLNTCEERVLGTN ACIGDTDGDALPDLVEALVMTNPLIPEDLLDTDRDGITNVSEVEAHGDPLSADLDFHRERGYGYELVETTPTADGRSCYQ VRVENVTVVPTRERPHPFIPGEVIKAGTNEVYLYLQAGRDNDPRGAGIGSLLIQEIQYSEEGGRLPAGIIPLDPDTFIPG T >Mature_560_residues SVRAVSLARCLQSSCHQRLRCHRGLRCRIGLMRALTRSVWLIPVLLLSCSDAGLYALNGRGPGGKDRASFAGTVCVPLAG GEAFPTKVIFALQGGEGVEREVVGYANEALSTLSSRFSGPFVQFGLVAYHTVATGLLGRFSDASDFQAALPRYATYQESG PVSVRAALRLAKTLLSGDMQTSCRGEVARTRYVIVVVVRSQDTSCANPAFNVGLDSRCSALGNTSACSQCELTAVTGEIK ALASQFSAGEVVVQPIYVRGETPDPITRQHVAAIANAGGTEPLETDAAGLSGTLTNIQYAARTNTLKLKRFFAYNRNVVV RAGQVLVDSDGDGLPDEDEALMGTDPLRQDTDQDGLMDGVEVRMGLDPLQPDVINGCNVSLDEDGDRLNTCEERVLGTNA CIGDTDGDALPDLVEALVMTNPLIPEDLLDTDRDGITNVSEVEAHGDPLSADLDFHRERGYGYELVETTPTADGRSCYQV RVENVTVVPTRERPHPFIPGEVIKAGTNEVYLYLQAGRDNDPRGAGIGSLLIQEIQYSEEGGRLPAGIIPLDPDTFIPGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59955; Mature: 59824
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVRAVSLARCLQSSCHQRLRCHRGLRCRIGLMRALTRSVWLIPVLLLSCSDAGLYALNG CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC RGPGGKDRASFAGTVCVPLAGGEAFPTKVIFALQGGEGVEREVVGYANEALSTLSSRFSG CCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC PFVQFGLVAYHTVATGLLGRFSDASDFQAALPRYATYQESGPVSVRAALRLAKTLLSGDM CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHCCCC QTSCRGEVARTRYVIVVVVRSQDTSCANPAFNVGLDSRCSALGNTSACSQCELTAVTGEI CCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEHHHHH KALASQFSAGEVVVQPIYVRGETPDPITRQHVAAIANAGGTEPLETDAAGLSGTLTNIQY HHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCEEE AARTNTLKLKRFFAYNRNVVVRAGQVLVDSDGDGLPDEDEALMGTDPLRQDTDQDGLMDG ECCCCCEEEEEHHHCCCCEEEEECEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VEVRMGLDPLQPDVINGCNVSLDEDGDRLNTCEERVLGTNACIGDTDGDALPDLVEALVM CCEEECCCCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH TNPLIPEDLLDTDRDGITNVSEVEAHGDPLSADLDFHRERGYGYELVETTPTADGRSCYQ CCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCEEE VRVENVTVVPTRERPHPFIPGEVIKAGTNEVYLYLQAGRDNDPRGAGIGSLLIQEIQYSE EEECCEEEEECCCCCCCCCCHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCC EGGRLPAGIIPLDPDTFIPGT CCCCCCCCEEECCCCCCCCCC >Mature Secondary Structure SVRAVSLARCLQSSCHQRLRCHRGLRCRIGLMRALTRSVWLIPVLLLSCSDAGLYALNG CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC RGPGGKDRASFAGTVCVPLAGGEAFPTKVIFALQGGEGVEREVVGYANEALSTLSSRFSG CCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC PFVQFGLVAYHTVATGLLGRFSDASDFQAALPRYATYQESGPVSVRAALRLAKTLLSGDM CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHCCCC QTSCRGEVARTRYVIVVVVRSQDTSCANPAFNVGLDSRCSALGNTSACSQCELTAVTGEI CCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEHHHHH KALASQFSAGEVVVQPIYVRGETPDPITRQHVAAIANAGGTEPLETDAAGLSGTLTNIQY HHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCEEE AARTNTLKLKRFFAYNRNVVVRAGQVLVDSDGDGLPDEDEALMGTDPLRQDTDQDGLMDG ECCCCCEEEEEHHHCCCCEEEEECEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VEVRMGLDPLQPDVINGCNVSLDEDGDRLNTCEERVLGTNACIGDTDGDALPDLVEALVM CCEEECCCCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH TNPLIPEDLLDTDRDGITNVSEVEAHGDPLSADLDFHRERGYGYELVETTPTADGRSCYQ CCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCEEE VRVENVTVVPTRERPHPFIPGEVIKAGTNEVYLYLQAGRDNDPRGAGIGSLLIQEIQYSE EEECCEEEEECCCCCCCCCCHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCC EGGRLPAGIIPLDPDTFIPGT CCCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA