| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757739
Identifier: 108757739
GI number: 108757739
Start: 6070548
End: 6071156
Strand: Reverse
Name: 108757739
Synonym: MXAN_4851
Alternate gene names: NA
Gene position: 6071156-6070548 (Counterclockwise)
Preceding gene: 108761856
Following gene: 108762440
Centisome position: 66.43
GC content: 67.65
Gene sequence:
>609_bases ATGCCGAAGTCACGTCCCCCATACCCGCCGGAGTTCCGTGAGCGGGTCGTCGAGCTGTTGAAAGCCGGCCGCTCCGGAAA AAGCCTCGCACGAGAGTTCGGCTGCACCGAGCAGAGCATCCGCAACTGGAAGAAGCAGTTGGAGGGTAGTGGCAGTAGCG CTCCCAGCAGCAACGGCGAGAGCAGGCCAGCTCAGAGGGCGAGCAGTGCCGCCTCGGACGAGCGCGCCGAACTCGAGCGG CTGCGGCGCGAGGTGCGGGTGCTGCGTGAGGAGCGTGACATCCTAAAAAAGCTGCGGCCTGGTTCGCGCAGGAATCCGTG GCGACGCCCAAGCGGCGTACCGACTCGTGAAGGCGAACCAGGCCGTCCACAGCATCACGACGCTCTGTCGTGTCCTGGAG GTGTCCGAGAGCGGCTACCACGCATGGCGGACGCGCCTTCCCTCGAAGCGCGCGGTCGCGGACGCGGGCCTCAGCAAGCG CATTCGCGCCATCCACGCGATGAGCGACGGCACCTACGGCGTGCCGCGCATCCACGCCGAACTCGCGGCAGAGGGCGTGC ACATCGGCCGCAAGCGTGTCGCCCGTCTCATGCGGGCAGCGCACCTTGA
Upstream 100 bases:
>100_bases ATCTCTGAGAATCTGTCGTTTGCTGTCGACGCTTGAGTGCTTGTTGTGAAGTTGCCCCGGTTTCGTGGAGTTCCACCCGC TGTGCGAAAAGGGTCCCACG
Downstream 100 bases:
>100_bases GGGCGTCAGTCGCCGCAGGTGGTGCGTCACCACGACGCGCGACGAGCGCGCACGCCCTGCGCCCGACCTGGTCGACCGGA AATTCGTAGCCCCTGGACCC
Product: IS3 family transposase OrfA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MPKSRPPYPPEFRERVVELLKAGRSGKSLAREFGCTEQSIRNWKKQLEGSGSSAPSSNGESRPAQRASSAASDERAELER LRREVRVLREERDILKKLRPGSRRNPWRRPSGVPTREGEPGRPQHHDALSCPGGVRERLPRMADAPSLEARGRGRGPQQA HSRHPRDERRHLRRAAHPRRTRGRGRAHRPQACRPSHAGSAP
Sequences:
>Translated_202_residues MPKSRPPYPPEFRERVVELLKAGRSGKSLAREFGCTEQSIRNWKKQLEGSGSSAPSSNGESRPAQRASSAASDERAELER LRREVRVLREERDILKKLRPGSRRNPWRRPSGVPTREGEPGRPQHHDALSCPGGVRERLPRMADAPSLEARGRGRGPQQA HSRHPRDERRHLRRAAHPRRTRGRGRAHRPQACRPSHAGSAP >Mature_201_residues PKSRPPYPPEFRERVVELLKAGRSGKSLAREFGCTEQSIRNWKKQLEGSGSSAPSSNGESRPAQRASSAASDERAELERL RREVRVLREERDILKKLRPGSRRNPWRRPSGVPTREGEPGRPQHHDALSCPGGVRERLPRMADAPSLEARGRGRGPQQAH SRHPRDERRHLRRAAHPRRTRGRGRAHRPQACRPSHAGSAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22808; Mature: 22677
Theoretical pI: Translated: 12.18; Mature: 12.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKSRPPYPPEFRERVVELLKAGRSGKSLAREFGCTEQSIRNWKKQLEGSGSSAPSSNGE CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC SRPAQRASSAASDERAELERLRREVRVLREERDILKKLRPGSRRNPWRRPSGVPTREGEP CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC GRPQHHDALSCPGGVRERLPRMADAPSLEARGRGRGPQQAHSRHPRDERRHLRRAAHPRR CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCHH TRGRGRAHRPQACRPSHAGSAP HHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PKSRPPYPPEFRERVVELLKAGRSGKSLAREFGCTEQSIRNWKKQLEGSGSSAPSSNGE CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC SRPAQRASSAASDERAELERLRREVRVLREERDILKKLRPGSRRNPWRRPSGVPTREGEP CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC GRPQHHDALSCPGGVRERLPRMADAPSLEARGRGRGPQQAHSRHPRDERRHLRRAAHPRR CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCHH TRGRGRAHRPQACRPSHAGSAP HHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA