| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is czcC [H]
Identifier: 108757618
GI number: 108757618
Start: 1138399
End: 1139661
Strand: Reverse
Name: czcC [H]
Synonym: MXAN_0985
Alternate gene names: 108757618
Gene position: 1139661-1138399 (Counterclockwise)
Preceding gene: 108757229
Following gene: 108758865
Centisome position: 12.47
GC content: 72.21
Gene sequence:
>1263_bases GTGCCCCATCCACTCACGGTGGCAGCCTTCGGGCTCGCCGCCACACTCCTATTTCCGCGTGTCGCCGCGGCCCAGCCGGG CTCCGCCGATGCCGCGCTGTCCCTTGAAGAAACCCTGGTCCTGGCCCGCCAGCGTGCACCCGCGCTGCTGGATGCCGCGG GCCGCGCCGCCGAGGCCCAGGGCCCCGTGGCGGCCGCCAGGTCGCTGCTGAACGACAACCCCACCTTCGAGCTCCAGGCG GGCCCGCGCAGTGCCCCTGGCTCGCCGGGAAACCCCGCCGTGCGTGGGTTGGACTTGAGCGTGGGCATCAGCCAGTCCTT CGAGCTGGGTGGAAAGCGCGGCGCCCGCCGGGAATCCGCGCGCGCCGGTCTGGAGATGGCGACGGCCCACCAGCGCGACG CCGAGCGCCGGGTGCTGGGTGACGTCGCCGCGCGCTTCCTCCAGGCGCTGCATGCGCGGGAGCGGCTGAGCCTCGCGCGA GAAGCCGAGGCCGCCGCCCGGGAGACCGCGAACTCCGCCCAGCGGCGCTTCGAGGCCGGTGATGTGCCCGTGGTGGACGT CAACGTGGCGCGCGTGTCCCTGGCCCGCATGCGCGCGGAGGTGGCCACCGCGGAGGGGGACGAGGCCGTCCAACTCCACC AGTTGCGCGCGATGTTGGGCCTTCCGCTCACACATCCGTTGGCCATCCGCGGTGAGCTGCGAGTGCTCGCGCTCCAGCCT GTCACGGAGGCGAAGACAGACACCGTGGCGGCGCGGCCCGATATCGCCGCGTTGGAAGCGGAGCTCGCCCAGGCGGATGC CGACCGCCGCATGGGCCGGGCGAGCGTCTGGCCAGACATCACCGCGGGGTTTCTGTACCAGCGAGAGATTGATGAAATCG CCTACCTCGGCGCCCTGAGCGTGCCGCTGCCGCTCTTCGACCGGGGAGACAACGCCCGGGTGACGGGCGAGGCCCGCGTG CGCCGGCTCCAATCCCTGCTGGCGGCGGCCCGGTTGGAAGTGGACGTCCAGGTGGAGGCCGCGCGCGTGCAGCACCGCAA GCGGCTGGAAGCCGTGACGCTGCTGGAAGCCGACGCCCTGCCGCTGCTCAGTGACAACGAAAGTCTCGCTCGCCGCTCCT ACGAAGCCGGAGAGATGGGCCTCGCCGAGTTCCTCCTCGTTCGCCGCGACACGCTGGAAGCGCGTGCCGCCTACCTCGAC AGCCTCCTTCAGGCAGCCCTCTCCCGCGTCCAACTGGCCGTGGAGACCGGAGCCCTTCCATGA
Upstream 100 bases:
>100_bases GCCGTCTCGTTCGCTCGTGTCCGCCAGGACGGGTGTGCCCGTGTGTCATCGCGGGGCACGCTCCACCTGACGCACGCCTC CTTTTCGCGAGGTCATCGCC
Downstream 100 bases:
>100_bases AGCCCCTCCACGCCGCAGTGGCCGCCCTCCTCCTGCTCACCGCCTGCAAGCGCGAGACGCCGCACGACGCGCAAGCGCAC GGACATGACGAGCCCCCCGC
Product: putative cobalt-zinc-cadmium resistance protein
Products: NA
Alternate protein names: Cation efflux system protein CzcC [H]
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MPHPLTVAAFGLAATLLFPRVAAAQPGSADAALSLEETLVLARQRAPALLDAAGRAAEAQGPVAAARSLLNDNPTFELQA GPRSAPGSPGNPAVRGLDLSVGISQSFELGGKRGARRESARAGLEMATAHQRDAERRVLGDVAARFLQALHARERLSLAR EAEAAARETANSAQRRFEAGDVPVVDVNVARVSLARMRAEVATAEGDEAVQLHQLRAMLGLPLTHPLAIRGELRVLALQP VTEAKTDTVAARPDIAALEAELAQADADRRMGRASVWPDITAGFLYQREIDEIAYLGALSVPLPLFDRGDNARVTGEARV RRLQSLLAAARLEVDVQVEAARVQHRKRLEAVTLLEADALPLLSDNESLARRSYEAGEMGLAEFLLVRRDTLEARAAYLD SLLQAALSRVQLAVETGALP
Sequences:
>Translated_420_residues MPHPLTVAAFGLAATLLFPRVAAAQPGSADAALSLEETLVLARQRAPALLDAAGRAAEAQGPVAAARSLLNDNPTFELQA GPRSAPGSPGNPAVRGLDLSVGISQSFELGGKRGARRESARAGLEMATAHQRDAERRVLGDVAARFLQALHARERLSLAR EAEAAARETANSAQRRFEAGDVPVVDVNVARVSLARMRAEVATAEGDEAVQLHQLRAMLGLPLTHPLAIRGELRVLALQP VTEAKTDTVAARPDIAALEAELAQADADRRMGRASVWPDITAGFLYQREIDEIAYLGALSVPLPLFDRGDNARVTGEARV RRLQSLLAAARLEVDVQVEAARVQHRKRLEAVTLLEADALPLLSDNESLARRSYEAGEMGLAEFLLVRRDTLEARAAYLD SLLQAALSRVQLAVETGALP >Mature_419_residues PHPLTVAAFGLAATLLFPRVAAAQPGSADAALSLEETLVLARQRAPALLDAAGRAAEAQGPVAAARSLLNDNPTFELQAG PRSAPGSPGNPAVRGLDLSVGISQSFELGGKRGARRESARAGLEMATAHQRDAERRVLGDVAARFLQALHARERLSLARE AEAAARETANSAQRRFEAGDVPVVDVNVARVSLARMRAEVATAEGDEAVQLHQLRAMLGLPLTHPLAIRGELRVLALQPV TEAKTDTVAARPDIAALEAELAQADADRRMGRASVWPDITAGFLYQREIDEIAYLGALSVPLPLFDRGDNARVTGEARVR RLQSLLAAARLEVDVQVEAARVQHRKRLEAVTLLEADALPLLSDNESLARRSYEAGEMGLAEFLLVRRDTLEARAAYLDS LLQAALSRVQLAVETGALP
Specific function: CzcC protein appears to modify the specificity of the system, perhaps by acting on the CzcB protein. When the CzcC protein is added to CzcA and CzcB, the efflux system gains specificity for cadmium and cobalt [H]
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cell outer membrane (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003423 [H]
Pfam domain/function: PF02321 OEP [H]
EC number: NA
Molecular weight: Translated: 44810; Mature: 44678
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHPLTVAAFGLAATLLFPRVAAAQPGSADAALSLEETLVLARQRAPALLDAAGRAAEAQ CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCC GPVAAARSLLNDNPTFELQAGPRSAPGSPGNPAVRGLDLSVGISQSFELGGKRGARRESA CHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCHHHCCCCCCCCHHHH RAGLEMATAHQRDAERRVLGDVAARFLQALHARERLSLAREAEAAARETANSAQRRFEAG HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DVPVVDVNVARVSLARMRAEVATAEGDEAVQLHQLRAMLGLPLTHPLAIRGELRVLALQP CCCEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEECCCEEEEEECC VTEAKTDTVAARPDIAALEAELAQADADRRMGRASVWPDITAGFLYQREIDEIAYLGALS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC VPLPLFDRGDNARVTGEARVRRLQSLLAAARLEVDVQVEAARVQHRKRLEAVTLLEADAL CCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHCCCC PLLSDNESLARRSYEAGEMGLAEFLLVRRDTLEARAAYLDSLLQAALSRVQLAVETGALP CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PHPLTVAAFGLAATLLFPRVAAAQPGSADAALSLEETLVLARQRAPALLDAAGRAAEAQ CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCC GPVAAARSLLNDNPTFELQAGPRSAPGSPGNPAVRGLDLSVGISQSFELGGKRGARRESA CHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCHHHCCCCCCCCHHHH RAGLEMATAHQRDAERRVLGDVAARFLQALHARERLSLAREAEAAARETANSAQRRFEAG HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DVPVVDVNVARVSLARMRAEVATAEGDEAVQLHQLRAMLGLPLTHPLAIRGELRVLALQP CCCEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEECCCEEEEEECC VTEAKTDTVAARPDIAALEAELAQADADRRMGRASVWPDITAGFLYQREIDEIAYLGALS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC VPLPLFDRGDNARVTGEARVRRLQSLLAAARLEVDVQVEAARVQHRKRLEAVTLLEADAL CCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHCCCC PLLSDNESLARRSYEAGEMGLAEFLLVRRDTLEARAAYLDSLLQAALSRVQLAVETGALP CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2678100; 7766206 [H]