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The map label for this gene is ydaM [C]

Identifier: 108757708

GI number: 108757708

Start: 5219956

End: 5221740

Strand: Direct

Name: ydaM [C]

Synonym: MXAN_4257

Alternate gene names: 108757708

Gene position: 5219956-5221740 (Clockwise)

Preceding gene: 108759845

Following gene: 108763958

Centisome position: 57.11

GC content: 71.04

Gene sequence:

>1785_bases
ATGCTCCGCTACGCCCTCATCGCCGAGCCCGACCCACAGCGAGCCGCTGGCCTCTTGTCCCTGATGACGGAGGAAGGCCT
GGAAGGCGTCGTCGCCAAGGATGGAGCGGATGCCCAAGATGTCGTGCGCCAGCGAGGTGCGCCCCTGCTGCTCGTCACGG
ACCTGGCGCTGCCCCGGCTGGACGGCTTCGCGTTGCTGACGTGGCTTCGGGAACAGGAGGACTCCGCCGCAACACAGGTC
GTGGTGGTCACTGCCTTCGACGAGCTCCGCGTCCGCGCATGGCAGCTCAAGGAGGCGCTGGGCATCCATGCGTTGCTCAG
TCGCCGGGCCTCCGCGGAGGTGATGCGAGACACGCTGCGTCGCGTACTCGCAGGGCAGCTCGCACCACAGCCGCCTCCGG
CGGAGGGGGCCGCGGAGCAGGAGCGGCAACGGCTGGCGAGCATCGCGGCCATGCACCTGGTCGACAACGGACCGCCCGAG
GCGGAGCTCCAGCAGCTCGTGAAGGAGGTCGCCCAGGCCTTCGGTGTTCCCGTGGCGCTGCTGACGCTGGTGCTGGGCGA
GCGCCAGTGGTTCAAGGCCCACGTCGGCCTGCCACCCACCCTCGCGAAGGACCGGGGCACGCCGCGCGACTGGGCGTTCT
GTCATCACGTGGTGCAGGGGCGCGAGCCGCTCGTCGTACCGGACGCCCGGCGCCATCCCTACTTTCGTGACAACCCACTG
GTGCGCGACGGCATTGTGGGCAGCTACGCGGGCGCACCGCTGCTGACCTCCACGGGCGAAGTCCTGGGCTCGCTGTGCGT
CATCGACACGCGCCCGCTCGTCTTGGGAGCCGAGGACCTGGCCGCGCTGCGGGAGCTCGCGAACCGTGTCGCGGAGGACC
TGGAACAACGGGCCCGGATGAAACCGGCCACCGGAAAGGCCCCGGCAGAGCCCGCGCTCACGGAAGCGTCGGCCCTGGGA
CTCCTGCGTGATGCGGTGCAGGCCCTGGATGTAGCGGCCCTGGTCGTGGCGCCTGGACGCAAACCCCACGCGTGCAACAC
CGCGATGACGGACCTGCTGGGCCTGCCGCCGGAGCCCTTCCCGGCCATGACGTTCGATGCCTTCTGCCAGCACGTCGCGG
GACTCACCGCGGACCCGGCGAGCACGCTGCGGCAGCTCGACCTGGCCTCCGAATCGTCCCGAGGCCTCCGCCTGACGCTG
GTCCTGGAGCGGCCCCAACCGCACCGGCTGCGCTGGGTGGCCCGGCCCTTCGCCATCCCTGGCGGCATGGCGCAGATGCT
GACGCTCACCGACATCGGACACACCCGGCCAGCCCGTGAGGAGCGGGAGCGGCAGCACCGGGTGGACGCGCTGACGGGAC
TGGTGTCGCGGCGCGCGGGCGAGGAACGAGTGCTGCGCGAGATTGGCCGCTGCCGCAGGGATGGCATGCCCTTCAGCGTG
CTGCTCGCGGACCTGGTGGGACTGGGGCGCATCAACGCGACCCGAGGTTTCGACGCGGGGGACGCCACACTGCGAGACGG
AGCCCGCATCACCGAAGCCCTGGGAGTCCCTGGAGGCTTCGCGGTGCGATGGGAAGGCGGGGCGTTCCTCCTGGCCCTTC
CTGGTGTGGACGCAGCGCGGGCCGAAGCATTGCGGCAGAAGCTGCGCGACACCCCTGGCGCTCCCGATGTGGTGTCCGCC
ACCGTCACCGTCGAGGGTGAGGAAGACCCTCAGGGAACGCTGGCCCGAGCCCAGGCAGCGCTCATCCGGGCCAAGACGGA
GCACCGGCCACTGCGGCTGGCATGA

Upstream 100 bases:

>100_bases
GCACCAGGACTAGCGGATAGCCAAAGAACCGCTCCGGGCGAACCCGCGCCACACGAAGCCTTGAGCCAGGCAGCAGCCGT
GGCAGCATCCCCGCTCCTAC

Downstream 100 bases:

>100_bases
GCCACGCTGGAGCCCTTCACCGCGACGAGGAGCACCGCATGTCGACGCCCGTGCCCGACCGCCTGCGCCTGCCCTTCCAC
TTCGACGCCGCGCCGCGCCA

Product: response regulator

Products: NA

Alternate protein names: Diguanylate Cyclase; GAF Sensor Protein; Multi-Sensor Hybrid Histidine Kinase; GAF Domain-Containing Protein; Signal Transduction Histidine Kinase; Sensor Histidine Kinase; Two-Component Hybrid Sensor And Regulator; GGDEF Domain-Containing Protein; Sensory Box/GGDEF Family Protein; Multi-Sensor Signal Transduction Histidine Kinase; Sensor Protein; Histidine Kinase Response Regulator Hybrid Protein; Diguanylate Cyclase With PAS/PAC Sensor; Histidine Kinase-Response Regulator Hybrid Protein; GGDEF Domain Protein; Diguanylate Cyclase/Phosphodiesterase With GAF Sensor; GAF Sensor Signal Transduction Histidine Kinase; Diguanylate Cyclase With PAS/PAC And GAF Sensors; Two-Component System Sensor Histidine Kinase; Histidine Kinase/Response Regulator Hybrid Protein; GAF Sensor Hybrid Histidine Kinase; GAF Sensor Diguanylate Cyclase; PAS Sensor Protein; GAF Domain/GGDEF Domain/EAL Domain-Containing Protein; Diguanylate Cyclase/Phosphodiesterase; Sensory Histidine Protein Kinase; Two-Component Sensor Histidine Kinase; Phytochrome Sensor Protein; PAS Fold Family; PAS/PAC Sensor Hybrid Histidine Kinase; Signal Transduction Protein; Diguanylate Phosphodiesterase With GAF Sensor; Sensory Transduction Histidine Kinase; Signaling Protein; GGDEF Family Protein; ATPase Histidine Kinase- DNA Gyrase B- And; Response Regulator Receiver Domain Protein; HWE Histidine Kinase; GAF Sensor-Containing Diguanylate Cyclase/Phosphodiesterase; GAF Sensor-Containing Diguanylate Cyclase; Pas/Pac Sensor Protein; GGDEF Domain/EAL Domain-Containing Protein; Stage II Sporulation E Family Protein; GGDEF GAF Signalling Protein; GAF Domain-Containing Sensor Histidine Kinase; Response Regulator; GAF Domain/GGDEF Domain Protein; Two Component System Sensor Protein; Sensory Box Histidine Kinase/Response Regulator; GAF Domain Protein; Anti-Sigma-Factor Antagonist; Adenylate Cyclase; Sensor Histidine Kinase/GAF Domain-Containing Protein; Histidine Kinase Of HWE Family; GGDEF Domain-Containing PAS Signal Transduction Protein; GAF/PAS-Family Sensor Histidine Kinase; Gaf Domain Protein; GAF And Chase3 Sensor Phosphotransfer Protein; FOG GGDEF Domain Protein; Signal Transduction Histidine Kinase-Like Protein; Serine/Threonine Protein Kinase; Circadian Input Kinase A/Phytochrome-Like Protein; Cyclic Diguanylate Phosphodiesterase/Diguanylate Cyclase; Diguanylate-Cyclase; Stage II Sporulation Protein E; Gaf Sensor Signal Transduction Histidine Kinase; Phosphodiesterase; PAS/PAC Sensor Protein; GAF Domain Containing Protein; EAL Domain-Containing Protein; Sensor Kinase Protein

Number of amino acids: Translated: 594; Mature: 594

Protein sequence:

>594_residues
MLRYALIAEPDPQRAAGLLSLMTEEGLEGVVAKDGADAQDVVRQRGAPLLLVTDLALPRLDGFALLTWLREQEDSAATQV
VVVTAFDELRVRAWQLKEALGIHALLSRRASAEVMRDTLRRVLAGQLAPQPPPAEGAAEQERQRLASIAAMHLVDNGPPE
AELQQLVKEVAQAFGVPVALLTLVLGERQWFKAHVGLPPTLAKDRGTPRDWAFCHHVVQGREPLVVPDARRHPYFRDNPL
VRDGIVGSYAGAPLLTSTGEVLGSLCVIDTRPLVLGAEDLAALRELANRVAEDLEQRARMKPATGKAPAEPALTEASALG
LLRDAVQALDVAALVVAPGRKPHACNTAMTDLLGLPPEPFPAMTFDAFCQHVAGLTADPASTLRQLDLASESSRGLRLTL
VLERPQPHRLRWVARPFAIPGGMAQMLTLTDIGHTRPAREERERQHRVDALTGLVSRRAGEERVLREIGRCRRDGMPFSV
LLADLVGLGRINATRGFDAGDATLRDGARITEALGVPGGFAVRWEGGAFLLALPGVDAARAEALRQKLRDTPGAPDVVSA
TVTVEGEEDPQGTLARAQAALIRAKTEHRPLRLA

Sequences:

>Translated_594_residues
MLRYALIAEPDPQRAAGLLSLMTEEGLEGVVAKDGADAQDVVRQRGAPLLLVTDLALPRLDGFALLTWLREQEDSAATQV
VVVTAFDELRVRAWQLKEALGIHALLSRRASAEVMRDTLRRVLAGQLAPQPPPAEGAAEQERQRLASIAAMHLVDNGPPE
AELQQLVKEVAQAFGVPVALLTLVLGERQWFKAHVGLPPTLAKDRGTPRDWAFCHHVVQGREPLVVPDARRHPYFRDNPL
VRDGIVGSYAGAPLLTSTGEVLGSLCVIDTRPLVLGAEDLAALRELANRVAEDLEQRARMKPATGKAPAEPALTEASALG
LLRDAVQALDVAALVVAPGRKPHACNTAMTDLLGLPPEPFPAMTFDAFCQHVAGLTADPASTLRQLDLASESSRGLRLTL
VLERPQPHRLRWVARPFAIPGGMAQMLTLTDIGHTRPAREERERQHRVDALTGLVSRRAGEERVLREIGRCRRDGMPFSV
LLADLVGLGRINATRGFDAGDATLRDGARITEALGVPGGFAVRWEGGAFLLALPGVDAARAEALRQKLRDTPGAPDVVSA
TVTVEGEEDPQGTLARAQAALIRAKTEHRPLRLA
>Mature_594_residues
MLRYALIAEPDPQRAAGLLSLMTEEGLEGVVAKDGADAQDVVRQRGAPLLLVTDLALPRLDGFALLTWLREQEDSAATQV
VVVTAFDELRVRAWQLKEALGIHALLSRRASAEVMRDTLRRVLAGQLAPQPPPAEGAAEQERQRLASIAAMHLVDNGPPE
AELQQLVKEVAQAFGVPVALLTLVLGERQWFKAHVGLPPTLAKDRGTPRDWAFCHHVVQGREPLVVPDARRHPYFRDNPL
VRDGIVGSYAGAPLLTSTGEVLGSLCVIDTRPLVLGAEDLAALRELANRVAEDLEQRARMKPATGKAPAEPALTEASALG
LLRDAVQALDVAALVVAPGRKPHACNTAMTDLLGLPPEPFPAMTFDAFCQHVAGLTADPASTLRQLDLASESSRGLRLTL
VLERPQPHRLRWVARPFAIPGGMAQMLTLTDIGHTRPAREERERQHRVDALTGLVSRRAGEERVLREIGRCRRDGMPFSV
LLADLVGLGRINATRGFDAGDATLRDGARITEALGVPGGFAVRWEGGAFLLALPGVDAARAEALRQKLRDTPGAPDVVSA
TVTVEGEEDPQGTLARAQAALIRAKTEHRPLRLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64031; Mature: 64031

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRYALIAEPDPQRAAGLLSLMTEEGLEGVVAKDGADAQDVVRQRGAPLLLVTDLALPRL
CCEEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCCCEEEEECCCCCCC
DGFALLTWLREQEDSAATQVVVVTAFDELRVRAWQLKEALGIHALLSRRASAEVMRDTLR
CHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVLAGQLAPQPPPAEGAAEQERQRLASIAAMHLVDNGPPEAELQQLVKEVAQAFGVPVAL
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHH
LTLVLGERQWFKAHVGLPPTLAKDRGTPRDWAFCHHVVQGREPLVVPDARRHPYFRDNPL
HHHHHCCHHHHHEECCCCCCHHCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCC
VRDGIVGSYAGAPLLTSTGEVLGSLCVIDTRPLVLGAEDLAALRELANRVAEDLEQRARM
CCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHC
KPATGKAPAEPALTEASALGLLRDAVQALDVAALVVAPGRKPHACNTAMTDLLGLPPEPF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHCCCCCCC
PAMTFDAFCQHVAGLTADPASTLRQLDLASESSRGLRLTLVLERPQPHRLRWVARPFAIP
CCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHEEEECCCCCC
GGMAQMLTLTDIGHTRPAREERERQHRVDALTGLVSRRAGEERVLREIGRCRRDGMPFSV
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHH
LLADLVGLGRINATRGFDAGDATLRDGARITEALGVPGGFAVRWEGGAFLLALPGVDAAR
HHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHCCCCCEEEEECCCEEEEEECCCCHHH
AEALRQKLRDTPGAPDVVSATVTVEGEEDPQGTLARAQAALIRAKTEHRPLRLA
HHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLRYALIAEPDPQRAAGLLSLMTEEGLEGVVAKDGADAQDVVRQRGAPLLLVTDLALPRL
CCEEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCCCEEEEECCCCCCC
DGFALLTWLREQEDSAATQVVVVTAFDELRVRAWQLKEALGIHALLSRRASAEVMRDTLR
CHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVLAGQLAPQPPPAEGAAEQERQRLASIAAMHLVDNGPPEAELQQLVKEVAQAFGVPVAL
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHH
LTLVLGERQWFKAHVGLPPTLAKDRGTPRDWAFCHHVVQGREPLVVPDARRHPYFRDNPL
HHHHHCCHHHHHEECCCCCCHHCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCC
VRDGIVGSYAGAPLLTSTGEVLGSLCVIDTRPLVLGAEDLAALRELANRVAEDLEQRARM
CCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHC
KPATGKAPAEPALTEASALGLLRDAVQALDVAALVVAPGRKPHACNTAMTDLLGLPPEPF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHCCCCCCC
PAMTFDAFCQHVAGLTADPASTLRQLDLASESSRGLRLTLVLERPQPHRLRWVARPFAIP
CCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHEEEECCCCCC
GGMAQMLTLTDIGHTRPAREERERQHRVDALTGLVSRRAGEERVLREIGRCRRDGMPFSV
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHH
LLADLVGLGRINATRGFDAGDATLRDGARITEALGVPGGFAVRWEGGAFLLALPGVDAAR
HHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHCCCCCEEEEECCCEEEEEECCCCHHH
AEALRQKLRDTPGAPDVVSATVTVEGEEDPQGTLARAQAALIRAKTEHRPLRLA
HHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA