| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757671
Identifier: 108757671
GI number: 108757671
Start: 2300379
End: 2302007
Strand: Reverse
Name: 108757671
Synonym: MXAN_1967
Alternate gene names: NA
Gene position: 2302007-2300379 (Counterclockwise)
Preceding gene: 108762923
Following gene: 108761588
Centisome position: 25.19
GC content: 70.78
Gene sequence:
>1629_bases ATGTGGAGGCTGTCCATGCCGATGTCGTCGCTCCTGTCGATGCGCCCCCTGCGGTACGCAATGCTGTCCCTGTCCGTGCT CGCCTTCGCCCCCTCGGCGGTAGCGGCGCCGCCCGCGAAGTCCCTGAAGCCGCGCGCACTCGCCGCCAAGCCCACCGGCC GCGAGCTGGCCGGGGACGCCTACGTGGAGCGCATCGTGGTGAAATTCCACGAAGGCAGCCGGGTGCGCCTGCGCGACCAG CAGTTGGTGGCCCTGTCGTCGGACCGGGACGCCGCGGAGCGCTCGCTGCTGGCCGGACGTGGGCTGGGCGACGCGCGCCT GGAGGCGGACCTGGGCCATGTGACGTCACTGCTGGAGCGCGCGCCCCGCATTGGCGCCATGGCCCGCTTGTTCGACGAAG CCGAGTCCACGCTGGAGGCGCGCAAGGCCTCCGGGGAGCGGCAGAGCGGTGAGCAACTGGCGGACCTGAACCTGTACTTC GAAGTCCCCCTGATGCCGGGCACCACGTCCGAGCGCGTGGCCGACCTGGTCGCCGCGCTCAACGGCCTGGACGGTGTCGA GGTGGCCTACGCCGAGCCGCCCCCCGAGCCGGCCATGGTGAACTTCGGCATGGACGCGGCGGTGCGCAGCCTGCTGGCCG CGGCGGACCTCCCCCCCGTCACACCGCTCTACGAGAGCAACCAGGGCTACCTCAACGCCGCGCCTGGCGGCATCGACGCG AAGTACGCGTGGACGGTCCTTGGCGGCCAGGGGCAGAACGTGAAGGTGGTGGACATCGAGGGCGGGTGGCGCACCACGCA CGAGGACATGCCCGACCTCTTCCACATGGGCGGCACCCAGTACACCGACCAGAGCTGGCGCGACCACGGCACGGCGGTGC TGGGTGAAATCGTGGGCGCGCGCAACGCCTATGGCGTGACGGGCATCGCGCACCAGGCCAAGGCGGGCTACGAGTCCATC GGGGCCCAGAGCACGGCGAGCGCCATCACCAGGGCGGCCACGGCCGCGGGTCTGGGCGGCATCGTCCTCATCGAGCTGCA CGCCCGCGGCCCCTCGGACGGCACGGCGTGCTCGTGCAACACCTCCCAGTGCGACTACATCGCAATGGAGTACTGGCAGG CCAACTACGACGCCATCAAGACGGCCACCGCCAACGGCGTCATCGTCGTGGAAGCGGCGGGCAACGGCAGCGCCGACCTG GATGCGCCCGCGTATGGGAGCGCGTTCAACCGCAACACCCGGGACTCGGGCGCCATCTTCGTGGGTGGCAGTACGGCGAC CACGCGCTTGCCCATGTGCTGGACGAACTTCGGCACCCGCGTGGACGTGCACGGCTGGGGTGAGCGCGTCTACAGCATGG GCTACGGCAACGTGTTCGGCGCCAGCTATGGCGAGGACCAGTTCTACACGTCCAGCTTCAGCGGCACCTCCAGCGCGTCC CCCATCGTGGTGGGCGCCGCCGCCAGCGCGCAGGGCGTGGCCCTGGCCAACGGGCGACGTCTGACCAGCACGCAGATGCG CTCGCTGCTGCGCGCCAACGGCACGCCGCAACCCGCGAACACGCGCCAGATTGGCCCGCTACCGGACCTGGCCAAGGTCC TGCCCAAGGTCATCGCCGGCGACTACTGA
Upstream 100 bases:
>100_bases AGGCTGGCTCCTCATTTCGCGACAGACCAGAAATGCAAGATGCCCGTGTGAACCCGTCCACTGTGCAAGTGGACCCGGGC CACGGCCGTCCCCTCTTCCG
Downstream 100 bases:
>100_bases GCCGGATTCTCGGCACGCCCCCACCTTCCGCGTCAGGACGGGTGGGGGTGCGTTTCCTGGCGGCGAAGTGACTACCGCTC GCCGTAGCGGCGGTGGTCCA
Product: S8 family peptidase
Products: NA
Alternate protein names: Serine Protease; Serine Protease Subtilase Family; S8 Family Peptidase; Fibronectin Type III Domain-Containing Protein; Peptidase S8/S53 Family; Microbial Collagenase
Number of amino acids: Translated: 542; Mature: 542
Protein sequence:
>542_residues MWRLSMPMSSLLSMRPLRYAMLSLSVLAFAPSAVAAPPAKSLKPRALAAKPTGRELAGDAYVERIVVKFHEGSRVRLRDQ QLVALSSDRDAAERSLLAGRGLGDARLEADLGHVTSLLERAPRIGAMARLFDEAESTLEARKASGERQSGEQLADLNLYF EVPLMPGTTSERVADLVAALNGLDGVEVAYAEPPPEPAMVNFGMDAAVRSLLAAADLPPVTPLYESNQGYLNAAPGGIDA KYAWTVLGGQGQNVKVVDIEGGWRTTHEDMPDLFHMGGTQYTDQSWRDHGTAVLGEIVGARNAYGVTGIAHQAKAGYESI GAQSTASAITRAATAAGLGGIVLIELHARGPSDGTACSCNTSQCDYIAMEYWQANYDAIKTATANGVIVVEAAGNGSADL DAPAYGSAFNRNTRDSGAIFVGGSTATTRLPMCWTNFGTRVDVHGWGERVYSMGYGNVFGASYGEDQFYTSSFSGTSSAS PIVVGAAASAQGVALANGRRLTSTQMRSLLRANGTPQPANTRQIGPLPDLAKVLPKVIAGDY
Sequences:
>Translated_542_residues MWRLSMPMSSLLSMRPLRYAMLSLSVLAFAPSAVAAPPAKSLKPRALAAKPTGRELAGDAYVERIVVKFHEGSRVRLRDQ QLVALSSDRDAAERSLLAGRGLGDARLEADLGHVTSLLERAPRIGAMARLFDEAESTLEARKASGERQSGEQLADLNLYF EVPLMPGTTSERVADLVAALNGLDGVEVAYAEPPPEPAMVNFGMDAAVRSLLAAADLPPVTPLYESNQGYLNAAPGGIDA KYAWTVLGGQGQNVKVVDIEGGWRTTHEDMPDLFHMGGTQYTDQSWRDHGTAVLGEIVGARNAYGVTGIAHQAKAGYESI GAQSTASAITRAATAAGLGGIVLIELHARGPSDGTACSCNTSQCDYIAMEYWQANYDAIKTATANGVIVVEAAGNGSADL DAPAYGSAFNRNTRDSGAIFVGGSTATTRLPMCWTNFGTRVDVHGWGERVYSMGYGNVFGASYGEDQFYTSSFSGTSSAS PIVVGAAASAQGVALANGRRLTSTQMRSLLRANGTPQPANTRQIGPLPDLAKVLPKVIAGDY >Mature_542_residues MWRLSMPMSSLLSMRPLRYAMLSLSVLAFAPSAVAAPPAKSLKPRALAAKPTGRELAGDAYVERIVVKFHEGSRVRLRDQ QLVALSSDRDAAERSLLAGRGLGDARLEADLGHVTSLLERAPRIGAMARLFDEAESTLEARKASGERQSGEQLADLNLYF EVPLMPGTTSERVADLVAALNGLDGVEVAYAEPPPEPAMVNFGMDAAVRSLLAAADLPPVTPLYESNQGYLNAAPGGIDA KYAWTVLGGQGQNVKVVDIEGGWRTTHEDMPDLFHMGGTQYTDQSWRDHGTAVLGEIVGARNAYGVTGIAHQAKAGYESI GAQSTASAITRAATAAGLGGIVLIELHARGPSDGTACSCNTSQCDYIAMEYWQANYDAIKTATANGVIVVEAAGNGSADL DAPAYGSAFNRNTRDSGAIFVGGSTATTRLPMCWTNFGTRVDVHGWGERVYSMGYGNVFGASYGEDQFYTSSFSGTSSAS PIVVGAAASAQGVALANGRRLTSTQMRSLLRANGTPQPANTRQIGPLPDLAKVLPKVIAGDY
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57082; Mature: 57082
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS00138 SUBTILASE_SER ; PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWRLSMPMSSLLSMRPLRYAMLSLSVLAFAPSAVAAPPAKSLKPRALAAKPTGRELAGDA CEECCCCHHHHHHHCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEECCCCCCHHHHHH YVERIVVKFHEGSRVRLRDQQLVALSSDRDAAERSLLAGRGLGDARLEADLGHVTSLLER HHHHHHEEECCCCEEEEECCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH APRIGAMARLFDEAESTLEARKASGERQSGEQLADLNLYFEVPLMPGTTSERVADLVAAL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHH NGLDGVEVAYAEPPPEPAMVNFGMDAAVRSLLAAADLPPVTPLYESNQGYLNAAPGGIDA CCCCCCEEEECCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCEECCCCEEECCCCCCCC KYAWTVLGGQGQNVKVVDIEGGWRTTHEDMPDLFHMGGTQYTDQSWRDHGTAVLGEIVGA EEEEEEECCCCCEEEEEEECCCCCCCHHCCHHHHHCCCCCCCCCCHHHCCHHHHHHHHCC RNAYGVTGIAHQAKAGYESIGAQSTASAITRAATAAGLGGIVLIELHARGPSDGTACSCN CCCCCCCCHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEECC TSQCDYIAMEYWQANYDAIKTATANGVIVVEAAGNGSADLDAPAYGSAFNRNTRDSGAIF CCCCCEEEEHHHHCCCHHHEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEE VGGSTATTRLPMCWTNFGTRVDVHGWGERVYSMGYGNVFGASYGEDQFYTSSFSGTSSAS ECCCCCCEECCEEECCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCC PIVVGAAASAQGVALANGRRLTSTQMRSLLRANGTPQPANTRQIGPLPDLAKVLPKVIAG CEEEEECCCCCCEEEECCCEECHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCC DY CC >Mature Secondary Structure MWRLSMPMSSLLSMRPLRYAMLSLSVLAFAPSAVAAPPAKSLKPRALAAKPTGRELAGDA CEECCCCHHHHHHHCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEECCCCCCHHHHHH YVERIVVKFHEGSRVRLRDQQLVALSSDRDAAERSLLAGRGLGDARLEADLGHVTSLLER HHHHHHEEECCCCEEEEECCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH APRIGAMARLFDEAESTLEARKASGERQSGEQLADLNLYFEVPLMPGTTSERVADLVAAL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHH NGLDGVEVAYAEPPPEPAMVNFGMDAAVRSLLAAADLPPVTPLYESNQGYLNAAPGGIDA CCCCCCEEEECCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCEECCCCEEECCCCCCCC KYAWTVLGGQGQNVKVVDIEGGWRTTHEDMPDLFHMGGTQYTDQSWRDHGTAVLGEIVGA EEEEEEECCCCCEEEEEEECCCCCCCHHCCHHHHHCCCCCCCCCCHHHCCHHHHHHHHCC RNAYGVTGIAHQAKAGYESIGAQSTASAITRAATAAGLGGIVLIELHARGPSDGTACSCN CCCCCCCCHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEECC TSQCDYIAMEYWQANYDAIKTATANGVIVVEAAGNGSADLDAPAYGSAFNRNTRDSGAIF CCCCCEEEEHHHHCCCHHHEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEE VGGSTATTRLPMCWTNFGTRVDVHGWGERVYSMGYGNVFGASYGEDQFYTSSFSGTSSAS ECCCCCCEECCEEECCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCC PIVVGAAASAQGVALANGRRLTSTQMRSLLRANGTPQPANTRQIGPLPDLAKVLPKVIAG CEEEEECCCCCCEEEECCCEECHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCC DY CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA