| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757753
Identifier: 108757753
GI number: 108757753
Start: 4922960
End: 4923967
Strand: Direct
Name: 108757753
Synonym: MXAN_4018
Alternate gene names: NA
Gene position: 4922960-4923967 (Clockwise)
Preceding gene: 108756816
Following gene: 108758998
Centisome position: 53.86
GC content: 70.83
Gene sequence:
>1008_bases ATGAGCCGCTGCCTCCCGCTCTTGTTCACGGCGCTGATGCTGCTCGCTCCGGGCGCCACGCTCGCCCAGGACGCCGGTGA CCCGGAGGTCGCCGCGCTGCGTGCCAGCTTCGAGTACGGCAAGTACGCCGAGGTGATGGACCGCGCGGCCTCGCGCATCG ACCGGGGCGGCCTGGACGAGGACGACCTGGCGGAGCTGCACAAGCTCGCGGGCCTGGCGGCCTTCAACCTGGGCCGCACC GACGACGCCCGCCGTCACCTGCGCGCGCTGCTCCGGTTGGATCCGGACTTCAGCCTGGACCCCTTCGTCGTCCCGCCGCC CGCGGTGGCCTTCTTCGACACGCTCAAGGAGGACATGGACACGGAGCTGGACTTCCTGCGCCAGGAGCGGCGGCTGCGTC AGGAGCGCGAGAAGGCGGAGGCCGAGCGCCGCGAGCGCGAGCGCCTGGAAGCCGAAGTGCAGCGCCGCCGCGCCGAGGAG CTGGCGTCCCAGGTGACGGTGCGCACGGTGGAGAAGCGCAACTTCCTGGTCAACTTCGTCCCCTTCGGTGCCGGCCAGTT CCAGCAGGGCCGCACCAGTCTGGGCATCGTCTTCGCCGCCACCGAAGGGGTGCTGGCGGTGACGAGCATCATCTCCTTCT TCGCCTACGAAGGGCTCTTCGAAGAGCGCACCATCGATCTGGACAACGTGCTGGACCCGGACGGCCGGGCCTCCGTCACC GTGCGCTACATCCCCACCAGCCGGGCCAGGCAGCGCGACGCGTGGCAGTTGCTCAAGCTGTCGTCGGCCGCGGGCTTCTA CGCCATCTACGCCGTGGGCGTGGTGGACGCGCTGTTCCACCACGAGGACCAGGTGGTCCGCAGCACGGTGGAGCCTCGCG CCGAACAACCCGCGGAGCCGTCCCCTCGCTCCACTTCCGCCCGCGCGACGGCACCGAAGACGTACACGCGCGTGGGCCTC TACCCGACCCGCGGCGGACTCGGCGCCGGTCTCACCCTCTCCTTCTGA
Upstream 100 bases:
>100_bases TGGTGGTGGAGGTCTCCCACCCGGGCTACGTGCCGGAGCGCCGGGTGGTCCATCTGCGGCCGGGCGAACCCACCACCCTG CGCGGGAGCCTCCGCCCAGA
Downstream 100 bases:
>100_bases CGGAGACTCCCTCCAGGTACGTGAAGCCATGGCCAGCCTCACCGTCCGCACCCCCGATGGCAAGATCCGCGCAGTCTCCC TGCACAAGCGCCTCACCAGC
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: Tetratricopeptide Repeat Protein
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSRCLPLLFTALMLLAPGATLAQDAGDPEVAALRASFEYGKYAEVMDRAASRIDRGGLDEDDLAELHKLAGLAAFNLGRT DDARRHLRALLRLDPDFSLDPFVVPPPAVAFFDTLKEDMDTELDFLRQERRLRQEREKAEAERRERERLEAEVQRRRAEE LASQVTVRTVEKRNFLVNFVPFGAGQFQQGRTSLGIVFAATEGVLAVTSIISFFAYEGLFEERTIDLDNVLDPDGRASVT VRYIPTSRARQRDAWQLLKLSSAAGFYAIYAVGVVDALFHHEDQVVRSTVEPRAEQPAEPSPRSTSARATAPKTYTRVGL YPTRGGLGAGLTLSF
Sequences:
>Translated_335_residues MSRCLPLLFTALMLLAPGATLAQDAGDPEVAALRASFEYGKYAEVMDRAASRIDRGGLDEDDLAELHKLAGLAAFNLGRT DDARRHLRALLRLDPDFSLDPFVVPPPAVAFFDTLKEDMDTELDFLRQERRLRQEREKAEAERRERERLEAEVQRRRAEE LASQVTVRTVEKRNFLVNFVPFGAGQFQQGRTSLGIVFAATEGVLAVTSIISFFAYEGLFEERTIDLDNVLDPDGRASVT VRYIPTSRARQRDAWQLLKLSSAAGFYAIYAVGVVDALFHHEDQVVRSTVEPRAEQPAEPSPRSTSARATAPKTYTRVGL YPTRGGLGAGLTLSF >Mature_334_residues SRCLPLLFTALMLLAPGATLAQDAGDPEVAALRASFEYGKYAEVMDRAASRIDRGGLDEDDLAELHKLAGLAAFNLGRTD DARRHLRALLRLDPDFSLDPFVVPPPAVAFFDTLKEDMDTELDFLRQERRLRQEREKAEAERRERERLEAEVQRRRAEEL ASQVTVRTVEKRNFLVNFVPFGAGQFQQGRTSLGIVFAATEGVLAVTSIISFFAYEGLFEERTIDLDNVLDPDGRASVTV RYIPTSRARQRDAWQLLKLSSAAGFYAIYAVGVVDALFHHEDQVVRSTVEPRAEQPAEPSPRSTSARATAPKTYTRVGLY PTRGGLGAGLTLSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37279; Mature: 37147
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRCLPLLFTALMLLAPGATLAQDAGDPEVAALRASFEYGKYAEVMDRAASRIDRGGLDE CCCHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCH DDLAELHKLAGLAAFNLGRTDDARRHLRALLRLDPDFSLDPFVVPPPAVAFFDTLKEDMD HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHH TELDFLRQERRLRQEREKAEAERRERERLEAEVQRRRAEELASQVTVRTVEKRNFLVNFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE PFGAGQFQQGRTSLGIVFAATEGVLAVTSIISFFAYEGLFEERTIDLDNVLDPDGRASVT ECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEE VRYIPTSRARQRDAWQLLKLSSAAGFYAIYAVGVVDALFHHEDQVVRSTVEPRAEQPAEP EEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SPRSTSARATAPKTYTRVGLYPTRGGLGAGLTLSF CCCCCCCCCCCCCCHHEECCEECCCCCCCCCEECC >Mature Secondary Structure SRCLPLLFTALMLLAPGATLAQDAGDPEVAALRASFEYGKYAEVMDRAASRIDRGGLDE CCHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCH DDLAELHKLAGLAAFNLGRTDDARRHLRALLRLDPDFSLDPFVVPPPAVAFFDTLKEDMD HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHH TELDFLRQERRLRQEREKAEAERRERERLEAEVQRRRAEELASQVTVRTVEKRNFLVNFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE PFGAGQFQQGRTSLGIVFAATEGVLAVTSIISFFAYEGLFEERTIDLDNVLDPDGRASVT ECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEE VRYIPTSRARQRDAWQLLKLSSAAGFYAIYAVGVVDALFHHEDQVVRSTVEPRAEQPAEP EEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SPRSTSARATAPKTYTRVGLYPTRGGLGAGLTLSF CCCCCCCCCCCCCCHHEECCEECCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA