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The map label for this gene is yncB [H]

Identifier: 108757632

GI number: 108757632

Start: 3714284

End: 3715330

Strand: Reverse

Name: yncB [H]

Synonym: MXAN_3170

Alternate gene names: 108757632

Gene position: 3715330-3714284 (Counterclockwise)

Preceding gene: 108757856

Following gene: 108759357

Centisome position: 40.65

GC content: 67.34

Gene sequence:

>1047_bases
TTGCCAGGGAGGAATCCGTTGAGAGACCTGACCAACCGACGAATCGTGCTCGCATCCCGGCCCGAAGGACGTCCCACTGG
GGAGAACTTCCGCATCGAGGACGTCTCCGTACCGGAGCCCGGCGAAGGTGAGCTCCTGCTGAAGGTCCAGTACCTGTCGC
TGGACCCGTACATGCGAGGCCGGATGAGCACCGCGAAGTCGTACGCCCGCCCACTGGACCTGGGCGAGGTCATCGTCGGC
GGCACCGTCGCCCGCGTCGTCCGCTCCCGACACCCGGGCTACGCGGAAGGCGACATCGTCCTCTCCTACTCGGGCTGGCA
GACCTATTCGCTGTCCAAGGGTGAAGGTCTGCGCAAGCTCGACCCGGCCGCCGCCCCTGTCTCCACCGCGCTGGGCGTGC
TCGGCATGCCGGGATTCACCGCCTACTCGGGCCTCTTCACGATTGGACGGCCTCAGCCCGGTGAGACGGTGGTCGTCGCC
GCGGCCAGCGGTCCTGTCGGCGCGACGGTGGGGCAGTTGGCCAGAATCAAGGGCGCGCGAGCGGTGGGCATCGCGGGCGG
ACCGGAGAAGTGCGCGTACGTGCGTGACGAGCTTGGCTTCGACGCCGTCGTGGACCACCACGCTCCGGACTTCGCCGAGC
GTTTGAAGGAAGCCTGCCCCAAGGGCGTGGACGTTTACTTCGAGAACGTGGGCGGCGCGGTCTGGGACGCCGTCTTCCCG
CTCCTCAATCCGTTCGCGAGAGTCCCCGTCTGCGGCCTCATCGCCTGGTACAACAGCACGGGTCCCTTCGAGGGCCCGAA
CCGGCTGCCCCTCGTCATGCGCGACGTGCTCTCCAAGAGCCTGACGCTGCGAGGCTTCATCCAGACGGAGTTCGTCAGCC
AGCTCCCGGATTTCTACCGGGACATGAGCGCATGGGTGCGCGAGGGACGCGTGCGCTACCGCGAGGACATCGTCAACGGG
CTCGACCATGCGCCCGAGGCCTTCGTCGGGCTGCTGGAAGGCCGCAACTTCGGCAAGCTCGTGGTGAAGGTGGACGAAAC
GGCATGA

Upstream 100 bases:

>100_bases
CGGGCACCATGCGCAGCGCTCACGCGCTTGACCGGTATGGGCATGTCACTCCGGTCACTTCGATTGACGCTCCACGGCAC
GGTCATTAGGGAAGCCGCAC

Downstream 100 bases:

>100_bases
CGGCCGACGCGTGAAGCACCCCCTGCGTGCCCGGAACACTCGGGCACGCAGGGGCAACCTGGCTCAGCTCGGCTTGGCCC
GTACGGACTGGAAGGCCCGC

Product: zinc-binding dehydrogenase family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MPGRNPLRDLTNRRIVLASRPEGRPTGENFRIEDVSVPEPGEGELLLKVQYLSLDPYMRGRMSTAKSYARPLDLGEVIVG
GTVARVVRSRHPGYAEGDIVLSYSGWQTYSLSKGEGLRKLDPAAAPVSTALGVLGMPGFTAYSGLFTIGRPQPGETVVVA
AASGPVGATVGQLARIKGARAVGIAGGPEKCAYVRDELGFDAVVDHHAPDFAERLKEACPKGVDVYFENVGGAVWDAVFP
LLNPFARVPVCGLIAWYNSTGPFEGPNRLPLVMRDVLSKSLTLRGFIQTEFVSQLPDFYRDMSAWVREGRVRYREDIVNG
LDHAPEAFVGLLEGRNFGKLVVKVDETA

Sequences:

>Translated_348_residues
MPGRNPLRDLTNRRIVLASRPEGRPTGENFRIEDVSVPEPGEGELLLKVQYLSLDPYMRGRMSTAKSYARPLDLGEVIVG
GTVARVVRSRHPGYAEGDIVLSYSGWQTYSLSKGEGLRKLDPAAAPVSTALGVLGMPGFTAYSGLFTIGRPQPGETVVVA
AASGPVGATVGQLARIKGARAVGIAGGPEKCAYVRDELGFDAVVDHHAPDFAERLKEACPKGVDVYFENVGGAVWDAVFP
LLNPFARVPVCGLIAWYNSTGPFEGPNRLPLVMRDVLSKSLTLRGFIQTEFVSQLPDFYRDMSAWVREGRVRYREDIVNG
LDHAPEAFVGLLEGRNFGKLVVKVDETA
>Mature_347_residues
PGRNPLRDLTNRRIVLASRPEGRPTGENFRIEDVSVPEPGEGELLLKVQYLSLDPYMRGRMSTAKSYARPLDLGEVIVGG
TVARVVRSRHPGYAEGDIVLSYSGWQTYSLSKGEGLRKLDPAAAPVSTALGVLGMPGFTAYSGLFTIGRPQPGETVVVAA
ASGPVGATVGQLARIKGARAVGIAGGPEKCAYVRDELGFDAVVDHHAPDFAERLKEACPKGVDVYFENVGGAVWDAVFPL
LNPFARVPVCGLIAWYNSTGPFEGPNRLPLVMRDVLSKSLTLRGFIQTEFVSQLPDFYRDMSAWVREGRVRYREDIVNGL
DHAPEAFVGLLEGRNFGKLVVKVDETA

Specific function: Unknown

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226246682, Length=345, Percent_Identity=37.1014492753623, Blast_Score=232, Evalue=3e-61,
Organism=Homo sapiens, GI226246680, Length=345, Percent_Identity=37.1014492753623, Blast_Score=232, Evalue=3e-61,
Organism=Homo sapiens, GI22748929, Length=345, Percent_Identity=37.1014492753623, Blast_Score=232, Evalue=3e-61,
Organism=Homo sapiens, GI226059159, Length=326, Percent_Identity=39.2638036809816, Blast_Score=225, Evalue=6e-59,
Organism=Homo sapiens, GI226059133, Length=326, Percent_Identity=39.2638036809816, Blast_Score=225, Evalue=6e-59,
Organism=Homo sapiens, GI226056130, Length=299, Percent_Identity=38.1270903010033, Blast_Score=187, Evalue=9e-48,
Organism=Homo sapiens, GI28557745, Length=336, Percent_Identity=27.0833333333333, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI194239674, Length=325, Percent_Identity=25.8461538461538, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI13236495, Length=325, Percent_Identity=25.8461538461538, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI22538446, Length=287, Percent_Identity=26.4808362369338, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI22538444, Length=287, Percent_Identity=26.4808362369338, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI18379349, Length=219, Percent_Identity=26.4840182648402, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI226510941, Length=334, Percent_Identity=58.9820359281437, Blast_Score=409, Evalue=1e-115,
Organism=Caenorhabditis elegans, GI133901712, Length=356, Percent_Identity=29.7752808988764, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI133901710, Length=356, Percent_Identity=29.7752808988764, Blast_Score=162, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6323504, Length=337, Percent_Identity=31.7507418397626, Blast_Score=141, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37701; Mature: 37569

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGRNPLRDLTNRRIVLASRPEGRPTGENFRIEDVSVPEPGEGELLLKVQYLSLDPYMRG
CCCCCHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCHHHHH
RMSTAKSYARPLDLGEVIVGGTVARVVRSRHPGYAEGDIVLSYSGWQTYSLSKGEGLRKL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCCCCCCCC
DPAAAPVSTALGVLGMPGFTAYSGLFTIGRPQPGETVVVAAASGPVGATVGQLARIKGAR
CCCCCHHHHHHHHHCCCCHHHHHCEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCC
AVGIAGGPEKCAYVRDELGFDAVVDHHAPDFAERLKEACPKGVDVYFENVGGAVWDAVFP
EEECCCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCCCEEHHHHCCHHHHHHHHH
LLNPFARVPVCGLIAWYNSTGPFEGPNRLPLVMRDVLSKSLTLRGFIQTEFVSQLPDFYR
HHCHHHHCCHHHEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
DMSAWVREGRVRYREDIVNGLDHAPEAFVGLLEGRNFGKLVVKVDETA
HHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEECCC
>Mature Secondary Structure 
PGRNPLRDLTNRRIVLASRPEGRPTGENFRIEDVSVPEPGEGELLLKVQYLSLDPYMRG
CCCCHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCHHHHH
RMSTAKSYARPLDLGEVIVGGTVARVVRSRHPGYAEGDIVLSYSGWQTYSLSKGEGLRKL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCCCCCCCC
DPAAAPVSTALGVLGMPGFTAYSGLFTIGRPQPGETVVVAAASGPVGATVGQLARIKGAR
CCCCCHHHHHHHHHCCCCHHHHHCEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCC
AVGIAGGPEKCAYVRDELGFDAVVDHHAPDFAERLKEACPKGVDVYFENVGGAVWDAVFP
EEECCCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCCCEEHHHHCCHHHHHHHHH
LLNPFARVPVCGLIAWYNSTGPFEGPNRLPLVMRDVLSKSLTLRGFIQTEFVSQLPDFYR
HHCHHHHCCHHHEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
DMSAWVREGRVRYREDIVNGLDHAPEAFVGLLEGRNFGKLVVKVDETA
HHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]