| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757626
Identifier: 108757626
GI number: 108757626
Start: 4649288
End: 4649968
Strand: Reverse
Name: 108757626
Synonym: MXAN_3872
Alternate gene names: NA
Gene position: 4649968-4649288 (Counterclockwise)
Preceding gene: 108762931
Following gene: 108762468
Centisome position: 50.88
GC content: 70.78
Gene sequence:
>681_bases ATGAGCGGACGTCTGGCATTGGTGGTTTTCGGGCTCGTGGGCGTGCCCGCATGTGTGGACCTGGACCCGATGCGGGTGCA GGCGCGTGACGGGGCGTTCGTCGCCAACCCGTACTTCGCGGATGCGCGGTCGATGCGGCCCCTCGTGCCCGGCACGGTGG CGCGCGAGTGGTACTTCCAGGAGGCCGCGTACATCCGCCGGGGCTCTCCGGACGGAGGCTGGGTGGAGGTGGAGCAGCTC CCCGTGCCGATCACACCCGACACGCTTCGGGAGGGGCGCGCCCACTTCGAGACCTGGTGCGCGCCGTGTCACGGACTGCT GGGAGATGGGCAGAGCATCGTCGCGCAGAACATGGGGGCCCGGTCGCCCCCTTCGCTGTATGGCGAGGCGCACTCGCATC CCGAGCATGGAGCGGTGATGCCCGCGGATGCAGGGGAGGGCGCTCGCCCGGTGTCCCCTGGATGGGATGCGCTGCCGCAC TCACCGGGCTTCTACTACTCGGTCATCACCGGAGGTTACGGGTTGATGCCTTCCTACGCGGATGCGCTCACGCCCGAGGC GCGCTGGAAGGTCGTGGCCTGGCTGCGGGTGCTCGCGTACAGCCAGCGCGCGCCGTTGTCCGCCGCGCCCGACGACGCGC GCGAGTCGCTCATGCGGGCACCCGAGGGGGGCACGCCATGA
Upstream 100 bases:
>100_bases GGCTGGCGGTCGCGGTCGACGACGCGGAGGGCGCGGACGCGGCGCAAGGCGCGCTCCGGCGGCTCGGCGCCGAGGTCGTG CTCGCGGTGGAGGGACGTTC
Downstream 100 bases:
>100_bases CGGCCACGGTCCTGACGCGCCTGAACCTGGGGCGACGCGTGGTGTGGGGCGCCGTCGCGGTGGGAGGCCTGGGGCTCCTC GCCACCCTGCTGGGGGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MSGRLALVVFGLVGVPACVDLDPMRVQARDGAFVANPYFADARSMRPLVPGTVAREWYFQEAAYIRRGSPDGGWVEVEQL PVPITPDTLREGRAHFETWCAPCHGLLGDGQSIVAQNMGARSPPSLYGEAHSHPEHGAVMPADAGEGARPVSPGWDALPH SPGFYYSVITGGYGLMPSYADALTPEARWKVVAWLRVLAYSQRAPLSAAPDDARESLMRAPEGGTP
Sequences:
>Translated_226_residues MSGRLALVVFGLVGVPACVDLDPMRVQARDGAFVANPYFADARSMRPLVPGTVAREWYFQEAAYIRRGSPDGGWVEVEQL PVPITPDTLREGRAHFETWCAPCHGLLGDGQSIVAQNMGARSPPSLYGEAHSHPEHGAVMPADAGEGARPVSPGWDALPH SPGFYYSVITGGYGLMPSYADALTPEARWKVVAWLRVLAYSQRAPLSAAPDDARESLMRAPEGGTP >Mature_225_residues SGRLALVVFGLVGVPACVDLDPMRVQARDGAFVANPYFADARSMRPLVPGTVAREWYFQEAAYIRRGSPDGGWVEVEQLP VPITPDTLREGRAHFETWCAPCHGLLGDGQSIVAQNMGARSPPSLYGEAHSHPEHGAVMPADAGEGARPVSPGWDALPHS PGFYYSVITGGYGLMPSYADALTPEARWKVVAWLRVLAYSQRAPLSAAPDDARESLMRAPEGGTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24268; Mature: 24136
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRLALVVFGLVGVPACVDLDPMRVQARDGAFVANPYFADARSMRPLVPGTVAREWYFQ CCCCCEEEEEHHHCCCCCCCCCCCEEEECCCEEEECCCHHCHHCCCCCCCCHHHHHHHHH EAAYIRRGSPDGGWVEVEQLPVPITPDTLREGRAHFETWCAPCHGLLGDGQSIVAQNMGA HHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC RSPPSLYGEAHSHPEHGAVMPADAGEGARPVSPGWDALPHSPGFYYSVITGGYGLMPSYA CCCHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHH DALTPEARWKVVAWLRVLAYSQRAPLSAAPDDARESLMRAPEGGTP HHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure SGRLALVVFGLVGVPACVDLDPMRVQARDGAFVANPYFADARSMRPLVPGTVAREWYFQ CCCCEEEEEHHHCCCCCCCCCCCEEEECCCEEEECCCHHCHHCCCCCCCCHHHHHHHHH EAAYIRRGSPDGGWVEVEQLPVPITPDTLREGRAHFETWCAPCHGLLGDGQSIVAQNMGA HHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC RSPPSLYGEAHSHPEHGAVMPADAGEGARPVSPGWDALPHSPGFYYSVITGGYGLMPSYA CCCHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHH DALTPEARWKVVAWLRVLAYSQRAPLSAAPDDARESLMRAPEGGTP HHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA