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The map label for this gene is yadH [H]

Identifier: 108757697

GI number: 108757697

Start: 636733

End: 637479

Strand: Reverse

Name: yadH [H]

Synonym: MXAN_0553

Alternate gene names: 108757697

Gene position: 637479-636733 (Counterclockwise)

Preceding gene: 108763362

Following gene: 108758235

Centisome position: 6.97

GC content: 64.93

Gene sequence:

>747_bases
ATGAAGACCCTTCTGGCGAAGGAGGTCCGGCGCTTCATGCGCGTGCCGGGGCAAACCGTCCTGTCGCCTCTCATCAGCAC
CACGCTGTATTTCATCGTCTTCGGCGTCTCCATCTCCGGCCGCGTCCAGACGGTGGAAGGCCTGCCGTACCTGCACTTCA
TCGTGCCGGGGCTCGTGTTCCTCGGCATCGCCAACAACGCCTTCCTCAACAGCTCCTCCTCGCTGTTCATCACCAAGATT
CAGGGCACCGTGGTGGACCTGCTGGTGGCGCCGCTGGGGCCCGGTGAGTTGATGGCGGGCTTCATCGGCGGCGCCATGGT
GCGCGGGCTCGTGGTGGGTCTGCTCACCTGGGCCGTGGCCACCTTCTTCACCGGATTCAGCCTGGAGCACGCGGGAGTGG
CCGCGTACTTCCTCATCCTGTCGTCCTACGTCTTCAGCGTGCTGGGCATGCTCGCGGCGGTGTGGGCGGAGAAGTTCGAG
CAGATCAACTTCTTCCCCACCTTCGTCATGCTGCCCCTCACCTTCCTGGGCGGCGTCTTCTATTCCGTGCGCGAGCTGCC
CGCGCCCTGGAACACCGTCAGCCTCTTCAACCCCATGGTCTACATGGTGGAAGGGCTGCGCTACGGCATGCTCGGCCGCA
GCATCTATTCGCCCCTGGGCGCCGGAAGCATCCTCTTCGCCGTCGCCGTGGCGGCCACCGCGCTCACCTACGCCGTCCTG
CGCTCCGGCTACAAGATGAAAGCCTGA

Upstream 100 bases:

>100_bases
CGTGGAGACGCGCCGCTCTCGCATGGAGGACGTGCTCATCGAAATCCTCCGTGGCCGCCCACAGCAGGCCGCCTGAGCCC
TCATCATGAACGTCCTTGGG

Downstream 100 bases:

>100_bases
CTCACCCCGGAAAGCCGGGCAGGCCGCTCACGCCTGCCTGCCTGCTCGCTCCCAACCCTGTGGGGTAATTCGCGACTGAG
CAATTCCCACGAGCTAAGAA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKTLLAKEVRRFMRVPGQTVLSPLISTTLYFIVFGVSISGRVQTVEGLPYLHFIVPGLVFLGIANNAFLNSSSSLFITKI
QGTVVDLLVAPLGPGELMAGFIGGAMVRGLVVGLLTWAVATFFTGFSLEHAGVAAYFLILSSYVFSVLGMLAAVWAEKFE
QINFFPTFVMLPLTFLGGVFYSVRELPAPWNTVSLFNPMVYMVEGLRYGMLGRSIYSPLGAGSILFAVAVAATALTYAVL
RSGYKMKA

Sequences:

>Translated_248_residues
MKTLLAKEVRRFMRVPGQTVLSPLISTTLYFIVFGVSISGRVQTVEGLPYLHFIVPGLVFLGIANNAFLNSSSSLFITKI
QGTVVDLLVAPLGPGELMAGFIGGAMVRGLVVGLLTWAVATFFTGFSLEHAGVAAYFLILSSYVFSVLGMLAAVWAEKFE
QINFFPTFVMLPLTFLGGVFYSVRELPAPWNTVSLFNPMVYMVEGLRYGMLGRSIYSPLGAGSILFAVAVAATALTYAVL
RSGYKMKA
>Mature_248_residues
MKTLLAKEVRRFMRVPGQTVLSPLISTTLYFIVFGVSISGRVQTVEGLPYLHFIVPGLVFLGIANNAFLNSSSSLFITKI
QGTVVDLLVAPLGPGELMAGFIGGAMVRGLVVGLLTWAVATFFTGFSLEHAGVAAYFLILSSYVFSVLGMLAAVWAEKFE
QINFFPTFVMLPLTFLGGVFYSVRELPAPWNTVSLFNPMVYMVEGLRYGMLGRSIYSPLGAGSILFAVAVAATALTYAVL
RSGYKMKA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=248, Percent_Identity=40.3225806451613, Blast_Score=192, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 26796; Mature: 26796

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCCCCC
>Mature Secondary Structure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HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]